Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6294
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 32 0.42
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical pr... 29 3.0
AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin syntha... 29 3.0
Z81530-8|CAB04305.2| 329|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical pr... 28 6.9
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 28 6.9
Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical pr... 28 9.1
U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical pr... 28 9.1
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 28 9.1
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 28 9.1
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 28 9.1
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 28 9.1
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 28 9.1
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 28 9.1
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 32.3 bits (70), Expect = 0.42
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 499 EGEPVSKKYGPTRGERAEDRHSDRDSPGAAACPLRVNKKRKTQSTSEEE 645
EG ++ G RG R R S GA P + +K+K +S SE+E
Sbjct: 61 EGGESTRGGGTGRGGRGRPRGSKNSDGGAGGPPAKRGRKKKAKSESEDE 109
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 580 GAAACPLRVNKKRKTQSTSEEEPILCPKTAIEISEGSTVHQSPQLSDD-AVLEGDEVNRQ 756
G P+ + +RK STSE P P T S+ S V + + + +L+ DE+N
Sbjct: 711 GTNGSPISTSPRRKANSTSEPSP---PNTGNLKSDDSIVMLNTEEKEKLGILDFDEMNMS 767
Query: 757 VASVEGMKQNATRNSTS 807
++S + A S
Sbjct: 768 ISSNSSIHGEAAMTEDS 784
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 580 GAAACPLRVNKKRKTQSTSEEEPILCPKTAIEISEGSTVHQSPQLSDD-AVLEGDEVNRQ 756
G P+ + +RK STSE P P T S+ S V + + + +L+ DE+N
Sbjct: 837 GTNGSPISTSPRRKANSTSEPSP---PNTGNLKSDDSIVMLNTEEKEKLGILDFDEMNMS 893
Query: 757 VASVEGMKQNATRNSTS 807
++S + A S
Sbjct: 894 ISSNSSIHGEAAMTEDS 910
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical protein
F16A11.3c protein.
Length = 1046
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 580 GAAACPLRVNKKRKTQSTSEEEPILCPKTAIEISEGSTVHQSPQLSDD-AVLEGDEVNRQ 756
G P+ + +RK STSE P P T S+ S V + + + +L+ DE+N
Sbjct: 837 GTNGSPISTSPRRKANSTSEPSP---PNTGNLKSDDSIVMLNTEEKEKLGILDFDEMNMS 893
Query: 757 VASVEGMKQNATRNSTS 807
++S + A S
Sbjct: 894 ISSNSSIHGEAAMTEDS 910
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 580 GAAACPLRVNKKRKTQSTSEEEPILCPKTAIEISEGSTVHQSPQLSDD-AVLEGDEVNRQ 756
G P+ + +RK STSE P P T S+ S V + + + +L+ DE+N
Sbjct: 711 GTNGSPISTSPRRKANSTSEPSP---PNTGNLKSDDSIVMLNTEEKEKLGILDFDEMNMS 767
Query: 757 VASVEGMKQNATRNSTS 807
++S + A S
Sbjct: 768 ISSNSSIHGEAAMTEDS 784
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 580 GAAACPLRVNKKRKTQSTSEEEPILCPKTAIEISEGSTVHQSPQLSDD-AVLEGDEVNRQ 756
G P+ + +RK STSE P P T S+ S V + + + +L+ DE+N
Sbjct: 837 GTNGSPISTSPRRKANSTSEPSP---PNTGNLKSDDSIVMLNTEEKEKLGILDFDEMNMS 893
Query: 757 VASVEGMKQNATRNSTS 807
++S + A S
Sbjct: 894 ISSNSSIHGEAAMTEDS 910
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical protein
F16A11.3c protein.
Length = 1046
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 580 GAAACPLRVNKKRKTQSTSEEEPILCPKTAIEISEGSTVHQSPQLSDD-AVLEGDEVNRQ 756
G P+ + +RK STSE P P T S+ S V + + + +L+ DE+N
Sbjct: 837 GTNGSPISTSPRRKANSTSEPSP---PNTGNLKSDDSIVMLNTEEKEKLGILDFDEMNMS 893
Query: 757 VASVEGMKQNATRNSTS 807
++S + A S
Sbjct: 894 ISSNSSIHGEAAMTEDS 910
>Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical protein
T25G3.2 protein.
Length = 1322
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 611 KNEKRKAHRKKNQYYVRKRLSKFQKEVQYTNRHSYLTT 724
+ EKR+ + + + + + K QKE+Q NR+ ++T+
Sbjct: 1063 EKEKREEETQTADFPIEENVEKTQKEIQKANRYVWMTS 1100
>AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin synthase 1
protein.
Length = 1322
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 611 KNEKRKAHRKKNQYYVRKRLSKFQKEVQYTNRHSYLTT 724
+ EKR+ + + + + + K QKE+Q NR+ ++T+
Sbjct: 1063 EKEKREEETQTADFPIEENVEKTQKEIQKANRYVWMTS 1100
>Z81530-8|CAB04305.2| 329|Caenorhabditis elegans Hypothetical
protein F36D1.3 protein.
