Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6318
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ847274-1|ABH10140.1| 914|Homo sapiens epithelial cell transfo... 75 2e-13
BC112086-1|AAI12087.1| 883|Homo sapiens epithelial cell transfo... 75 2e-13
AY376439-1|AAQ83675.1| 882|Homo sapiens epithelial cell transfo... 75 2e-13
AK023267-1|BAB14498.1| 798|Homo sapiens protein ( Homo sapiens ... 75 2e-13
D87448-1|BAA13389.1| 1550|Homo sapiens KIAA0259 protein. 49 2e-05
BC151237-1|AAI51238.1| 1435|Homo sapiens topoisomerase (DNA) II ... 49 2e-05
BC126209-1|AAI26210.2| 1435|Homo sapiens topoisomerase (DNA) II ... 49 2e-05
AB019397-1|BAA34202.1| 1435|Homo sapiens DNA topoisomerase II bi... 49 2e-05
BC032633-1|AAH32633.1| 184|Homo sapiens TOPBP1 protein protein. 48 2e-05
M36089-1|AAA63270.1| 633|Homo sapiens XRCC1 protein. 35 0.31
CR456728-1|CAG33009.1| 633|Homo sapiens XRCC1 protein. 35 0.31
BC023593-1|AAH23593.1| 633|Homo sapiens X-ray repair complement... 35 0.31
AF512504-1|AAM34791.1| 633|Homo sapiens X-ray repair complement... 35 0.31
AC018758-3|AAG09061.1| 464|Homo sapiens XRCC1 DNA repair protei... 35 0.31
AB208781-1|BAD92018.1| 647|Homo sapiens X-ray repair cross comp... 35 0.31
AK123600-1|BAC85657.1| 1035|Homo sapiens mRNA. protein. 33 0.95
AK123044-1|BAC85523.1| 548|Homo sapiens PTIP mRNA. protein. 33 0.95
BC063447-1|AAH63447.1| 867|Homo sapiens CTD (carboxy-terminal d... 31 3.8
BC052576-1|AAH52576.1| 874|Homo sapiens CTDP1 protein protein. 31 3.8
BC015010-1|AAH15010.1| 565|Homo sapiens Unknown (protein for IM... 31 3.8
AF154115-1|AAD42088.1| 961|Homo sapiens RNA polymerase II CTD p... 31 3.8
AF081287-1|AAC64549.1| 842|Homo sapiens serine phosphatase FCP1... 31 3.8
U59299-1|AAC52013.1| 505|Homo sapiens MCT protein. 30 6.7
BC033611-1|AAH33611.1| 505|Homo sapiens solute carrier family 1... 30 6.7
BC009684-1|AAH09684.1| 505|Homo sapiens solute carrier family 1... 30 6.7
AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein... 30 6.7
AK024697-1|BAB14966.1| 309|Homo sapiens protein ( Homo sapiens ... 30 6.7
>DQ847274-1|ABH10140.1| 914|Homo sapiens epithelial cell
transforming sequence 2 oncogene protein splice variant
b protein.
Length = 914
Score = 75.4 bits (177), Expect = 2e-13
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -1
Query: 193 LITLIHYMGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERRDD 20
L+TL+H+MGG IRKD +SKVTHL+A GEK+R A G P++ W+ WERR++
Sbjct: 195 LVTLVHHMGGVIRKDFNSKVTHLVANCTQGEKFRVAVSLGTPIMKPEWIYKAWERRNE 252
>BC112086-1|AAI12087.1| 883|Homo sapiens epithelial cell
transforming sequence 2 oncogene protein.
Length = 883
Score = 75.4 bits (177), Expect = 2e-13
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -1
Query: 193 LITLIHYMGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERRDD 20
L+TL+H+MGG IRKD +SKVTHL+A GEK+R A G P++ W+ WERR++
Sbjct: 164 LVTLVHHMGGVIRKDFNSKVTHLVANCTQGEKFRVAVSLGTPIMKPEWIYKAWERRNE 221
>AY376439-1|AAQ83675.1| 882|Homo sapiens epithelial cell
transforming 2 protein.
Length = 882
Score = 75.4 bits (177), Expect = 2e-13
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -1
Query: 193 LITLIHYMGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERRDD 20
L+TL+H+MGG IRKD +SKVTHL+A GEK+R A G P++ W+ WERR++
Sbjct: 163 LVTLVHHMGGVIRKDFNSKVTHLVANCTQGEKFRVAVSLGTPIMKPEWIYKAWERRNE 220
>AK023267-1|BAB14498.1| 798|Homo sapiens protein ( Homo sapiens
cDNA FLJ13205 fis, clone NT2RP3004534, highly similar to
Mouse oncogene (ect2) mRNA. ).
