Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6284
(302 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori... 99 2e-20
UniRef50_Q8T107 Cluster: Putative uncharacterized protein Bmhig;... 71 4e-12
UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera... 62 2e-09
UniRef50_Q6YBU8 Cluster: Reverse transcriptase/integrase; n=1; L... 56 1e-07
UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-direct... 44 9e-04
UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetic... 42 0.003
UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|R... 38 0.033
UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles g... 37 0.10
UniRef50_UPI0001555A96 Cluster: PREDICTED: similar to BoWC1.1, p... 34 0.54
UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles g... 34 0.54
UniRef50_UPI0000E805B8 Cluster: PREDICTED: similar to CD163; n=1... 33 0.95
UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetic... 33 0.95
UniRef50_A0TPN0 Cluster: Putative uncharacterized protein; n=2; ... 33 0.95
UniRef50_A0JRI3 Cluster: Amino acid permease-associated region p... 33 0.95
UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles g... 33 0.95
UniRef50_UPI0000EBC405 Cluster: PREDICTED: hypothetical protein;... 33 1.3
UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles g... 33 1.3
UniRef50_Q4QGQ1 Cluster: Putative uncharacterized protein; n=3; ... 33 1.3
UniRef50_Q4DN30 Cluster: Putative uncharacterized protein; n=3; ... 33 1.3
UniRef50_UPI0000E805BC Cluster: PREDICTED: similar to scavenger ... 33 1.7
UniRef50_UPI0000E805B9 Cluster: PREDICTED: similar to scavenger ... 33 1.7
UniRef50_A1UDQ5 Cluster: Twin-arginine translocation pathway sig... 33 1.7
UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1... 33 1.7
UniRef50_A1YZN4 Cluster: Tegument/envelope protein; n=1; Duck en... 32 2.9
UniRef50_Q24YF3 Cluster: Putative uncharacterized protein; n=3; ... 32 2.9
UniRef50_Q092K6 Cluster: Glutamate--cysteine ligase; n=2; Cystob... 32 2.9
UniRef50_A0LL02 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 32 2.9
UniRef50_A7HCT3 Cluster: Cell surface receptor IPT/TIG domain pr... 31 3.8
UniRef50_A6PRJ4 Cluster: Alpha-L-arabinofuranosidase-like protei... 31 3.8
UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles g... 31 3.8
UniRef50_UPI000155512F Cluster: PREDICTED: hypothetical protein;... 31 5.1
UniRef50_Q8DJH0 Cluster: Tsr1255 protein; n=1; Synechococcus elo... 31 5.1
UniRef50_A3MCE4 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_A1B0V9 Cluster: Alpha/beta hydrolase fold precursor; n=... 31 5.1
UniRef50_Q9ZPI0 Cluster: F15P23.2 protein; n=7; Magnoliophyta|Re... 31 5.1
UniRef50_Q6Z074 Cluster: Putative uncharacterized protein P0412D... 31 5.1
UniRef50_O44317 Cluster: Reverse transcriptase; n=1; Dugesiella ... 31 5.1
UniRef50_Q0CBT5 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_Q03272 Cluster: Retrovirus-related Pol polyprotein from... 31 5.1
UniRef50_UPI00015B47DE Cluster: PREDICTED: similar to has homolo... 31 6.7
UniRef50_UPI0000EBE980 Cluster: PREDICTED: hypothetical protein;... 31 6.7
UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetic... 31 6.7
UniRef50_Q4T6D8 Cluster: Chromosome undetermined SCAF8805, whole... 31 6.7
UniRef50_A0LM48 Cluster: SMC domain protein; n=1; Syntrophobacte... 31 6.7
UniRef50_Q9GRH4 Cluster: CDC2L5 protein kinase; n=4; Eukaryota|R... 31 6.7
