Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6321
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119099-1|AAM50959.1|  537|Drosophila melanogaster RE01528p pro...    29   6.0  
AE013599-3873|AAF47206.1|  537|Drosophila melanogaster CG4563-PA...    29   6.0  

>AY119099-1|AAM50959.1|  537|Drosophila melanogaster RE01528p
           protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -3

Query: 567 WADGFELRHIFMFCDKRQLYKISVATFKNHHIVYLANSKDETCLRFHPSKSYHICT 400
           W  GF +  + + C   ++  IS  TF     +YL +    TCL   P ++Y + T
Sbjct: 237 WMTGFSITVMNLTCGFTRI--ISRRTFSAETALYLVSKYKVTCLAMAPWQAYELFT 290


>AE013599-3873|AAF47206.1|  537|Drosophila melanogaster CG4563-PA
           protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -3

Query: 567 WADGFELRHIFMFCDKRQLYKISVATFKNHHIVYLANSKDETCLRFHPSKSYHICT 400
           W  GF +  + + C   ++  IS  TF     +YL +    TCL   P ++Y + T
Sbjct: 237 WMTGFSITVMNLTCGFTRI--ISRRTFSAETALYLVSKYKVTCLAMAPWQAYELFT 290


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,654,260
Number of Sequences: 53049
Number of extensions: 493532
Number of successful extensions: 895
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)