Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6306
(729 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00816-1|CAA68755.1| 2039|Homo sapiens protein ( Human mRNA for ... 31 3.2
X05309-1|CAA28933.1| 1537|Homo sapiens protein ( Human mRNA for ... 31 3.2
L17418-2|AAB60694.1| 2039|Homo sapiens complement receptor 1 pro... 31 3.2
L17418-1|AAB60695.1| 2489|Homo sapiens complement receptor 1 pro... 31 3.2
AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3... 31 3.2
AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3... 31 3.2
AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3... 31 3.2
AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3... 31 3.2
AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3... 31 3.2
AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3... 31 3.2
>Y00816-1|CAA68755.1| 2039|Homo sapiens protein ( Human mRNA for
complement receptor type 1 (CR1, C3b/C4b receptor,
CD35). ).
Length = 2039
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 331 IIKYNNYTKHKKIPFCHKIKCAPLNKVYNDGYVKNN 224
++ NN T KK P C I C P + N + NN
Sbjct: 1499 LVSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNN 1534
>X05309-1|CAA28933.1| 1537|Homo sapiens protein ( Human mRNA for
C3b/C4b receptor (CR1) F allotype. ).
Length = 1537
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 331 IIKYNNYTKHKKIPFCHKIKCAPLNKVYNDGYVKNN 224
++ NN T KK P C I C P + N + NN
Sbjct: 997 LVSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNN 1032
>L17418-2|AAB60694.1| 2039|Homo sapiens complement receptor 1 protein.
Length = 2039
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 331 IIKYNNYTKHKKIPFCHKIKCAPLNKVYNDGYVKNN 224
++ NN T KK P C I C P + N + NN
Sbjct: 1499 LVSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNN 1534
>L17418-1|AAB60695.1| 2489|Homo sapiens complement receptor 1 protein.
Length = 2489
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 331 IIKYNNYTKHKKIPFCHKIKCAPLNKVYNDGYVKNN 224
++ NN T KK P C I C P + N + NN
Sbjct: 1949 LVSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNN 1984
>AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 331 IIKYNNYTKHKKIPFCHKIKCAPLNKVYNDGYVKNN 224
++ NN T KK P C I C P + N + NN
Sbjct: 1499 LVSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNN 1534
>AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 331 IIKYNNYTKHKKIPFCHKIKCAPLNKVYNDGYVKNN 224
++ NN T KK P C I C P + N + NN
Sbjct: 1499 LVSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNN 1534
>AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 331 IIKYNNYTKHKKIPFCHKIKCAPLNKVYNDGYVKNN 224
++ NN T KK P C I C P + N + NN
Sbjct: 1499 LVSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNN 1534
>AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 331 IIKYNNYTKHKKIPFCHKIKCAPLNKVYNDGYVKNN 224
++ NN T KK P C I C P + N + NN
Sbjct: 1499 LVSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNN 1534
>AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 331 IIKYNNYTKHKKIPFCHKIKCAPLNKVYNDGYVKNN 224
++ NN T KK P C I C P + N + NN
Sbjct: 1499 LVSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNN 1534
>AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 331 IIKYNNYTKHKKIPFCHKIKCAPLNKVYNDGYVKNN 224
++ NN T KK P C I C P + N + NN
Sbjct: 1499 LVSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNN 1534
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,415,314
Number of Sequences: 237096
Number of extensions: 1777477
Number of successful extensions: 2317
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2316
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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