Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6300
         (718 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117331-1|AAI17332.1|  346|Homo sapiens selenoprotein V protein.      33   1.4  
AY324825-1|AAP85542.1|  346|Homo sapiens selenoprotein V protein.      33   1.4  
D13633-1|BAA02797.2|  876|Homo sapiens KIAA0008 protein.               30   9.5  
BT007344-1|AAP36008.1|  765|Homo sapiens discs, large homolog 7 ...    30   9.5  
BC016276-1|AAH16276.2|  846|Homo sapiens discs, large homolog 7 ...    30   9.5  
BC010658-1|AAH10658.2|  846|Homo sapiens discs, large homolog 7 ...    30   9.5  
AB076695-1|BAB97376.1|  846|Homo sapiens hepatoma up-regulated p...    30   9.5  

>BC117331-1|AAI17332.1|  346|Homo sapiens selenoprotein V protein.
          Length = 346

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +1

Query: 388 QSRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTP 540
           Q+R  +P  +R    +R   P  +PTPL+   P+ +R    T    L+P+P
Sbjct: 4   QARTPAPSSARTSTSVRASTPTRTPTPLRTPTPVRTRTPIRTLTPVLTPSP 54


>AY324825-1|AAP85542.1|  346|Homo sapiens selenoprotein V protein.
          Length = 346

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +1

Query: 388 QSRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTP 540
           Q+R  +P  +R    +R   P  +PTPL+   P+ +R    T    L+P+P
Sbjct: 4   QARTPAPSSARTSTSVRASTPTRTPTPLRTPTPVRTRTPIRTLTPVLTPSP 54


>D13633-1|BAA02797.2|  876|Homo sapiens KIAA0008 protein.
          Length = 876

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 42  KEEKGTPKAVEEKKQDKRGIYDIGSY 119
           KEEK   K  E++++ KRGI+ +G Y
Sbjct: 128 KEEKQLQKLKEQREKAKRGIFKVGRY 153


>BT007344-1|AAP36008.1|  765|Homo sapiens discs, large homolog 7
           (Drosophila) protein.
          Length = 765

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 42  KEEKGTPKAVEEKKQDKRGIYDIGSY 119
           KEEK   K  E++++ KRGI+ +G Y
Sbjct: 17  KEEKQLQKLKEQREKAKRGIFKVGRY 42


>BC016276-1|AAH16276.2|  846|Homo sapiens discs, large homolog 7
           (Drosophila) protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 42  KEEKGTPKAVEEKKQDKRGIYDIGSY 119
           KEEK   K  E++++ KRGI+ +G Y
Sbjct: 98  KEEKQLQKLKEQREKAKRGIFKVGRY 123


>BC010658-1|AAH10658.2|  846|Homo sapiens discs, large homolog 7
           (Drosophila) protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 42  KEEKGTPKAVEEKKQDKRGIYDIGSY 119
           KEEK   K  E++++ KRGI+ +G Y
Sbjct: 98  KEEKQLQKLKEQREKAKRGIFKVGRY 123


>AB076695-1|BAB97376.1|  846|Homo sapiens hepatoma up-regulated
           protein protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 42  KEEKGTPKAVEEKKQDKRGIYDIGSY 119
           KEEK   K  E++++ KRGI+ +G Y
Sbjct: 98  KEEKQLQKLKEQREKAKRGIFKVGRY 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,004,159
Number of Sequences: 237096
Number of extensions: 1669619
Number of successful extensions: 4263
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4258
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)