Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6311
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical...    31   0.66 
U23177-4|AAM22055.1|  374|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81091-4|CAD56588.1|  287|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p...    28   8.2  
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p...    28   8.2  
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr...    28   8.2  
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.       28   8.2  

>AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical
           protein Y110A7A.16 protein.
          Length = 1250

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 18/62 (29%), Positives = 35/62 (56%)
 Frame = +2

Query: 500 FLNQEDCVMLKNLSNLASKFFNVRCVADTLEVMLEALRNNIELVQPESDAVRRIVIKMTQ 679
           F++ E    L+++ N+ +    V C + +  V+L+A R N+E +QP     RR V+  T+
Sbjct: 626 FIDAESGKTLEDVRNVEAGCELVACDSQSANVILQAARGNLETIQP-----RRYVMAHTR 680

Query: 680 EI 685
           ++
Sbjct: 681 DL 682


>U23177-4|AAM22055.1|  374|Caenorhabditis elegans Hypothetical
           protein C56G2.7 protein.
          Length = 374

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = +2

Query: 206 SDPLPGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTADEYNSLVRTVLLRL 385
           SD LP SS PR    SSE+D   EP+ + AE  +      N       +N+L R+    +
Sbjct: 187 SDTLPISSVPRGEDASSEAD--CEPSTNAAEEGSSNPLSLNNPAIQQIFNNLGRSQKKEV 244

Query: 386 IEKALATLTN 415
                  L+N
Sbjct: 245 AVSLATALSN 254


>Z81091-4|CAD56588.1|  287|Caenorhabditis elegans Hypothetical
           protein F55H12.5 protein.
          Length = 287

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 341 ADEYNSLVRTVLLRLIEKALATLTNRLHITTIDQLKKFRDYLNSDADAGEFQ 496
           AD   +  R  LL  +    +T + R   TT+   KKF D++NS  ++  F+
Sbjct: 2   ADTVQTNGRASLLAAVNNRASTRSTRKKKTTMLSPKKFCDFINSKTNSKSFE 53


>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical
           protein ZK524.2e protein.
          Length = 1816

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 337
           +P+   S P Y+Y+ +   E D Y     ++ +H+  Q  DY+  +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396


>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 337
           +P+   S P Y+Y+ +   E D Y     ++ +H+  Q  DY+  +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396


>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical
           protein ZK524.2c protein.
          Length = 1475

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 337
           +P+   S P Y+Y+ +   E D Y     ++ +H+  Q  DY+  +
Sbjct: 10  EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 55


>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical
           protein ZK524.2a protein.
          Length = 1813

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 337
           +P+   S P Y+Y+ +   E D Y     ++ +H+  Q  DY+  +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396


>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
           protein ZK524.2e protein.
          Length = 1816

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 337
           +P+   S P Y+Y+ +   E D Y     ++ +H+  Q  DY+  +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396


>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 337
           +P+   S P Y+Y+ +   E D Y     ++ +H+  Q  DY+  +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396


>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical
           protein ZK524.2a protein.
          Length = 1813

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 337
           +P+   S P Y+Y+ +   E D Y     ++ +H+  Q  DY+  +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396


>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical
           protein ZK524.2e protein.
          Length = 1816

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 337
           +P+   S P Y+Y+ +   E D Y     ++ +H+  Q  DY+  +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396


>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 337
           +P+   S P Y+Y+ +   E D Y     ++ +H+  Q  DY+  +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396


>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical
           protein ZK524.2c protein.
          Length = 1475

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 337
           +P+   S P Y+Y+ +   E D Y     ++ +H+  Q  DY+  +
Sbjct: 10  EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 55


>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical
           protein ZK524.2a protein.
          Length = 1813

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 337
           +P+   S P Y+Y+ +   E D Y     ++ +H+  Q  DY+  +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396


>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
          Length = 1815

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 DPLPGSSAPRYMYESS---ESDTYMEPARHTAEHYTDQDKDYNAAY 337
           +P+   S P Y+Y+ +   E D Y     ++ +H+  Q  DY+  +
Sbjct: 351 EPILEHSEPEYVYDQNGYPEEDNYGINPTYSEDHFEGQTNDYSTTH 396


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,852,374
Number of Sequences: 27780
Number of extensions: 318405
Number of successful extensions: 1235
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)