Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6284
(302 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0388 + 43236629-43237612 31 0.13
06_02_0263 - 13566621-13569875 30 0.40
05_01_0198 + 1429396-1430640 29 0.70
04_04_0843 - 28619064-28619280,28619730-28619825,28620349-286207... 29 0.92
07_03_0669 - 20542481-20542489,20543212-20543872,20543899-205439... 28 1.2
12_02_0923 - 24392892-24394148 28 1.6
06_03_1189 + 28271185-28271394,28272421-28273326 28 1.6
06_03_0002 - 15280292-15281550,15282714-15282840 28 1.6
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 28 1.6
04_03_0244 + 13296645-13296746,13297354-13297527 28 1.6
11_06_0062 + 19709801-19710832,19712383-19712568,19712661-197128... 27 2.1
11_06_0061 - 19702893-19703869,19703960-19704098,19704166-197042... 27 2.1
10_05_0038 - 8458901-8459207,8459367-8459705,8459710-8459913,846... 27 2.1
02_04_0594 - 24182946-24183641,24184122-24184476,24184553-241847... 27 2.1
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 27 2.8
10_07_0138 + 13325418-13325954 27 3.7
08_02_1593 + 28105567-28105830,28106075-28106164,28106435-28106524 27 3.7
04_02_0009 + 8476600-8477125,8478711-8478730 27 3.7
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 27 3.7
09_04_0281 - 16360082-16361059,16361608-16361688,16363287-163636... 26 4.9
08_02_0249 - 14770259-14770344,14770434-14770514,14770606-147710... 26 4.9
05_06_0086 - 25447063-25447182,25448082-25448702 26 4.9
05_05_0206 - 23264508-23265155 26 4.9
02_05_1019 - 33549576-33550247,33550885-33551121,33551206-335513... 26 4.9
11_06_0444 + 23633129-23633183,23633409-23633446,23633967-236340... 26 6.5
03_06_0754 - 36025579-36027000 26 6.5
10_08_0206 + 15809261-15809390,15810655-15810763,15811237-158112... 25 8.6
07_01_0483 + 3633010-3633203,3633652-3633957,3634598-3634821,363... 25 8.6
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 25 8.6
03_03_0060 - 14157352-14158851 25 8.6
02_04_0537 - 23734010-23734715,23735326-23735333 25 8.6
>01_07_0388 + 43236629-43237612
Length = 327
Score = 31.5 bits (68), Expect = 0.13
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +1
Query: 22 ASLSGSRRCSLGMVVSVSSCTGSQPSRRQSATMVATWTLF*HTLVACPAWEGWRRVLVAK 201
A+ + C G++ S CT + P Q+ + H L A R V+ +
Sbjct: 67 AAAAAGGGCRAGVLHVASPCTLADPRDPQAELVEPAVRGTLHVLEAARGAGARRVVVTSS 126
Query: 202 IGTDLSLPSVVASMLGDDESWKAMLDFCE 288
I + P + A L D+ SW M +FC+
Sbjct: 127 ISAMVPNPGLAAGELVDERSWTDM-EFCK 154
>06_02_0263 - 13566621-13569875
Length = 1084
Score = 29.9 bits (64), Expect = 0.40
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +3
Query: 117 HGCDLDTVLAYA-----RRLPRMGGVAPCPRRKN-RNRLVVAKCCGIDARRRRVVEGDAR 278
HG DL LA +P AP P +N +R A+ CG D RV +GD
Sbjct: 69 HGADLPDYLARTLHTVIHAIPTHADDAPAPAPQNPASRGTGARVCGKDKAEERVRDGDPG 128
Query: 279 LLRV 290
L +V
Sbjct: 129 LYQV 132
>05_01_0198 + 1429396-1430640
Length = 414
Score = 29.1 bits (62), Expect = 0.70
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 86 DHSRADGRVPPWLRLGHCFSIRSSPAPHGRGGAVSS 193
DH + + PPW + HC + P GG V S
Sbjct: 192 DHRKPEPTSPPWEKYWHCDPLPPPPFVFDSGGMVES 227
>04_04_0843 -
28619064-28619280,28619730-28619825,28620349-28620720,
28620849-28621161,28621183-28621393,28621478-28621681,
28622328-28622726
Length = 603
Score = 28.7 bits (61), Expect = 0.92
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 291 ALAEVEH-RLPRLVVAEHRCHNTWQRQVGSYFCDEDTAPPLPCGA 160
+L ++ H +P +AE + H W +Q GSYF P GA
Sbjct: 130 SLHKIWHDNMPYGKIAERKGHQGWMKQEGSYFIFPGGGTMFPDGA 174
>07_03_0669 -
20542481-20542489,20543212-20543872,20543899-20543983,
20545311-20546625
Length = 689
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -1
Query: 107 CRRLGCDPVQELTETTMPSEHLREPESE 24
CRRLG PVQ +T P L E E E
Sbjct: 531 CRRLGVPPVQYKVDTLWPFVTLVESEGE 558
>12_02_0923 - 24392892-24394148
Length = 418
Score = 27.9 bits (59), Expect = 1.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 75 FLHRITAEPTAECHHGC 125
F+HRI PT ECH C
Sbjct: 358 FMHRIYDNPTKECHGPC 374
>06_03_1189 + 28271185-28271394,28272421-28273326
Length = 371
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 223 ATTSRFLFLRRGHGATPPMRGRRRAYAKTVSKSQP 119
AT L G GA PP + RRRA A + P
Sbjct: 300 ATAGEVLSEEEGDGAPPPAKKRRRAVAGVAGEECP 334
>06_03_0002 - 15280292-15281550,15282714-15282840
Length = 461
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 77 PAPDHSRADGRVPPWLRLGHCFSIRSSPAPHG 172
PAP HS+ P L L HC +R PAP G
Sbjct: 120 PAPPHSQ------PNLNLCHCCGVRFPPAPPG 145
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 198 KNRNRLVVAKCCGIDARRRRVVEG 269
KN N V CCG+ A+RR + G
Sbjct: 577 KNHNTQVARACCGLRAKRRWCLSG 600
>04_03_0244 + 13296645-13296746,13297354-13297527
Length = 91
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 196 RRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCR 77
RRG AT + +A+ + S+ WH GS +RCR
Sbjct: 41 RRGGNATEIAAMQWQAFDQQFSRDPRRWHGMHGSVHMRCR 80
>11_06_0062 +
19709801-19710832,19712383-19712568,19712661-19712867,
19712940-19713078,19713172-19713380,19713520-19714134
Length = 795
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 184 GATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQPCP 53
G +PP+ GRRR + K + W GS SP PCP
Sbjct: 4 GGSPPLTGRRR--RRRGEKVRRWTRPKKGSV----SRSPHYPCP 41
>11_06_0061 -
19702893-19703869,19703960-19704098,19704166-19704287,
19704362-19704416,19704508-19704624,19704718-19705413,
19706358-19706393,19707190-19708236
Length = 1062
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 184 GATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQPCP 53
G +PP+ GRRR + + W GS +C +SP+ P P
Sbjct: 4 GRSPPLTGRRRGRGRV----RRWTRPPKGS---QCSSSPRSPRP 40
>10_05_0038 -
8458901-8459207,8459367-8459705,8459710-8459913,
8460374-8460492
Length = 322
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 203 IFATRTRRHPSHAGQATSVC*NSVQVATMVALCRRL 96
++ +TRR A +T+ C S+ ATMV + RRL
Sbjct: 134 VYQEKTRRRRRGAKLSTATCEVSLPCATMVRMPRRL 169
>02_04_0594 -
24182946-24183641,24184122-24184476,24184553-24184743,
24184840-24185046
Length = 482
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/57 (19%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -2
Query: 238 MPQHLATTSRFLFLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGS--AVIRCRN 74
+P + +++ G P+RG Y + V++ P+W+ + G+ ++ C +
Sbjct: 194 LPISVCNLVHYVYRLNATGDLAPLRGLVADYVRVVAERYPYWNRSRGADHVIVSCHD 250
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +3
Query: 111 CHHGCDLDTVLAYARRLPRMGGV---APCPRRKNRNRLVVA-KCCGIDARRRRVVEGD 272
CH G ++T + R GG+ PC + R + CG A RRR EGD
Sbjct: 378 CHRGSCVETCRLVITKSCRCGGLKKEVPCYQELTCERKCQRLRNCGRHACRRRCCEGD 435
>10_07_0138 + 13325418-13325954
Length = 178
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 150 ARRLPRMGGVAPCPRRKNRNRLVVAKC 230
ARRLP + G C RR R+R ++C
Sbjct: 75 ARRLPDLRGARRCSRRWRRSRRWRSRC 101
>08_02_1593 + 28105567-28105830,28106075-28106164,28106435-28106524
Length = 147
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2
Query: 196 RRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAV 89
RRG GATPP RRR Y + WW SAV + +
Sbjct: 30 RRGEGATPP---RRRPYG-----LRRWW-SAVAATI 56
>04_02_0009 + 8476600-8477125,8478711-8478730
Length = 181
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 131 GHCFSIRSSPAPHGRGGAVSSSQK*EPTCRC 223
G F R SPA RG + Q+ PT RC
Sbjct: 121 GDAFERRRSPAAVARGRRLRRQQRRRPTRRC 151
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 230 LWHRCSATTSRGRRCSTSASAP 295
L HRCS TT C T A AP
Sbjct: 330 LTHRCSTTTQPLPTCGTPAPAP 351
>09_04_0281 -
16360082-16361059,16361608-16361688,16363287-16363650,
16363675-16364348
Length = 698
Score = 26.2 bits (55), Expect = 4.9
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = -3
Query: 276 EHRLPRLVVAEHRCHNTWQRQVGSYFCDEDTAPPLPCGAGDERMLKQCPSRNHG 115
+H+ P + +H + RQ F + T P G L+QCPS+ G
Sbjct: 377 QHKQP---LRQHGLRHRGHRQPSVQFLQDQTHPQEHSGHDGFGRLQQCPSQQEG 427
>08_02_0249 -
14770259-14770344,14770434-14770514,14770606-14771006,
14771358-14771392,14771913-14771950,14772176-14772230
Length = 231
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 252 VAEHRCHNTWQRQVGSYFCDEDT 184
VAEH CH ++ S FCD T
Sbjct: 92 VAEHVCHPEKMERLVSSFCDAQT 114
>05_06_0086 - 25447063-25447182,25448082-25448702
Length = 246
Score = 26.2 bits (55), Expect = 4.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 22 ASLSGSRRCSLGMVVSVSSCTGSQPSR-RQSATMVATWTL 138
A +GS SLG +V C + P+R R+ T A W L
Sbjct: 28 APKAGSGHPSLGSGAAVGGCGSAGPARARRRRTTAARWRL 67
>05_05_0206 - 23264508-23265155
Length = 215
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 113 PPWLRLGHCFSIRSSPAPHGRGG 181
PP L ++ SSP PHGR G
Sbjct: 74 PPSYHLRAAAAMSSSPQPHGRSG 96
>02_05_1019 -
33549576-33550247,33550885-33551121,33551206-33551317,
33551998-33552215,33553084-33553194
Length = 449
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 148 TLVACPAWEGWRRVLVAKIGTDLSLPSVVASMLGDDES 261
T +C WRR K+ DLS+ SM DD +
Sbjct: 366 TWASCFIQAAWRRYKRRKMARDLSMRESFCSMRSDDSN 403
>11_06_0444 +
23633129-23633183,23633409-23633446,23633967-23634001,
23634353-23634753,23634845-23634925,23635015-23635100
Length = 231
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 252 VAEHRCHNTWQRQVGSYFCDEDT 184
VAEH CH ++ S FCD T
Sbjct: 92 VAEHVCHPEKMERLVSSFCDVQT 114
>03_06_0754 - 36025579-36027000
Length = 473
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 6 IAHRGRLTFRLTQVLTGHGCFGEFLHRITAEPTAECHH 119
+A RG++ + ++L G F IT T CHH
Sbjct: 432 MAERGKVEAAVAELLVGLNYLCRFHKEITTCRTRTCHH 469
>10_08_0206 +
15809261-15809390,15810655-15810763,15811237-15811265,
15811721-15813048
Length = 531
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = -2
Query: 115 WHSAVGSAVIRCRNSPKQPCPVSTCV 38
W SA+ + + C P QP P +
Sbjct: 22 WRSAMDALICNCLRPPPQPSPADLAI 47
>07_01_0483 +
3633010-3633203,3633652-3633957,3634598-3634821,
3635722-3635825,3636528-3636662,3637537-3637705,
3638074-3638209,3639200-3639338,3640487-3640663,
3640874-3641041,3641363-3641458,3642217-3642345,
3642439-3642669
Length = 735
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 48 LTGHGCFGEFLHRITAEPTAEC 113
LTG+GC FL + TA EC
Sbjct: 47 LTGYGCEDHFLEQDTAAHAWEC 68
>03_05_1065 +
30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 221 NDKSVPIFATRTRRHPSHAGQATS 150
+D + +FAT +R HP H AT+
Sbjct: 146 SDPATCVFATTSRDHPIHLWDATT 169
>03_03_0060 - 14157352-14158851
Length = 499
Score = 25.4 bits (53), Expect = 8.6
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = -2
Query: 232 QHLATTSRFLFLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRC 80
Q +TT+ + +G PP R R A K V K H A RC
Sbjct: 14 QRKSTTTTTSVVGPDNGGLPPRRSSRIAERKNVVKRARHRHDGEQPATSRC 64
>02_04_0537 - 23734010-23734715,23735326-23735333
Length = 237
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -2
Query: 133 SKSQPWWHSAVGSAVIRCRNSP-KQPCPVSTCVSRKV-RRP 17
+K QPW+ A+G + R + P P + V+ V RRP
Sbjct: 9 AKKQPWYRRALGGLIPSARRAAIAAPPPPAAAVAGAVERRP 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,030,466
Number of Sequences: 37544
Number of extensions: 276980
Number of successful extensions: 1040
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 351703996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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