Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6294
         (812 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0491 - 22680011-22680125,22680210-22680307,22680392-226804...    32   0.47 
03_02_0999 - 13105030-13105434,13105716-13105850,13105933-131061...    32   0.62 
04_04_1129 - 31107892-31110246                                         29   5.8  
07_01_0985 - 8297560-8297610,8297728-8297939,8298327-8298449,829...    28   7.7  
05_04_0277 + 19684956-19686137                                         28   7.7  

>01_05_0491 -
           22680011-22680125,22680210-22680307,22680392-22680472,
           22680564-22680677,22680757-22680823,22680947-22681017,
           22681099-22681236,22681324-22681530,22681630-22681773,
           22681856-22682017,22682117-22682173,22682256-22682348,
           22682425-22682542,22682678-22682817,22683031-22683590,
           22683703-22683805
          Length = 755

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -1

Query: 335 RRPDNIEQNPHVPNLRDPCICADTRDILIKTKNSEIYLSVGLNRPIPASFLYKLYV 168
           R  D  E N  +P L DP      +++LIK  + ++  S+G  RPI A  +Y+  +
Sbjct: 333 RGVDIHENNSQLPGLNDPEAEKQQQELLIKCISEDLGFSIG--RPIAAYLIYRCLI 386


>03_02_0999 -
           13105030-13105434,13105716-13105850,13105933-13106133,
           13106374-13106673,13106764-13106964,13107246-13107410,
           13107484-13107663,13108171-13108212,13108327-13108404
          Length = 568

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 18/84 (21%), Positives = 36/84 (42%)
 Frame = +1

Query: 505 EPVSKKYGPTRGERAEDRHSDRDSPGAAACPLRVNKKRKTQSTSEEEPILCPKTAIEISE 684
           E  +K+ G   GE+ + +   ++S  + A      KK+K  S   EEP +      +  +
Sbjct: 473 EKTTKEDGDQEGEKKKKKKKSKESEESPAADADGGKKKKKTSKESEEPPVATTEGEKKEK 532

Query: 685 GSTVHQSPQLSDDAVLEGDEVNRQ 756
                   Q ++D  +E +E  ++
Sbjct: 533 KKKKKSDSQDAEDVAMETEESGKK 556


>04_04_1129 - 31107892-31110246
          Length = 784

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = -1

Query: 593 QAAAPGLSLSECRSSALSPLVGPYFFETGSPSPLRYESGLMLAASSEEFEDKSDDRSSIF 414
           +AA PG   +    S+  PL  P      +   LR+ SG  L+A+      + D    + 
Sbjct: 64  RAAVPGADATILSGSSAHPLPRPAAAARLAALALRFRSGPSLSAALSALPSQPDPALLLL 123

Query: 413 TVSWLPSS 390
             S LP+S
Sbjct: 124 AASSLPAS 131


>07_01_0985 -
           8297560-8297610,8297728-8297939,8298327-8298449,
           8298763-8298817,8299940-8300077,8300187-8300261,
           8300339-8300398,8301335-8301392,8301948-8302054,
           8302484-8302558,8302643-8302838,8304222-8304301,
           8308887-8309757,8310672-8310679
          Length = 702

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 625 QSTSEEEPILCPK-TAIEISEGSTVHQSPQLSDDAVLEGDEVNRQV 759
           +   EEEP LCP    +E+   S+       S D+  + D+++ Q+
Sbjct: 221 EENEEEEPQLCPNCDPLEVDSDSSYDSDAAASSDSEYDCDDLDDQI 266


>05_04_0277 + 19684956-19686137
          Length = 393

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 800 LFLVAFCFMPSTEATCRLTSSPSRTASSDNCGDW 699
           L L+  C +P   A C L +  + T  +D C +W
Sbjct: 358 LCLMYNCMVPPVYAPCPLKAGSTNTRPADQCPEW 391


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,731,933
Number of Sequences: 37544
Number of extensions: 490961
Number of successful extensions: 1504
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)