Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6289
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   3.0  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   5.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   5.3  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   5.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   5.3  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   7.0  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 339 LVGRRAYGPPDGEWLPL 289
           L+G R   PP  +W PL
Sbjct: 408 LIGSRRTSPPPEDWKPL 424


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 86  RTTWSHCGHPQCVSRDL 136
           R TW+ CG P+ V+ ++
Sbjct: 520 RKTWTFCGTPEYVAPEV 536


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 48 YHRTAHHRE*SSSVLPG 98
          YH+  HH++  SS  PG
Sbjct: 9  YHQQFHHQQLFSSANPG 25


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +1

Query: 70  GSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 183
           G+ VH +YL PL +   +   S     +  W +  +++
Sbjct: 212 GASVHYHYLSPLSAGLFQGGISISGTALNCWTQTENSL 249


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +1

Query: 70  GSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 183
           G+ VH +YL PL +   +   S     +  W +  +++
Sbjct: 83  GASVHYHYLSPLSAGLFQGGISISGTALNCWTQTENSL 120


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +1

Query: 70  GSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 183
           G+ VH +YL PL +   +   S     +  W +  +++
Sbjct: 212 GASVHYHYLSPLSAGLFQGGISISGTALNCWTQTENSL 249


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 315 PPDGEWLPLPMDFSNARG 262
           PPD  W P  + F+NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,861
Number of Sequences: 438
Number of extensions: 4786
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)