UniRef50_UPI0000D9DC2C Cluster: PREDICTED: hypothetical protein;... 30 8.8
UniRef50_UPI0000D9BA5E Cluster: PREDICTED: hypothetical protein;... 30 8.8
UniRef50_UPI000023DE5A Cluster: predicted protein; n=1; Gibberel... 30 8.8
UniRef50_Q9I9F1 Cluster: 5-methylcytosine G/T mismatch-specific ... 30 8.8
UniRef50_A7J655 Cluster: Putative uncharacterized protein n001L;... 30 8.8
UniRef50_Q1YMP4 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_A6TAQ2 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_Q4DUC5 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_Q1DKF2 Cluster: Predicted protein; n=1; Coccidioides im... 30 8.8
UniRef50_A6QVW4 Cluster: Predicted protein; n=1; Ajellomyces cap... 30 8.8
UniRef50_P25316 Cluster: Uncharacterized 12.3 kDa protein in nif... 30 8.8
>UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori|Rep:
Reverse transcriptase - Bombyx mori (Silk moth)
Length = 1076
Score = 99.1 bits (236), Expect = 2e-20
Identities = 45/52 (86%), Positives = 45/52 (86%)
Frame = +1
Query: 145 HTLVACPAWEGWRRVLVAKIGTDLSLPSVVASMLGDDESWKAMLDFCECTIS 300
HTL CPAWE RRVLVAKIG DLSLP VVASMLG DESWKAMLDFCECTIS
Sbjct: 989 HTLAVCPAWEVQRRVLVAKIGPDLSLPGVVASMLGSDESWKAMLDFCECTIS 1040
Score = 72.1 bits (169), Expect = 2e-12
Identities = 39/71 (54%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +3
Query: 18 GRLTFRLTQVLTGHGCFGEFLHRITAEPTAECHH-GCDLDTVLAYARRLPRMGGVAPCPR 194
GRLTFRL QVLTGHGCFG++L RI AEPT CHH G DLDT +A CP
Sbjct: 946 GRLTFRLVQVLTGHGCFGKYLRRIGAEPTTRCHHCGHDLDTA---------EHTLAVCPA 996
Query: 195 RKNRNRLVVAK 227
+ + R++VAK
Sbjct: 997 WEVQRRVLVAK 1007
>UniRef50_Q8T107 Cluster: Putative uncharacterized protein Bmhig;
n=1; Bombyx mori|Rep: Putative uncharacterized protein
Bmhig - Bombyx mori (Silk moth)
Length = 786
Score = 71.3 bits (167), Expect = 4e-12
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = -3
Query: 300 RDGALAEVEHRLPRLVVAEHRCHNTWQRQVGSYFCDEDTAPPLPCGAGDERMLKQ 136
RDG LAEV+H LPR V A+HR H+ QRQV SY CD+DTA LP A ERML++
Sbjct: 220 RDGTLAEVKHSLPRHVAAKHRHHDARQRQVRSYLCDKDTALHLPSEADSERMLRR 274
Score = 37.5 bits (83), Expect = 0.058
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = -1
Query: 128 VATMVALCRRLGCDPVQELTETTMPSEHLREPESEASS 15
V+TMVA RRL VQ L E +PS+HL + E E+SS
Sbjct: 278 VSTMVAPRRRLSSYLVQVLPEAFVPSQHLHQTEGESSS 315
>UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera|Rep:
Reverse transcriptase - Papilio xuthus
Length = 1053
Score = 62.1 bits (144), Expect = 2e-09
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +1
Query: 145 HTLVACPAWEGWRRVLVAKIGTDLSLPSVVASMLGDDESWKAMLDFCECTIS 300
HTL CPAW RR LVA +G DLSLP+ V SM+ D +W+A+ +CE ++
Sbjct: 967 HTLAECPAWTEQRRDLVAAVGDDLSLPATVRSMVESDGAWRAVQTYCEAVMT 1018
Score = 59.7 bits (138), Expect = 1e-08
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +3
Query: 18 GRLTFRLTQVLTGHGCFGEFLHRITAEPTAECHHGCD 128
G +TFRL QVL+GHGCFG +L RI EP+A CHH CD
Sbjct: 923 GAVTFRLAQVLSGHGCFGSYLRRIGREPSAVCHH-CD 958
>UniRef50_Q6YBU8 Cluster: Reverse transcriptase/integrase; n=1;
Lymantria dispar|Rep: Reverse transcriptase/integrase -
Lymantria dispar (Gypsy moth)
Length = 136
Score = 56.4 bits (130), Expect = 1e-07
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = +3
Query: 18 GRLTFRLTQVLTGHGCFGEFLHRIT-AEPTAECHH-GCDLDT 137
G +FRL QVLTGHGCFG++LH+I E T CHH CD DT
Sbjct: 9 GVFSFRLVQVLTGHGCFGKYLHKIVRRESTPFCHHCSCDEDT 50
Score = 39.1 bits (87), Expect = 0.019
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +1