Length = 798
Score = 75.4 bits (177), Expect = 2e-13
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -1
Query: 193 LITLIHYMGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERRDD 20
L+TL+H+MGG IRKD +SKVTHL+A GEK+R A G P++ W+ WERR++
Sbjct: 164 LVTLVHHMGGVIRKDFNSKVTHLVANCTQGEKFRVAVSLGTPIMKPEWIYKAWERRNE 221
>D87448-1|BAA13389.1| 1550|Homo sapiens KIAA0259 protein.
Length = 1550
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = -1
Query: 181 IHYMGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERRDD 20
+ MGG + +D++ VTHLIA +KY A+ P+L SW+ WE+ +
Sbjct: 156 VQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQE 209
>BC151237-1|AAI51238.1| 1435|Homo sapiens topoisomerase (DNA) II
binding protein 1 protein.
Length = 1435
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = -1
Query: 181 IHYMGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERRDD 20
+ MGG + +D++ VTHLIA +KY A+ P+L SW+ WE+ +
Sbjct: 41 VQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQE 94
>BC126209-1|AAI26210.2| 1435|Homo sapiens topoisomerase (DNA) II
binding protein 1 protein.
Length = 1435
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = -1
Query: 181 IHYMGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERRDD 20
+ MGG + +D++ VTHLIA +KY A+ P+L SW+ WE+ +
Sbjct: 41 VQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQE 94
>AB019397-1|BAA34202.1| 1435|Homo sapiens DNA topoisomerase II
binding protein protein.
Length = 1435
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = -1
Query: 181 IHYMGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERRDD 20
+ MGG + +D++ VTHLIA +KY A+ P+L SW+ WE+ +
Sbjct: 41 VQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQE 94
>BC032633-1|AAH32633.1| 184|Homo sapiens TOPBP1 protein protein.
Length = 184
Score = 48.4 bits (110), Expect = 2e-05
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -1
Query: 181 IHYMGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWER 29
+ MGG + +D++ VTHLIA +KY A+ P+L SW+ WE+
Sbjct: 128 VQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEK 178
>M36089-1|AAA63270.1| 633|Homo sapiens XRCC1 protein.
Length = 633
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 172 MGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERR 26
+G R D + THLI A A KY G G ++ + WV C R
Sbjct: 345 LGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMR 393
>CR456728-1|CAG33009.1| 633|Homo sapiens XRCC1 protein.
Length = 633
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 172 MGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERR 26
+G R D + THLI A A KY G G ++ + WV C R
Sbjct: 345 LGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMR 393
>BC023593-1|AAH23593.1| 633|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 1 protein.
Length = 633
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 172 MGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERR 26
+G R D + THLI A A KY G G ++ + WV C R
Sbjct: 345 LGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMR 393
>AF512504-1|AAM34791.1| 633|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 1 protein.
Length = 633
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 172 MGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERR 26
+G R D + THLI A A KY G G ++ + WV C R
Sbjct: 345 LGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMR 393
>AC018758-3|AAG09061.1| 464|Homo sapiens XRCC1 DNA repair protein
protein.
Length = 464
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 172 MGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERR 26
+G R D + THLI A A KY G G ++ + WV C R
Sbjct: 176 LGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMR 224
>AB208781-1|BAD92018.1| 647|Homo sapiens X-ray repair cross
complementing protein 1 variant protein.
Length = 647
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 172 MGGSIRKDMSSKVTHLIAAAATGEKYRYASGFGLPVLARSWVDACWERR 26
+G R D + THLI A A KY G G ++ + WV C R
Sbjct: 359 LGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMR 407
>AK123600-1|BAC85657.1| 1035|Homo sapiens mRNA. protein.
Length = 1035
Score = 33.1 bits (72), Expect = 0.95
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -1
Query: 193 LITLIHYMGGSIRKDMSSKVTHLIAAAATGEKYRYA-SGFGLPVLARSWVDAC 38
L L+ + GG + ++ K THLI GEKY A + ++ WV C
Sbjct: 83 LWALVTFYGGDCQLTLNKKCTHLIVPEPKGEKYECALKRASIKIVTPDWVLDC 135
>AK123044-1|BAC85523.1| 548|Homo sapiens PTIP mRNA. protein.
