Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6321
         (689 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568...    28   6.1  
09_04_0366 + 16970063-16970254,16970697-16970720,16972440-16973591     28   8.0  

>01_06_1801 -
           39954425-39954533,39955289-39955578,39955786-39956838,
           39956998-39957263,39957345-39957420,39957525-39957605,
           39957676-39957831,39958565-39958669,39958761-39959367,
           39959514-39959585,39959802-39959953,39960063-39960240,
           39960642-39960745,39960822-39960953,39961036-39961132,
           39961280-39961407,39961533-39961592,39962799-39962918,
           39963011-39963091,39963173-39963361,39963826-39964024,
           39964177-39964257,39964398-39964588,39965226-39965382,
           39965986-39966119,39966266-39966334,39966434-39966481,
           39966572-39966646,39967112-39967192,39967399-39967461,
           39967564-39967623,39967754-39967795,39968777-39968902,
           39969027-39969176
          Length = 1843

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 218 ISCQCDVIWPQNMAALVLYKRFQCYQVLSIN 310
           I CQ   ++P++ AA +L  +FQ YQ L +N
Sbjct: 228 IFCQLIPLFPKSHAAQILGFKFQYYQRLDVN 258


>09_04_0366 + 16970063-16970254,16970697-16970720,16972440-16973591
          Length = 455

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 424 WVKSKTSFVLRICQVNDMMIFKSCYTDFIKLSFVAKHKDMA 546
           + + +  F+  +C+ ND+++F     D  KL+F A H  MA
Sbjct: 245 FTREELEFIATLCKENDVLLFADEVYD--KLAFEADHISMA 283


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,262,154
Number of Sequences: 37544
Number of extensions: 266949
Number of successful extensions: 428
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)