Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6296
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              24   1.7  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              24   1.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   3.0  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   7.0  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   7.0  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   7.0  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   7.0  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   7.0  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 203 FKTRTVHLAI*IY*KQSIISLLKSDISQLVKLNIYSNFN 87
           FK   V     IY  +++I  L ++ S +   NIY  FN
Sbjct: 79  FKENIVQELTSIYLDENVIKKLVAECSVISDANIYIRFN 117


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 203 FKTRTVHLAI*IY*KQSIISLLKSDISQLVKLNIYSNFN 87
           FK   V     IY  +++I  L ++ S +   NIY  FN
Sbjct: 79  FKENIVQELTSIYLDENVIKKLVAECSVISDANIYIRFN 117


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 557 HPSLEWYTACV 525
           HP++ WY+ CV
Sbjct: 180 HPNVTWYSQCV 190


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 61  SIHQNQTDYKSKSYY 17
           +IH N  +YK   YY
Sbjct: 89  TIHNNNNNYKKLQYY 103


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 61  SIHQNQTDYKSKSYY 17
           +IH N  +YK   YY
Sbjct: 89  TIHNNNNNYKKLQYY 103


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 61  SIHQNQTDYKSKSYY 17
           +IH N  +YK   YY
Sbjct: 89  TIHNNNNNYKKLQYY 103


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 61  SIHQNQTDYKSKSYY 17
           +IH N  +YK   YY
Sbjct: 89  TIHNNNNNYKKLQYY 103


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 61  SIHQNQTDYKSKSYY 17
           +IH N  +YK   YY
Sbjct: 322 TIHNNNNNYKKLQYY 336


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,820
Number of Sequences: 438
Number of extensions: 3662
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)