Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6300
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    37   7e-04
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    25   1.8  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 36.7 bits (81), Expect = 7e-04
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +3

Query: 555 PYEVKVHVDKPYEVKVKVPTPYTVEKKIPYEVKVPVP 665
           PY ++V+V++P ++ +    P  +EK +PY V+ P P
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYP 233



 Score = 31.9 bits (69), Expect = 0.020
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 552 VPYEVKVHVDKPYEVKVKVPTPYTVEKKIPYEVKVPV 662
           VP+ V + V  P+ VKV +P PY ++  +   +K+P+
Sbjct: 178 VPHPVPIAV--PHYVKVYIPQPYPLQVNVEQPIKIPI 212



 Score = 30.7 bits (66), Expect = 0.047
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 576 VDKPYEVKVKVPTPYTVEKKIPYEVKVPVP 665
           V+KPY ++V+ P P  V KK  +EV VP P
Sbjct: 228 VEKPYPIEVEKPFPVEVLKK--FEVPVPKP 255



 Score = 29.1 bits (62), Expect = 0.14
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 576 VDKPYEVKVKVPTPYTVEKKIPYEVKVPVPQ 668
           V  P   KV VP P+ V   +P+ VKV +PQ
Sbjct: 166 VPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQ 196



 Score = 29.1 bits (62), Expect = 0.14
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
 Frame = +3

Query: 549 KVP-YEV--KVHVDKPYEVKVKVPTPYTVEKKIPYEV----KVPVPQ 668
           K+P Y+V  KV ++KP    V+ P P  VEK  P EV    +VPVP+
Sbjct: 209 KIPIYKVIPKV-IEKPVPYTVEKPYPIEVEKPFPVEVLKKFEVPVPK 254


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 341 AHQNC*GGKEGACSVYSRETRPLY 412
           AHQ+C G  +   +++S    PLY
Sbjct: 48  AHQSCAGAHQSPIAIHSHRAVPLY 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,134
Number of Sequences: 2352
Number of extensions: 11416
Number of successful extensions: 27
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)