Query: 145 HTLVACPAWEGWRRVLVAKIGTDLSL 222
HTL C AWEG RR LVA IG DL+L
Sbjct: 53 HTLEECAAWEGERRELVAIIGADLAL 78
>UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 932
Score = 43.6 bits (98), Expect = 9e-04
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = +3
Query: 15 RGRLTFRLTQVLTGHGCFGEFLHRITAEPTAEC 113
+G F LTQ LTGHGCFG +LHRI C
Sbjct: 822 QGHTDFYLTQALTGHGCFGTYLHRIGKTADERC 854
>UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 973
Score = 41.9 bits (94), Expect = 0.003
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +3
Query: 18 GRLTFRLTQVLTGHGCFGEFLHRITAEPTAECHHGCDLDT 137
G + + LTQ LTGHGCFG +L RI A C + + DT
Sbjct: 865 GEIDYHLTQALTGHGCFGTYLCRIGKILNASCWYCGEEDT 904
>UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|Rep:
Reverse transcriptase - Anopheles gambiae (African
malaria mosquito)
Length = 1049
Score = 38.3 bits (85), Expect = 0.033
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 18 GRLTFRLTQVLTGHGCFGEFLHRITAEPTAEC 113
G + + +TQVL+GHGCF +LHR ++ C
Sbjct: 940 GDVDYFVTQVLSGHGCFRSYLHRFNRASSSRC 971
>UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1248
Score = 36.7 bits (81), Expect = 0.10
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 15 RGRLTFRLTQVLTGHGCFGEFLHRITAEPTAEC 113
RG + F L Q+L+GH F EFLH P+ EC
Sbjct: 915 RGEVDFLLAQILSGHRFFREFLHVCGFAPSPEC 947
>UniRef50_UPI0001555A96 Cluster: PREDICTED: similar to BoWC1.1,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to BoWC1.1, partial - Ornithorhynchus anatinus
Length = 473
Score = 34.3 bits (75), Expect = 0.54
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 170 HAGQATSVC*NSVQVATMVALCRRLGC 90
H G SVC NS+ V T+ +CR+LGC
Sbjct: 235 HNGTWGSVCSNSMPVVTVAVICRQLGC 261
>UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 973
Score = 34.3 bits (75), Expect = 0.54
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 18 GRLTFRLTQVLTGHGCFGEFLHRITAEPTAEC 113
G + F +TQ L+ HGCF +LH+ + +C
Sbjct: 877 GEVNFYMTQFLSDHGCFRSYLHKYRHASSPDC 908
>UniRef50_UPI0000E805B8 Cluster: PREDICTED: similar to CD163; n=1;
Gallus gallus|Rep: PREDICTED: similar to CD163 - Gallus
gallus
Length = 779
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 170 HAGQATSVC*NSVQVATMVALCRRLGCDPVQELTE 66
H G VC N AT A+CR+LGC LT+
Sbjct: 523 HEGTWGRVCANGTSPATATAVCRQLGCGTAGSLTD 557
>UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to Hypothetical 115 kDa protein in
type I retrotransposable element R1DM (ORF 2), partial -
Tribolium castaneum
Length = 2033
Score = 33.5 bits (73), Expect = 0.95
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +3
Query: 18 GRLTFRLTQVLTGHGCFGEFLHRITAEPTAEC 113
G L + LTQ LTGHG F +L I P EC
Sbjct: 1516 GTLNYYLTQFLTGHGNFRSYLSGIQRCPDDEC 1547
>UniRef50_A0TPN0 Cluster: Putative uncharacterized protein; n=2;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia cenocepacia MC0-3
Length = 689
Score = 33.5 bits (73), Expect = 0.95
Identities = 27/93 (29%), Positives = 33/93 (35%)
Frame = +3
Query: 15 RGRLTFRLTQVLTGHGCFGEFLHRITAEPTAECHHGCDLDTVLAYARRLPRMGGVAPCPR 194
R R RL G R +C G L A ARR + P
Sbjct: 491 RARADGRLADAAAEAAHDGPVARRAVVGRRRDCRVGAHLYAAAAVARRREELPLGVRRPE 550
Query: 195 RKNRNRLVVAKCCGIDARRRRVVEGDARLLRVH 293
R +R R+ + G AR RR+ DA LL H
Sbjct: 551 RASRTRMERRRLHGEPARARRIGSADAVLLLRH 583
>UniRef50_A0JRI3 Cluster: Amino acid permease-associated region
precursor; n=2; Arthrobacter|Rep: Amino acid
permease-associated region precursor - Arthrobacter sp.
