Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6297
         (688 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   1.6  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   2.1  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   2.1  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   2.1  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   2.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.8  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   6.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   8.3  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 580 STTDQRESPRGQDKRRSSVPH 642
           ST ++RE  R Q++ R + PH
Sbjct: 590 STVEEREEFRRQERMRYAAPH 610


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 431 TSDPKKITKWVDVNNEEWIQDGSAQSSTPVKIDTLQFVPKN 553
           TS  K I   V   NE    DGS   ST +++  +   P+N
Sbjct: 80  TSTTKIIDGHVVTINETTYTDGSDDYSTLIRVRVIDVRPQN 120


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 431 TSDPKKITKWVDVNNEEWIQDGSAQSSTPVKIDTLQFVPKN 553
           TS  K I   V   NE    DGS   ST +++  +   P+N
Sbjct: 128 TSTTKIIDGHVVTINETTYTDGSDDYSTLIRVRVIDVRPQN 168


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 431 TSDPKKITKWVDVNNEEWIQDGSAQSSTPVKIDTLQFVPKN 553
           TS  K I   V   NE    DGS   ST +++  +   P+N
Sbjct: 128 TSTTKIIDGHVVTINETTYTDGSDDYSTLIRVRVIDVRPQN 168


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 431 TSDPKKITKWVDVNNEEWIQDGSAQSSTPVKIDTLQFVPKN 553
           TS  K I   V   NE    DGS   ST +++  +   P+N
Sbjct: 128 TSTTKIIDGHVVAINETTYTDGSDDYSTLIRVRVIDVRPQN 168


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -2

Query: 564 FGFVFFGTNCNVSILTGVLD*AEPSWIHSSLLTSTHLVIFL 442
           FG ++F  N ++   T      EPS   S+ ++  H+ +F+
Sbjct: 367 FGSIYFLGNYSLVPTTTASPTTEPSTTTSTTISQKHIKVFV 407


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +3

Query: 441 PRRSLSGWTLTTKSGSKMARLNRVRPLKSIHCNSYRKIR 557
           P R +S  + T+      + +  ++P+KS   + +RK+R
Sbjct: 419 PIRKISDCSTTSSLSGDESDVVELQPVKSSKSSGWRKLR 457


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 522 KSIHCNSYRKI 554
           K ++CN+YRK+
Sbjct: 97  KKLYCNNYRKL 107


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 595 RESPRGQDKRRSSVPH 642
           + +PRG+D   S VPH
Sbjct: 91  KHNPRGKDALWSLVPH 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,659
Number of Sequences: 438
Number of extensions: 3717
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)