Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6315
(643 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 24 1.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 24 1.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 24 1.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 24 1.1
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 1.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 5.8
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 5.8
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 5.8
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 5.8
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 5.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 5.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 5.8
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 5.8
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 340 NIQSANGQCPKLCYNLSYI 396
N + N C KL YN++YI
Sbjct: 101 NNNNYNNNCKKLYYNINYI 119
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 340 NIQSANGQCPKLCYNLSYI 396
N + N C KL YN++YI
Sbjct: 101 NNNNYNNNCKKLYYNINYI 119
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 340 NIQSANGQCPKLCYNLSYI 396
N + N C KL YN++YI
Sbjct: 101 NNNNYNNNCKKLYYNINYI 119
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 340 NIQSANGQCPKLCYNLSYI 396
N + N C KL YN++YI
Sbjct: 101 NNNNYNNNCKKLYYNINYI 119
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 355 NGQCPKLCYNLSYI 396
N C KL YN++YI
Sbjct: 101 NNNCKKLYYNINYI 114
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 355 NGQCPKLCYNLSYI 396
N +LCYN++YI
Sbjct: 96 NNNYKQLCYNINYI 109
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 355 NGQCPKLCYNLSYI 396
N +LCYN++YI
Sbjct: 96 NNNYKQLCYNINYI 109
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 355 NGQCPKLCYNLSYI 396
N +LCYN++YI
Sbjct: 96 NNNYKQLCYNINYI 109
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 355 NGQCPKLCYNLSYI 396
N +LCYN++YI
Sbjct: 96 NNNYKQLCYNINYI 109
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 355 NGQCPKLCYNLSYI 396
N +LCYN++YI
Sbjct: 96 NNNYKQLCYNINYI 109
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 569 YFHSNMECYKACQGIQYI 516
++H E YKA +GI++I
Sbjct: 472 HWHHCPEIYKAIEGIRFI 489
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +1
Query: 193 ELFTCNNVDWKVHNQN*KHGKMYFESPN 276
++ + NN ++K +N N K+Y+ N
Sbjct: 302 KIISSNNYNYKNYNNNYNSKKLYYNIIN 329
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +1
Query: 193 ELFTCNNVDWKVHNQN*KHGKMYFESPN 276
++ + NN ++K +N N K+Y+ N
Sbjct: 313 KIISSNNYNYKNYNNNYNSKKLYYNIIN 340
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,623
Number of Sequences: 438
Number of extensions: 3774
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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