(strain FB24)
Length = 485
Score = 33.5 bits (73), Expect = 0.95
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = -1
Query: 278 SSIAFHDSSSPSIDATTLGNDKSVPIFATRTRRH---PSHAGQATSVC*NSVQVATMVAL 108
S +AFH++ + + L D +P F RT R P AGQ ++ A ++A+
Sbjct: 309 SQLAFHNAINRYV--YMLARDGVLPAFLGRTHRRFQSPHRAGQLQTIL-----AAVVIAV 361
Query: 107 CRRLGCDPVQEL 72
C L DP Q+L
Sbjct: 362 CALLNADPYQQL 373
>UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1173
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 18 GRLTFRLTQVLTGHGCFGEFLHRITAEPTAEC 113
G + F L+QVL+GHG F + L R+ P+ +C
Sbjct: 934 GEVNFHLSQVLSGHGFFRDDLCRMGFTPSPDC 965
>UniRef50_UPI0000EBC405 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 239
Score = 33.1 bits (72), Expect = 1.3
Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 77 PAPDHSRADGRVPPWLR--LGHCFSIRSSPAPHGRGGAVSSSQK*EPTCR 220
PAP GR PP L LG S P GRG ++SSQK P CR
Sbjct: 75 PAPRSGPPTGRAPPSLPDPLGPNASAAGPPCSGGRGAGLTSSQKFAP-CR 123
>UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1022
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 18 GRLTFRLTQVLTGHGCFGEFLHRITAEPTAEC 113
G + F ++Q L+GHG F LHR+ P+ C
Sbjct: 888 GNIEFHMSQFLSGHGFFRSHLHRMGYVPSPVC 919
>UniRef50_Q4QGQ1 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 343
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 88 IRCRNSPKQPCPVSTCVSRKVRRPLCA 8
+RCR + + PVS+CV R V R LCA
Sbjct: 110 LRCRAATQNTSPVSSCVVRLVTRDLCA 136
>UniRef50_Q4DN30 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 1089
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 77 PAPDHSRADGRVPPWLRLGHCF-SIRSSPAPHGRGGAVS 190
P SR D PP L L H F I SSP+P R G S
Sbjct: 939 PTMQPSRGDAAAPPPLSLSHSFVPILSSPSPASRAGQAS 977
>UniRef50_UPI0000E805BC Cluster: PREDICTED: similar to scavenger
receptor cysteine-rich type 1 protein CD163c-alpha; n=7;
Gallus gallus|Rep: PREDICTED: similar to scavenger
receptor cysteine-rich type 1 protein CD163c-alpha -
Gallus gallus
Length = 760
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 170 HAGQATSVC*NSVQVATMVALCRRLGCDPVQELTE 66
H G VC N AT A+CR+LGC LT+
Sbjct: 504 HEGTWGRVCANGTSPATASAVCRQLGCGTAGSLTD 538
>UniRef50_UPI0000E805B9 Cluster: PREDICTED: similar to scavenger
receptor cysteine-rich type 1 protein CD163c-alpha; n=3;
Gallus gallus|Rep: PREDICTED: similar to scavenger
receptor cysteine-rich type 1 protein CD163c-alpha -
Gallus gallus
Length = 946
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 170 HAGQATSVC*NSVQVATMVALCRRLGCDPVQELTE 66
H G VC N AT A+CR+LGC LT+
Sbjct: 689 HEGTWGRVCANGTSPATATAVCRQLGCGTPGSLTD 723
>UniRef50_A1UDQ5 Cluster: Twin-arginine translocation pathway
signal; n=12; Mycobacterium|Rep: Twin-arginine
translocation pathway signal - Mycobacterium sp. (strain
KMS)
Length = 305
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 113 PPWLRLGHCF--SIRSSPAPHGRGGAVSSSQK 202
PPW C+ ++ SPAP GRGG S S++
Sbjct: 20 PPWALSARCYDRAVHDSPAPAGRGGLRSLSRR 51
>UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1;
Drosophila melanogaster|Rep: Endonuclease/reverse
transcriptase - Drosophila melanogaster (Fruit fly)
Length = 989
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 30 FRLTQVLTGHGCFGEFLHRITAEPTAECHHGCD 128
+ +TQ LT HGCF +L R TA+C + D
Sbjct: 886 YHMTQFLTDHGCFRGYLCRFRHVDTAQCLYCTD 918
>UniRef50_A1YZN4 Cluster: Tegument/envelope protein; n=1; Duck
enteritis virus|Rep: Tegument/envelope protein - Duck
enteritis virus
