Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6315
         (643 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3933|AAS64771.1|  229|Drosophila melanogaster CG33228-P...    33   0.25 
BT029651-1|ABL75710.1|   96|Drosophila melanogaster IP17231p pro...    29   5.4  
AY121694-1|AAM52021.1|  468|Drosophila melanogaster RE63354p pro...    29   5.4  
AF011427-1|AAB64300.1|  468|Drosophila melanogaster putative ARF...    29   5.4  
AE014296-2138|AAF49920.1|  468|Drosophila melanogaster CG4237-PA...    29   5.4  
AY118918-1|AAM50778.1|  446|Drosophila melanogaster LD22559p pro...    29   7.1  
AE014297-2416|AAF55475.1|  446|Drosophila melanogaster CG18012-P...    29   7.1  

>AE013599-3933|AAS64771.1|  229|Drosophila melanogaster CG33228-PA
           protein.
          Length = 229

 Score = 33.5 bits (73), Expect = 0.25
 Identities = 10/36 (27%), Positives = 25/36 (69%)
 Frame = +3

Query: 516 NVLYTLAGFIAFHVAVKVLLSKYVIRLYQDGDDYLA 623
           ++ Y + GF+  ++A++  ++KY +R+Y+  + Y+A
Sbjct: 129 DLYYFVGGFLLINLAIRAFVAKYPLRIYKSSEKYVA 164


>BT029651-1|ABL75710.1|   96|Drosophila melanogaster IP17231p
           protein.
          Length = 96

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 158 CNN*LKTMFVNMNCLRAITSTGRYIIKIKSTARCI 262
           CNN    + +N  C + +   G+Y + I   A+CI
Sbjct: 24  CNNDCSRIGINFLCGKTVRKAGKYAVPIGILAKCI 58


>AY121694-1|AAM52021.1|  468|Drosophila melanogaster RE63354p
           protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/63 (19%), Positives = 37/63 (58%)
 Frame = +2

Query: 146 LAIKCNN*LKTMFVNMNCLRAITSTGRYIIKIKSTARCISNHPMKFVEAQDRWREMANVS 325
           + ++C+   +++ V+++ +R++T      I+++      + +  +F+E Q+ W E A ++
Sbjct: 41  ICLECSGKHRSLGVHLSFVRSVTMDKWKDIELEKMKAGGNRNAREFLEDQEDWNERAPIT 100

Query: 326 KRW 334
           +R+
Sbjct: 101 QRY 103


>AF011427-1|AAB64300.1|  468|Drosophila melanogaster putative ARF1
           GTPase activatingprotein protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/63 (19%), Positives = 37/63 (58%)
 Frame = +2

Query: 146 LAIKCNN*LKTMFVNMNCLRAITSTGRYIIKIKSTARCISNHPMKFVEAQDRWREMANVS 325
           + ++C+   +++ V+++ +R++T      I+++      + +  +F+E Q+ W E A ++
Sbjct: 41  ICLECSGKHRSLGVHLSFVRSVTMDKWKDIELEKMKAGGNRNAREFLEDQEDWNERAPIT 100

Query: 326 KRW 334
           +R+
Sbjct: 101 QRY 103


>AE014296-2138|AAF49920.1|  468|Drosophila melanogaster CG4237-PA
           protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/63 (19%), Positives = 37/63 (58%)
 Frame = +2

Query: 146 LAIKCNN*LKTMFVNMNCLRAITSTGRYIIKIKSTARCISNHPMKFVEAQDRWREMANVS 325
           + ++C+   +++ V+++ +R++T      I+++      + +  +F+E Q+ W E A ++
Sbjct: 41  ICLECSGKHRSLGVHLSFVRSVTMDKWKDIELEKMKAGGNRNAREFLEDQEDWNERAPIT 100

Query: 326 KRW 334
           +R+
Sbjct: 101 QRY 103


>AY118918-1|AAM50778.1|  446|Drosophila melanogaster LD22559p
           protein.
          Length = 446

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 534 PRYTIHSIGSLAITTLSPSSTGLFKSAWSKTNI 436
           PR  IH + ++ +T L+P    LFK+ W   ++
Sbjct: 57  PRCRIHELTAVPVTNLTPKLRLLFKAFWQTLSL 89


>AE014297-2416|AAF55475.1|  446|Drosophila melanogaster CG18012-PA
           protein.
          Length = 446

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 534 PRYTIHSIGSLAITTLSPSSTGLFKSAWSKTNI 436
           PR  IH + ++ +T L+P    LFK+ W   ++
Sbjct: 57  PRCRIHELTAVPVTNLTPKLRLLFKAFWQTLSL 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,951,968
Number of Sequences: 53049
Number of extensions: 541663
Number of successful extensions: 1136
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)