Length = 329
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 664 FSDIILVLLPMCFAFFVFYLLSKDRLLLLGYPCQSADLLLFPLSLGHTFSKRAHLL 497
FS I V+LP CF FF+ + L YP + ++F L L ++ HLL
Sbjct: 151 FSLPITVILPCCFTFFMVPAVGHCTQLTAPYPMGA---VMFTLDLKVRINEYTHLL 203
>Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical
protein T18D3.1 protein.
Length = 523
Score = 28.3 bits (60), Expect = 6.9
Identities = 25/93 (26%), Positives = 41/93 (44%)
Frame = +2
Query: 416 KSKNDRPIYLRILQTTLPTSARTRTAMEKVSPFRKSMAQREGKEQKIGTLTGIAQEQQPV 595
K K+D P T+ +S++ T E+ + K + E K +K G +E++P
Sbjct: 409 KDKHDIPSTSSAASTSSSSSSKHETKEERKARKEKERERAEKKAKK--EKDGHREEEKP- 465
Query: 596 L*E*IKNEKRKAHRKKNQYYVRKRLSKFQKEVQ 694
+K K H + + RKR K +KE Q
Sbjct: 466 ------KKKDKKHETEEERAERKRKEKKEKERQ 492
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 526 GPTRGERAEDRHSDRDSPGAAACP 597
GPT G+ D PGAA CP
Sbjct: 168 GPTGGQGGPGEQGDAGRPGAAGCP 191
>Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical
protein T23G7.3 protein.
Length = 339
Score = 27.9 bits (59), Expect = 9.1
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 479 RTRTAMEKVSPFRKSMAQREGKEQKIGTLTGIAQEQQPVL*E*IKNEKRKAHRKKNQYYV 658
+ R EK R QR+ KE+ + T+ I + +Q V E I E +A RK+ +
Sbjct: 242 KARRKAEKKERKRLRREQRD-KEETLETVETILEVKQEVKEEIIDEEFDEAERKRLK-KE 299
Query: 659 RKRLSKFQKEVQYTN 703
+KRL + +++ Q N
Sbjct: 300 KKRLKRLREQQQPEN 314
>U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical
protein F31F7.2 protein.
Length = 689
Score = 27.9 bits (59), Expect = 9.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 617 EKRKAHRKKNQYYVRKRLSKFQKEVQYTNRHS 712
E + RK+N+Y+ + ++ QK++ Y +H+
Sbjct: 314 ESERQLRKQNEYFTSQLHTEMQKQITYGEKHA 345
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 617 EKRKAHRKKNQYYVRKRLSKFQKEVQYTNRHSYLTT 724
EK +RKKN + L+K + + YT R +TT
Sbjct: 753 EKEAMNRKKNHLLSSETLAKLTQPMYYTTREPEVTT 788
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 617 EKRKAHRKKNQYYVRKRLSKFQKEVQYTNRHSYLTT 724
EK +RKKN + L+K + + YT R +TT
Sbjct: 753 EKEAMNRKKNHLLSSETLAKLTQPMYYTTREPEVTT 788
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 617 EKRKAHRKKNQYYVRKRLSKFQKEVQYTNRHSYLTT 724
EK +RKKN + L+K + + YT R +TT
Sbjct: 753 EKEAMNRKKNHLLSSETLAKLTQPMYYTTREPEVTT 788
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 617 EKRKAHRKKNQYYVRKRLSKFQKEVQYTNRHSYLTT 724
EK +RKKN + L+K + + YT R +TT
Sbjct: 753 EKEAMNRKKNHLLSSETLAKLTQPMYYTTREPEVTT 788
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 27.9 bits (59), Expect = 9.1
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 3/96 (3%)
Frame = +1
Query: 505 EPVSKKYGPTRGERAEDRHSDRDSPGAAACPLRVNKKRKTQSTSEEEPILCPKTAIEI-- 678
EPV+KK ++ D + P + T EE P KT +
Sbjct: 132 EPVAKKQKKEESSDDDEDSEDGEEPEGNNGAVEAEDSDSTDE-EEETPSKPNKTVAQSTL 190
Query: 679 -SEGSTVHQSPQLSDDAVLEGDEVNRQVASVEGMKQ 783
S G + +L DD E E+ RQ+A + K+
Sbjct: 191 KSNGKIDKEIQKLEDDEDNESPEIRRQIALLRLQKK 226
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 27.9 bits (59), Expect = 9.1
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 3/96 (3%)
Frame = +1
Query: 505 EPVSKKYGPTRGERAEDRHSDRDSPGAAACPLRVNKKRKTQSTSEEEPILCPKTAIEI-- 678
EPV+KK ++ D + P + T EE P KT +
Sbjct: 150 EPVAKKQKKEESSDDDEDSEDGEEPEGNNGAVEAEDSDSTDE-EEETPSKPNKTVAQSTL 208
Query: 679 -SEGSTVHQSPQLSDDAVLEGDEVNRQVASVEGMKQ 783
S G + +L DD E E+ RQ+A + K+
Sbjct: 209 KSNGKIDKEIQKLEDDEDNESPEIRRQIALLRLQKK 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,315,980
Number of Sequences: 27780
Number of extensions: 427582
Number of successful extensions: 1315
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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