Length = 224
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 45 VLTGHGCF--GEFLHRITAEPTAECHHG-CDLDTVLAYARRL 161
++ G CF G F TA T+ CHHG +DTV YA RL
Sbjct: 83 LIVGLVCFFVGVFAIPTTAWDTSTCHHGWIGIDTVCVYAVRL 124
>UniRef50_Q24YF3 Cluster: Putative uncharacterized protein; n=3;
Clostridiales|Rep: Putative uncharacterized protein -
Desulfitobacterium hafniense (strain Y51)
Length = 233
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = -1
Query: 275 SIAFHDSSSPSIDATTLGNDKSVPIFATRTRRHPSHAGQATSVC*NSVQV 126
S A D+ SP++ LG +K + +FATR+ P+ G +SV +S++V
Sbjct: 63 SAALRDTWSPTVRPPRLGGNKRMGVFATRSPFRPNPLG-LSSVRLDSIEV 111
>UniRef50_Q092K6 Cluster: Glutamate--cysteine ligase; n=2;
Cystobacterineae|Rep: Glutamate--cysteine ligase -
Stigmatella aurantiaca DW4/3-1
Length = 446
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 294 GALAEVEHRLPRLVVAEHRCHNTWQRQVG 208
GA+ E E LP+L +AEHR + RQ G
Sbjct: 346 GAMEEAERLLPKLTLAEHRAFHETARQQG 374
>UniRef50_A0LL02 Cluster: Putative uncharacterized protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Putative
uncharacterized protein - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 966
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -3
Query: 294 GALAEVEHRLPRLVVAEHRCHNTWQRQVGSYFCDEDTAP 178
GAL +V +LP V+A R H TW G D D AP
Sbjct: 83 GALGKVRGKLP--VIARDRAHFTWPTGPGMLMLDFDPAP 119
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 31.9 bits (69), Expect = 2.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 36 LTQVLTGHGCFGEFLHRITAEPTAEC 113
LTQ++TGHG F E+L R + + C
Sbjct: 1589 LTQIMTGHGGFSEYLCRFKCKESPSC 1614
>UniRef50_A7HCT3 Cluster: Cell surface receptor IPT/TIG domain
protein; n=1; Anaeromyxobacter sp. Fw109-5|Rep: Cell
surface receptor IPT/TIG domain protein -
Anaeromyxobacter sp. Fw109-5
Length = 12684
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 35 AHAGAHWAWLFR*VPAPDHSRADGRVPPWLRL 130
A AHW W A +S GR P WLR+
Sbjct: 8239 AQGNAHWGWRPSAGAAKQYSNVSGRPPRWLRI 8270
>UniRef50_A6PRJ4 Cluster: Alpha-L-arabinofuranosidase-like protein
precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Alpha-L-arabinofuranosidase-like protein precursor -
Victivallis vadensis ATCC BAA-548
Length = 688
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 116 VALCRRLGCDPVQELTETTMPSEHLREPESE 24
+ LCR LG +P+ +T+ +P+E L E +E
Sbjct: 131 IRLCRALGAEPIITMTDYALPAEELPEHMAE 161
>UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1201
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 18 GRLTFRLTQVLTGHGCFGEFLHRITAEPTAEC 113
G +TF L+QVL+GHG F E L + + +C
Sbjct: 985 GDVTFHLSQVLSGHGFFREHLCGMQLTSSPDC 1016
>UniRef50_UPI000155512F Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 159
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 34 GSRRCSLGMVVSVSSCTGSQPSRRQSATM---VATWTLF*HTLVACPAWEGWRRVL 192
G RC GM + GS+PSR + + +A WTL H + A W W R L
Sbjct: 30 GPHRCG-GMDNQDTGTRGSRPSRSRVGGVQGVLALWTLTTHVMYAQDYWRTWLRGL 84
>UniRef50_Q8DJH0 Cluster: Tsr1255 protein; n=1; Synechococcus
elongatus|Rep: Tsr1255 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 96
Score = 31.1 bits (67), Expect = 5.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 172 PMRGRRRAYAKTVSKSQPWWHSAVGSAVI 86
P RG+R A A+ + PWW S+ AV+
Sbjct: 35 PGRGKRIAKAQGIDLGTPWWQSSPADAVV 63
>UniRef50_A3MCE4 Cluster: Putative uncharacterized protein; n=1;
Burkholderia mallei NCTC 10247|Rep: Putative
uncharacterized protein - Burkholderia mallei (strain