Length = 548
Score = 33.1 bits (72), Expect = 0.95
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -1
Query: 193 LITLIHYMGGSIRKDMSSKVTHLIAAAATGEKYRYA-SGFGLPVLARSWVDAC 38
L L+ + GG + ++ K THLI GEKY A + ++ WV C
Sbjct: 26 LWALVTFYGGDCQLTLNKKCTHLIVPEPKGEKYECALKRASIKIVTPDWVLDC 78
>BC063447-1|AAH63447.1| 867|Homo sapiens CTD (carboxy-terminal
domain, RNA polymerase II, polypeptide A) phosphatase,
su protein.
Length = 867
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 151 DMSSKVTHLIAAAATGEKYRYASGFG-LPVLARSWVDACWERRD 23
D + THLIAA A EK A G L V+ W+ +C ER D
Sbjct: 676 DAPDRATHLIAARAGTEKVLQAQECGHLHVVNPDWLWSCLERWD 719
>BC052576-1|AAH52576.1| 874|Homo sapiens CTDP1 protein protein.
Length = 874
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 151 DMSSKVTHLIAAAATGEKYRYASGFG-LPVLARSWVDACWERRD 23
D + THLIAA A EK A G L V+ W+ +C ER D
Sbjct: 589 DAPDRATHLIAARAGTEKVLQAQECGHLHVVNPDWLWSCLERWD 632
>BC015010-1|AAH15010.1| 565|Homo sapiens Unknown (protein for
IMAGE:4864552) protein.
Length = 565
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 151 DMSSKVTHLIAAAATGEKYRYASGFG-LPVLARSWVDACWERRD 23
D + THLIAA A EK A G L V+ W+ +C ER D
Sbjct: 374 DAPDRATHLIAARAGTEKVLQAQECGHLHVVNPDWLWSCLERWD 417
>AF154115-1|AAD42088.1| 961|Homo sapiens RNA polymerase II CTD
phosphatase protein.
Length = 961
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 151 DMSSKVTHLIAAAATGEKYRYASGFG-LPVLARSWVDACWERRD 23
D + THLIAA A EK A G L V+ W+ +C ER D
Sbjct: 676 DAPDRATHLIAARAGTEKVLQAQECGHLHVVNPDWLWSCLERWD 719
>AF081287-1|AAC64549.1| 842|Homo sapiens serine phosphatase FCP1a
protein.
Length = 842
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 151 DMSSKVTHLIAAAATGEKYRYASGFG-LPVLARSWVDACWERRD 23
D + THLIAA A EK A G L V+ W+ +C ER D
Sbjct: 557 DAPDRATHLIAARAGTEKVLQAQECGHLHVVNPDWLWSCLERWD 600
>U59299-1|AAC52013.1| 505|Homo sapiens MCT protein.
Length = 505
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +2
Query: 14 GGVVSPFPARVDPGAREHGQAEPGRVPVLLARSCGRDQVRHLARHVLTDRAAHVVY 181
G ++ P V P +E P + +CGR RHLA +L + VY
Sbjct: 186 GAIIRPVATSVAPETKECPPPPPETPALGCLAACGRTIQRHLAFDILRHNTGYCVY 241
>BC033611-1|AAH33611.1| 505|Homo sapiens solute carrier family 16,
member 5 (monocarboxylic acid transporter 6) protein.
Length = 505
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +2
Query: 14 GGVVSPFPARVDPGAREHGQAEPGRVPVLLARSCGRDQVRHLARHVLTDRAAHVVY 181
G ++ P V P +E P + +CGR RHLA +L + VY
Sbjct: 186 GAIIRPVATSVAPETKECPPPPPETPALGCLAACGRTIQRHLAFDILRHNTGYCVY 241
>BC009684-1|AAH09684.1| 505|Homo sapiens solute carrier family 16,
member 5 (monocarboxylic acid transporter 6) protein.
Length = 505
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +2
Query: 14 GGVVSPFPARVDPGAREHGQAEPGRVPVLLARSCGRDQVRHLARHVLTDRAAHVVY 181
G ++ P V P +E P + +CGR RHLA +L + VY
Sbjct: 186 GAIIRPVATSVAPETKECPPPPPETPALGCLAACGRTIQRHLAFDILRHNTGYCVY 241
>AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein 3
protein.
Length = 1386
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2
Query: 63 SRAPGSTRAGNGETTPPVSLP 1
S APG T GNGE TPP+ P
Sbjct: 1225 SSAPGRTWQGNGEMTPPLQGP 1245
>AK024697-1|BAB14966.1| 309|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21044 fis, clone CAE11659. ).
Length = 309
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2
Query: 63 SRAPGSTRAGNGETTPPVSLP 1
S APG T GNGE TPP+ P
Sbjct: 150 SSAPGRTWQGNGEMTPPLQGP 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,696,323
Number of Sequences: 237096
Number of extensions: 1897290
Number of successful extensions: 7355
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 7193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7355
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -