BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6284
(302 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK026247-1|BAB15410.1| 144|Homo sapiens protein ( Homo sapiens ... 29 2.7
EF036485-1|ABO65071.1| 91|Homo sapiens SRp25 nuclear protein i... 29 3.5
DQ099385-1|AAZ13761.1| 181|Homo sapiens ADP-ribosylation-like f... 29 3.5
BC094839-1|AAH94839.1| 352|Homo sapiens ADP-ribosylation-like f... 29 3.5
BC069262-1|AAH69262.1| 900|Homo sapiens INT1 protein protein. 29 3.5
BC037539-1|AAH37539.1| 956|Homo sapiens angiomotin like 1 protein. 29 3.5
BC018777-1|AAH18777.1| 698|Homo sapiens INT1 protein protein. 29 3.5
BC014126-1|AAH14126.1| 498|Homo sapiens Similar to RIKEN cDNA 4... 29 3.5
BC013367-1|AAH13367.2| 809|Homo sapiens INT1 protein protein. 29 3.5
AY358482-1|AAQ88846.1| 1029|Homo sapiens HILV1821 protein. 29 3.5
AK093699-1|BAC04218.1| 543|Homo sapiens protein ( Homo sapiens ... 29 3.5
AB037861-1|BAA92678.1| 1377|Homo sapiens KIAA1440 protein protein. 29 3.5
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein. 28 4.7
BC112278-1|AAI12279.1| 702|Homo sapiens nucleolar protein 9 pro... 28 4.7
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592... 28 4.7
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592... 28 4.7
BC110849-1|AAI10850.1| 702|Homo sapiens nucleolar protein 9 pro... 28 4.7
BC105095-1|AAI05096.1| 702|Homo sapiens nucleolar protein 9 pro... 28 4.7
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592... 28 4.7
BC053845-1|AAH53845.1| 598|Homo sapiens HKR1 protein protein. 28 4.7
BC017256-1|AAH17256.1| 659|Homo sapiens GLI-Kruppel family memb... 28 4.7
BC004513-1|AAH04513.2| 422|Homo sapiens HKR1 protein protein. 28 4.7
AK223616-1|BAD97336.1| 730|Homo sapiens Krueppel-related zinc f... 28 4.7
AK056076-1|BAB71089.1| 685|Homo sapiens protein ( Homo sapiens ... 28 4.7
AB013897-1|BAA86058.1| 697|Homo sapiens HKR1 protein. 28 4.7
M60298-1|AAA74589.1| 721|Homo sapiens erythrocyte membrane prot... 28 6.2
M30647-1|AAA36401.1| 721|Homo sapiens protein ( Human erythrocy... 28 6.2
M30646-1|AAA36402.1| 691|Homo sapiens protein ( Human erythrocy... 28 6.2
M29399-1|AAA35798.1| 691|Homo sapiens protein ( Human erythrocy... 28 6.2
L06519-1|AAA52385.1| 721|Homo sapiens protein ( Human erythrocy... 28 6.2
BC099627-1|AAH99627.1| 619|Homo sapiens EPB42 protein protein. 28 6.2
BC096094-1|AAH96094.1| 691|Homo sapiens EPB42 protein protein. 28 6.2
BC096093-1|AAH96093.1| 691|Homo sapiens EPB42 protein protein. 28 6.2
AL356095-14|CAI40450.1| 87|Homo sapiens placenta-specific 9 pr... 28 6.2
AB064151-1|BAC01779.1| 273|Homo sapiens immunoglobulin lambda l... 28 6.2
S75433-1|AAB32519.2| 729|Homo sapiens interferon-inducible myel... 27 8.1
M63838-1|AAA58683.1| 729|Homo sapiens interferon-gamma induced ... 27 8.1
EF127492-1|ABO33171.1| 2087|Homo sapiens Rho GTPase-activating p... 27 8.1
BC113429-1|AAI13430.1| 1738|Homo sapiens Rho GTPase-activating p... 27 8.1
BC104898-1|AAI04899.1| 1738|Homo sapiens Rho GTPase-activating p... 27 8.1
BC019825-1|AAH19825.1| 259|Homo sapiens SPON1 protein protein. 27 8.1
BC017059-1|AAH17059.1| 729|Homo sapiens interferon, gamma-induc... 27 8.1
AY358586-1|AAQ88949.1| 180|Homo sapiens AASL548 protein. 27 8.1
AY194287-1|AAO43677.1| 1738|Homo sapiens rac GTPase activating p... 27 8.1
AY138863-1|AAM96005.1| 729|Homo sapiens interferon-inducible IF... 27 8.1
AL359753-11|CAI15085.1| 729|Homo sapiens interferon, gamma-indu... 27 8.1
AL359753-10|CAI15084.1| 729|Homo sapiens interferon, gamma-indu... 27 8.1
AL359753-9|CAI15083.1| 414|Homo sapiens interferon, gamma-induc... 27 8.1
AL359753-8|CAI15082.1| 180|Homo sapiens interferon, gamma-induc... 27 8.1
AL049795-9|CAI22060.1| 180|Homo sapiens chromosome 1 open readi... 27 8.1
AK094968-1|BAC04462.1| 418|Homo sapiens protein ( Homo sapiens ... 27 8.1
AK075260-1|BAC11504.1| 122|Homo sapiens protein ( Homo sapiens ... 27 8.1
AF208043-1|AAF20997.1| 682|Homo sapiens IFI16b protein. 27 8.1
AB208989-1|BAD92226.1| 736|Homo sapiens Interferon, gamma-induc... 27 8.1
AB018255-1|BAA34432.2| 1770|Homo sapiens KIAA0712 protein protein. 27 8.1
>AK026247-1|BAB15410.1| 144|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22594 fis, clone HSI03267. ).
Length = 144
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 249 AEHRCHNTWQRQVGSYFCDEDTAPPLPCG 163
A + C + W++Q+ + C D+APP G
Sbjct: 63 ARYSCSSEWKQQLTCHLCVTDSAPPRHTG 91
>EF036485-1|ABO65071.1| 91|Homo sapiens SRp25 nuclear protein
isoform 3 protein.
Length = 91
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 149 RSSPAPHGRGGAVSSSQK*EPTCRCQVLWHRCSATTSRGRRCSTSASAPSR 301
RS GRG + + T R CSA+TS+GR+ ST+ A R
Sbjct: 6 RSRSRSRGRGSEKRKKKSRKDTSR------NCSASTSQGRKASTAPGAEER 50
>DQ099385-1|AAZ13761.1| 181|Homo sapiens ADP-ribosylation-like
factor 6 interacting protein 4 protein.
Length = 181
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 149 RSSPAPHGRGGAVSSSQK*EPTCRCQVLWHRCSATTSRGRRCSTSASAPSR 301
RS GRG + + T R CSA+TS+GR+ ST+ A R
Sbjct: 11 RSRSRSRGRGSEKRKKKSRKDTSR------NCSASTSQGRKASTAPGAEER 55
>BC094839-1|AAH94839.1| 352|Homo sapiens ADP-ribosylation-like
factor 6 interacting protein 4 protein.
Length = 352
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 149 RSSPAPHGRGGAVSSSQK*EPTCRCQVLWHRCSATTSRGRRCSTSASAPSR 301
RS GRG + + T R CSA+TS+GR+ ST+ A R
Sbjct: 134 RSRSRSRGRGSEKRKKKSRKDTSR------NCSASTSQGRKASTAPGAEER 178
>BC069262-1|AAH69262.1| 900|Homo sapiens INT1 protein protein.
Length = 900
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 129 LDTVLAYARRLPRMGGVAPCPRRKNRNRLVVAKCCGIDARRRRVVE 266
++ +LA A + G A C + R L+++ CCG D R+V E
Sbjct: 446 VELILAEAETRSQDGDTAACSLIQARLPLLLSCCCGDDESVRKVTE 491
>BC037539-1|AAH37539.1| 956|Homo sapiens angiomotin like 1 protein.
Length = 956
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 113 PPWLRLGHCFSIRSSPAPHGRGGAVSSSQK*EPTCRCQVLWHRCSATTSRGRRCSTSASA 292
PP L S ++ + H + G+ SS + + + ++ W ++ SRGR +T A +
Sbjct: 849 PPTSALSSIASTTAASSAHAKTGSKDSSTQTDKSA--ELFWPSMASLPSRGRLSTTPAHS 906
Query: 293 P 295
P
Sbjct: 907 P 907
>BC018777-1|AAH18777.1| 698|Homo sapiens INT1 protein protein.