NCTC 10247)
Length = 54
Score = 31.1 bits (67), Expect = 5.1
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = -2
Query: 199 LRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQPCPVSTCVSRKVR 23
+R G A PPM G RR A +S W VG+ +RCR ++PC + V+ K R
Sbjct: 1 MRFGVDAPPPM-GSRRGIASFRGESARW---DVGA--LRCRTRLREPCDANGDVTGKSR 53
>UniRef50_A1B0V9 Cluster: Alpha/beta hydrolase fold precursor; n=1;
Paracoccus denitrificans PD1222|Rep: Alpha/beta
hydrolase fold precursor - Paracoccus denitrificans
(strain Pd 1222)
Length = 265
Score = 31.1 bits (67), Expect = 5.1
Identities = 25/85 (29%), Positives = 32/85 (37%)
Frame = -3
Query: 297 DGALAEVEHRLPRLVVAEHRCHNTWQRQVGSYFCDEDTAPPLPCGAGDERMLKQCPSRNH 118
D L + E RL + V R + V TAP L G D+ ++ S
Sbjct: 168 DAELEQAEARLQPIAVQAARIRMLMEHDVFDRL-GRITAPTLVIGGSDDALIPFASSERL 226
Query: 117 GGTLPSARL*SGAGTHRNNHAQ*AP 43
+P ARL S G H A AP
Sbjct: 227 AAAIPGARLASLPGGHFFPRAYPAP 251
>UniRef50_Q9ZPI0 Cluster: F15P23.2 protein; n=7; Magnoliophyta|Rep:
F15P23.2 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 590
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -3
Query: 267 LPRLVVAEHRCHNTWQRQVGSYFCDEDTAPPLPCGAGD--ERMLKQCPSRNHGGTLPSA 97
+P +A+ + H W ++ G YF P GAG E++ + P +GGTL +A
Sbjct: 160 MPYNKIADRKGHQGWMKREGEYFTFPGGGTMFPGGAGQYIEKLAQYIPL--NGGTLRTA 216
>UniRef50_Q6Z074 Cluster: Putative uncharacterized protein
P0412D08.6; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0412D08.6 - Oryza sativa subsp. japonica (Rice)
Length = 256
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 143 SIRSSPAPHGRGGAVSSSQK*EPTCRCQVLWHRCSATTSRGRRCSTSASAPSR 301
+I A HGR G +++ EP RC+ W R R C A AP+R
Sbjct: 113 AIEEGSAAHGRSGKAAAAVA-EPAARCRAGWQVGEGRRRRCRACRCRA-APAR 163
>UniRef50_O44317 Cluster: Reverse transcriptase; n=1; Dugesiella
sp.|Rep: Reverse transcriptase - Dugesiella sp
Length = 488
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 36 LTQVLTGHGCFGEFLHR--ITAEPTAECHHGCDLDTVLAYARRLPRMGGVAPCPRRKN 203
+TQ+LT HG ++HR +T+ P C D + + R + GV+ R N
Sbjct: 430 ITQILTNHGRTPSYMHRFGLTSSPLCSCGGVGDWEHYFFFCRSTEAVAGVSADYRTYN 487
>UniRef50_Q0CBT5 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 462
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -2
Query: 208 FLFLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQPCPVSTCVSRK 29
F++L + G +RGR A++ S+P +H V A +R R+ + P P C R
Sbjct: 390 FMYLPKYDGGHQALRGRL-AFSLPSGHSRPLFHPQVTFAQMRPRSGNETPSPEEAC-QRS 447
Query: 28 VRRPL 14
R+ +
Sbjct: 448 TRQSI 452
>UniRef50_Q03272 Cluster: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 4
(Retrovirus-related Pol polyprotein from type I
retrotransposable element R1 4) [Includes: Reverse
transcriptase (EC 2.7.7.49); Endonuclease]; n=1; Nasonia
vitripennis|Rep: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 4
(Retrovirus-related Pol polyprotein from type I
retrotransposable element R1 4) [Includes: Reverse
transcriptase (EC 2.7.7.49); Endonuclease] - Nasonia
vitripennis (Parasitic wasp)
Length = 392
Score = 31.1 bits (67), Expect = 5.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 39 TQVLTGHGCFGEFLHRITAEPTAEC 113
+QVLTGHG + E LH+++ A C
Sbjct: 284 SQVLTGHGYYNEKLHQLSLAKAAAC 308
>UniRef50_UPI00015B47DE Cluster: PREDICTED: similar to has homology
with reverse transcriptase; 5 end of coding region for
ORF2 undetermined; putative; n=3; Nasonia
vitripennis|Rep: PREDICTED: similar to has homology with
