Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6284
(302 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 0.61
SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|c... 26 1.4
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 1.8
SPCC1183.10 |wtf10||wtf element Wtf10|Schizosaccharomyces pombe|... 25 1.8
SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces ... 25 2.4
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 25 3.2
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 24 4.3
SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr 1|||... 24 4.3
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 24 4.3
SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein Mc... 24 5.6
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 23 7.5
SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredox... 23 7.5
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 23 7.5
SPCC663.15c |||conserved fungal protein|Schizosaccharomyces pomb... 23 7.5
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 23 9.9
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.1 bits (57), Expect = 0.61
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 287 SQKSSIAFHDSSSPSIDATTLGNDKSVPIFATRTRRHPSHAGQATS 150
S SS + SSS S +++ + SVPI ++ + H S + ++S
Sbjct: 182 SSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSS 227
>SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 708
Score = 25.8 bits (54), Expect = 1.4
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -1
Query: 290 HSQKSSIAFHDSSSPSIDATTLGNDKSVPIFATRTRRHPSHAGQAT 153
HS+ SS+ +S PS+ + + +D ++PI PSH+ +++
Sbjct: 57 HSRSSSL---ESKKPSVASQDVKSDGTLPIGTNNNPLIPSHSQESS 99
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.4 bits (53), Expect = 1.8
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -1
Query: 287 SQKSSIAFHDSSSPSIDATTLGNDKSVPIFATRTRRHPSHAG--QATSVC*NSVQVATMV 114
+ K+S++ +++PSI P+ +R P HAG + TSV N + V
Sbjct: 573 NDKASVSITTTTTPSITPADPVPTSPKPLAIEPVKRKPVHAGNLEVTSVSDNKLGATVQV 632
>SPCC1183.10 |wtf10||wtf element Wtf10|Schizosaccharomyces pombe|chr
3|||Manual
Length = 258
Score = 25.4 bits (53), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 116 VALCRRLGCDPVQELTETTMPSEHLREPESEA 21
V L R++G + Q++ E T H PESEA
Sbjct: 227 VNLIRKMGHEAKQQVNEYTAIPLHEMNPESEA 258
>SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 598
Score = 25.0 bits (52), Expect = 2.4
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Frame = +1
Query: 22 ASLSGSRRCSLGMVVSVSSCTGSQPSRRQSATMVATWTLF*HTLVACPAWEGWRRVLV-- 195
+ GS C++ S + T + + S + WTL P WE + +
Sbjct: 48 SGFDGSAGCAVIGETSAALFTDGRYFNQASQQLDENWTLMKQGFTGVPTWEEYCTQMTKC 107
Query: 196 -AKIGTDLSL 222
K+G D SL
Sbjct: 108 NEKVGIDSSL 117
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 24.6 bits (51), Expect = 3.2
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -2
Query: 208 FLFLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNS-PKQPCPV 50
F L+R + T M KT +SQP+W S +I C N QP V
Sbjct: 397 FATLKRNYSPTQYMLCCNTTMMKT--RSQPFWIIVSESCIILCDNMLSMQPADV 448
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 24.2 bits (50), Expect = 4.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 275 SIAFHDSSSPSIDATTL 225
+I FHD SSP ++ TL
Sbjct: 151 AIGFHDMSSPIVETMTL 167
>SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 24.2 bits (50), Expect = 4.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 263 HDSSSPSIDATTLGNDKSVPIFATRTRRHPS 171
H+ +S D+ +L +S P FA HP+
Sbjct: 336 HNDTSTEYDSNSLRRSRSNPAFANDDTVHPN 366
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 24.2 bits (50), Expect = 4.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 299 EMVHSQKSSIAFHDSSSPSIDATTLGNDKS 210
EM+ + +SSI H+SS+ +ID D+S
Sbjct: 615 EMLATSRSSILSHNSSAGNIDDKMKSIDES 644
>SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein
Mcp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 23.8 bits (49), Expect = 5.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 131 QVATMVALCRRLGCDPVQELTETTMPSE 48
Q+ T++A CR +G D Q ++P +
Sbjct: 174 QIHTLIAFCRDMGADTNQIREYCSIPED 201
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 23.4 bits (48), Expect = 7.5
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 186 CPRRKNRN-RLVVAKCCGIDARRRRVVE 266
C +R N R ++ K C +D RR+ VV+
Sbjct: 181 CIQRYNELVRDLIGKACDLDPRRKNVVK 208
>SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredoxin
Etp1/ cytochrome oxidase cofactor Cox15,
fusion|Schizosaccharomyces pombe|chr 1|||Manual
Length = 631
Score = 23.4 bits (48), Expect = 7.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 169 WEGWRRVLVAKIGTDLSLPSV 231
WE + RVL IG + LPS+
Sbjct: 177 WEWFHRVLGRGIGLTILLPSI 197
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 23.4 bits (48), Expect = 7.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 119 WLRLGHCFSIRSSPAPHGRGGAVSSSQK*EP 211
WL GH F+ R P R + SS EP
Sbjct: 378 WLSFGHRFAERCCHLPGKRIFTIDSSYSEEP 408
>SPCC663.15c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 657
Score = 23.4 bits (48), Expect = 7.5
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 63 CFGEFLHRITAEPTAECHHGCD 128
CF F+HR+ C CD
Sbjct: 501 CFVRFIHRLVVNAPDLCGEWCD 522
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 23.0 bits (47), Expect = 9.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 169 MRGRRRAYAKTVSKSQPWWHSAVGS 95
MR RR+ + +S+ + HS VGS
Sbjct: 382 MRERRQVFRTLLSQDPVYAHSVVGS 406
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,382,264
Number of Sequences: 5004
Number of extensions: 26727
Number of successful extensions: 84
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 75747362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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