BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6311
(754 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U36583-1|AAA87038.1| 401|Drosophila melanogaster Mei-S332 protein. 32 0.97
AY058633-1|AAL13862.1| 401|Drosophila melanogaster LD33081p pro... 32 0.97
AE013599-3339|AAF46802.1| 401|Drosophila melanogaster CG5303-PA... 32 0.97
AY118762-1|AAM50622.2| 105|Drosophila melanogaster GH09576p pro... 29 6.8
U42768-1|AAC47405.1| 892|Drosophila melanogaster KEK2 precursor... 29 9.0
DQ138836-1|ABA86442.1| 881|Drosophila melanogaster CG4977 protein. 29 9.0
AE014134-2085|AAF53111.1| 894|Drosophila melanogaster CG4977-PA... 29 9.0
>U36583-1|AAA87038.1| 401|Drosophila melanogaster Mei-S332 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.97
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -2
Query: 660 IRRTASLSGCTNSILLRRASNITSNVSATQR 568
+RRT +L+ T I RR+S++TS VS+T R
Sbjct: 106 MRRTCALARTTRPISPRRSSSVTSTVSSTSR 136
>AY058633-1|AAL13862.1| 401|Drosophila melanogaster LD33081p
protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.97
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -2
Query: 660 IRRTASLSGCTNSILLRRASNITSNVSATQR 568
+RRT +L+ T I RR+S++TS VS+T R
Sbjct: 106 MRRTCALARTTRPISPRRSSSVTSTVSSTSR 136
>AE013599-3339|AAF46802.1| 401|Drosophila melanogaster CG5303-PA
protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.97
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -2
Query: 660 IRRTASLSGCTNSILLRRASNITSNVSATQR 568
+RRT +L+ T I RR+S++TS VS+T R
Sbjct: 106 MRRTCALARTTRPISPRRSSSVTSTVSSTSR 136
>AY118762-1|AAM50622.2| 105|Drosophila melanogaster GH09576p
protein.
Length = 105
Score = 29.1 bits (62), Expect = 6.8
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 292 RRTLHRSGQ-GLQRGVHC-RRVQFPGQDGSFAFNRKSAGHSNESVAHN 429
RRTL R GQ L GV R +Q+P Q S R GH + VA N
Sbjct: 41 RRTLRRLGQRDLSSGVQGGRTIQWPLQSQSEVLVRGMLGHPSRRVALN 88
>U42768-1|AAC47405.1| 892|Drosophila melanogaster KEK2 precursor
protein.
Length = 892
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 325 QRGVHCRRVQFPGQDGSFAFNRKSA 399
Q VH V F GQDGSFA++ SA
Sbjct: 627 QVDVHLNPVCFLGQDGSFAYDYSSA 651
>DQ138836-1|ABA86442.1| 881|Drosophila melanogaster CG4977 protein.
Length = 881
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 325 QRGVHCRRVQFPGQDGSFAFNRKSA 399
Q VH V F GQDGSFA++ SA
Sbjct: 622 QVDVHLNPVCFLGQDGSFAYDYSSA 646
>AE014134-2085|AAF53111.1| 894|Drosophila melanogaster CG4977-PA
protein.
Length = 894
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 325 QRGVHCRRVQFPGQDGSFAFNRKSA 399
Q VH V F GQDGSFA++ SA
Sbjct: 629 QVDVHLNPVCFLGQDGSFAYDYSSA 653
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,922,634
Number of Sequences: 53049
Number of extensions: 627837
Number of successful extensions: 2295
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2284
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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