reverse transcriptase; 5 end of coding region for ORF2
undetermined; putative - Nasonia vitripennis
Length = 883
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 145 HTLVACPAWEGWRRVLVAKIGTDLSLPSVVASMLGDDESWKAMLDF 282
HT P W RR L IGT + +VV MLG ++W + F
Sbjct: 323 HTFFDWPHWAEKRRALELTIGT-FTPETVVEVMLGSKQNWDEITTF 367
>UniRef50_UPI0000EBE980 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 892
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 77 PAPDHSRADGRVPPWLRLGHCFSIRSSPAPHGRGGAVSS 193
P PDH R G P +R G S R P+ RGG VS+
Sbjct: 458 PGPDHRRDGGSAPGPVRRGRSASTR---GPNPRGGRVSA 493
>UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=2; Tribolium castaneum|Rep: PREDICTED: similar
to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 1208
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 18 GRLTFRLTQVLTGHGCFGEFLHRITAEPTAECHHGCDLDT 137
G++ F LTQ L+GHG F +L ++ C + ++DT
Sbjct: 882 GQVNFYLTQFLSGHGDFRCYLKKMHRAENDRCVYCGEMDT 921
>UniRef50_Q4T6D8 Cluster: Chromosome undetermined SCAF8805, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF8805,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 589
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 215 CRCQVLWHRCSATTSRGRRCSTSASAPS 298
C +V W RCSA T R STSAS PS
Sbjct: 544 CPARVPWTRCSART-RKSSASTSASTPS 570
>UniRef50_A0LM48 Cluster: SMC domain protein; n=1; Syntrophobacter
fumaroxidans MPOB|Rep: SMC domain protein -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 1020
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -2
Query: 184 GATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQPCPVSTCVSRKVRRPLCAI 5
G +R R YA+ + ++ + ++G AV R SP+Q P + V+RP +
Sbjct: 58 GGERDVRHLRSDYARASTPTRVTFDFSLGEAVYRITRSPEQERPRARGEGTVVQRPAAVL 117
Query: 4 H 2
H
Sbjct: 118 H 118
>UniRef50_Q9GRH4 Cluster: CDC2L5 protein kinase; n=4; Eukaryota|Rep:
CDC2L5 protein kinase - Sphaerechinus granularis (Purple
sea urchin)
Length = 1266
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 175 PPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQ 62
PP RGR+RA + ++ +HS++G V++ R Q
Sbjct: 255 PPYRGRKRARSPSLDIPATKYHSSIGGEVLKYRKKNVQ 292
>UniRef50_UPI0000D9DC2C Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 70
Score = 30.3 bits (65), Expect = 8.8
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -2
Query: 196 RRGHGATPPMRGRRRAYAKTVSKSQPWWHSA-VGSAVIRCRNSPK--QPCPVSTCVSRKV 26
R G PP GRRRA A V + + +GSA C SPK QPC S S++
Sbjct: 6 RLGMVCAPPRPGRRRAGAPGVPEGRRGGRGGLMGSA--WCFRSPKCEQPCAGSARGSKES 63
Query: 25 RRPL 14
RP+
Sbjct: 64 VRPI 67
>UniRef50_UPI0000D9BA5E Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 225
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 196 RRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQPCPVS 47
R+G G R + + A+ QPWW +A G A + +P +P P S
Sbjct: 82 RKGRGEPGGFRNKGQESARGPKGCQPWW-AAEGDASGEEQRAPLRPAPQS 130
>UniRef50_UPI000023DE5A Cluster: predicted protein; n=1; Gibberella
zeae PH-1|Rep: predicted protein - Gibberella zeae PH-1
Length = 341
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 189 DTAPPLPCGAGDERMLKQCPSRNHGGTLPSAR 94
D+ PP C AGDER + P H T P +R
Sbjct: 287 DSHPPNGCEAGDERASVRLPMNAHYTTQPKSR 318
>UniRef50_Q9I9F1 Cluster: 5-methylcytosine G/T mismatch-specific DNA
glycosylase; n=3; Gallus gallus|Rep: 5-methylcytosine
G/T mismatch-specific DNA glycosylase - Gallus gallus
(Chicken)
Length = 416
Score = 30.3 bits (65), Expect = 8.8
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +2
Query: 170 GRGGAVSSSQK*EPTCRCQVLWHRCSATTSRGRRCSTSASAPSR 301
G GGA SS Q+ RC+ R SA + RC+T A A R
Sbjct: 46 GEGGARSSQQRHGTAVRCE----RPSARGGKAERCATKAEAGGR 85
>UniRef50_A7J655 Cluster: Putative uncharacterized protein n001L;
n=2; Chlorella virus FR483|Rep: Putative uncharacterized
protein n001L - Chlorella virus FR483
Length = 170
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 142 KTVSKSQPWWHSAVGSAVIRCRNSPKQPCPVSTCVSRKVRRPLC 11
K + K PW+ S+ S RC P+ P R +RRP C
Sbjct: 86 KHIPKHLPWFRSSSSSPSTRCCTMPRSRRPRCLRRPRCLRRPRC 129
>UniRef50_Q1YMP4 Cluster: Putative uncharacterized protein; n=1;
Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
protein - Aurantimonas sp. SI85-9A1
Length = 387
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 210 GSYFCDEDTAPPLPCGAGDERMLKQCPSRNHGGTLPSARL*SGAGT 73
GS F D++ A L G + +++Q S N GG P A+ + AG+
Sbjct: 41 GSAFADDNDAFTLQSGTDNTALIQQSGSGNQGGLAPVAQNATQAGS 86
>UniRef50_A6TAQ2 Cluster: Putative uncharacterized protein; n=1;
Klebsiella pneumoniae subsp. pneumoniae MGH 78578|Rep:
Putative uncharacterized protein - Klebsiella pneumoniae
subsp. pneumoniae MGH 78578
Length = 471
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 114 HHGCDLDTVLAYARRLPRMGGVA 182
HHG DL TV Y R+GGVA
Sbjct: 55 HHGADLQTVAWYTLARARLGGVA 77
>UniRef50_Q4DUC5 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 1612
Score = 30.3 bits (65), Expect = 8.8
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -2
Query: 172 PMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPK 65
P ++ + S + PWW + ++V+ CR++P+
Sbjct: 178 PSAAITESFIRCFSPTSPWWRALAVASVLTCRDAPE 213
>UniRef50_Q1DKF2 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 97
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 144 AYARRLPRMGGVAPCPRRKNRNRLVVAKCCGIDARRRRVVEGDARLL 284
A ARRL +MG P P+ K +V + G+DARR D R L
Sbjct: 46 AEARRLTKMGRECPVPKPKG----IVGQILGLDARRESGGGADFRKL 88
>UniRef50_A6QVW4 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 455
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 238 MPQHLATTSRFLFLRRGHGATPPMRGRRRAYAKTVSKSQPWW 113
M HL T+ L + H ATPPM G + ++K +P++
Sbjct: 131 MLDHLQTSLPPHLLNQFHDATPPMGGGESPLSPAINKGEPYF 172
>UniRef50_P25316 Cluster: Uncharacterized 12.3 kDa protein in
nifK-nifY intergenic region; n=1; Azospirillum
brasilense|Rep: Uncharacterized 12.3 kDa protein in
nifK-nifY intergenic region - Azospirillum brasilense
Length = 118
Score = 30.3 bits (65), Expect = 8.8
Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Frame = +2
Query: 74 VPAPDHSRADGRVPPWLRLGHCFSIRSS--PAPHGRGGAVSSSQK*EPT------CRCQV 229
+PAP R+ W R G + S A G G +SS P+ C CQ
Sbjct: 37 LPAPSSPRS---FRSWRRRGSSRPAKGSRVTACQGAGRPSASSSSSTPSRARSRCCECQE 93
Query: 230 LWHRCSATTSRGRRCSTSASAPS 298
+ RC+ R +TSASAPS
Sbjct: 94 IRGRCAVFDDRPPDWATSASAPS 116
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,917,377
Number of Sequences: 1657284
Number of extensions: 7897157
Number of successful extensions: 29309
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 27974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29303
length of database: 575,637,011
effective HSP length: 77
effective length of database: 448,026,143
effective search space used: 10304601289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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