Length = 698
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 129 LDTVLAYARRLPRMGGVAPCPRRKNRNRLVVAKCCGIDARRRRVVE 266
++ +LA A + G A C + R L+++ CCG D R+V E
Sbjct: 244 VELILAEAETRSQDGDTAACSLIQARLPLLLSCCCGDDESVRKVTE 289
>BC014126-1|AAH14126.1| 498|Homo sapiens Similar to RIKEN cDNA
4932416D09 gene protein.
Length = 498
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 113 PPWLRLGHCFSIRSSPAPHGRGGAVSSSQK*EPTCRCQVLWHRCSATTSRGRRCSTSASA 292
PP L S ++ + H + G+ SS + + + ++ W ++ SRGR +T A +
Sbjct: 391 PPTSALSSIASTTAASSAHAKTGSKDSSTQTDKSA--ELFWPSMASLPSRGRLSTTPAHS 448
Query: 293 P 295
P
Sbjct: 449 P 449
>BC013367-1|AAH13367.2| 809|Homo sapiens INT1 protein protein.
Length = 809
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 129 LDTVLAYARRLPRMGGVAPCPRRKNRNRLVVAKCCGIDARRRRVVE 266
++ +LA A + G A C + R L+++ CCG D R+V E
Sbjct: 355 VELILAEAETRSQDGDTAACSLIQARLPLLLSCCCGDDESVRKVTE 400
>AY358482-1|AAQ88846.1| 1029|Homo sapiens HILV1821 protein.
Length = 1029
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 129 LDTVLAYARRLPRMGGVAPCPRRKNRNRLVVAKCCGIDARRRRVVE 266
++ +LA A + G A C + R L+++ CCG D R+V E
Sbjct: 575 VELILAEAETRSQDGDTAACSLIQARLPLLLSCCCGDDESVRKVTE 620
>AK093699-1|BAC04218.1| 543|Homo sapiens protein ( Homo sapiens
cDNA FLJ36380 fis, clone THYMU2008383. ).
Length = 543
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 113 PPWLRLGHCFSIRSSPAPHGRGGAVSSSQK*EPTCRCQVLWHRCSATTSRGRRCSTSASA 292
PP L S ++ + H + G+ SS + + + ++ W ++ SRGR +T A +
Sbjct: 436 PPTSALSSIASTTAASSAHAKTGSKDSSTQTDKSA--ELFWPSMASLPSRGRLSTTPAHS 493
Query: 293 P 295
P
Sbjct: 494 P 494
>AB037861-1|BAA92678.1| 1377|Homo sapiens KIAA1440 protein protein.
Length = 1377
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 129 LDTVLAYARRLPRMGGVAPCPRRKNRNRLVVAKCCGIDARRRRVVE 266
++ +LA A + G A C + R L+++ CCG D R+V E
Sbjct: 923 VELILAEAETRSQDGDTAACSLIQARLPLLLSCCCGDDESVRKVTE 968
>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
Length = 1317
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 1 GESRTEDASLSGSRRCSLGMVVSVSSCTGSQPSRRQSATMVATWTL 138
G+ AS S S CS G V + GSQ ++Q +T + TL
Sbjct: 498 GDESMTKASDSSSPSCSSGPRVPKGAAPGSQTGKKQQSTALQASTL 543
>BC112278-1|AAI12279.1| 702|Homo sapiens nucleolar protein 9
protein.
Length = 702
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 165 RMGGVAPCPRRKNRNRLVVAKCCGIDAR 248
R+G + C RR+ R RL+ A+ G+D R
Sbjct: 36 RLGSLRWCGRRRLRRRLLQAQAAGVDWR 63
>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 1 GESRTEDASLSGSRRCSLGMVVSVSSCTGSQPSRRQSATMVATWTL 138
G+ AS S S CS G V + GSQ ++Q +T + TL
Sbjct: 448 GDESMTKASDSSSPSCSSGPRVPKGAAPGSQTGKKQQSTALQASTL 493
>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 1 GESRTEDASLSGSRRCSLGMVVSVSSCTGSQPSRRQSATMVATWTL 138
G+ AS S S CS G V + GSQ ++Q +T + TL
Sbjct: 448 GDESMTKASDSSSPSCSSGPRVPKGAAPGSQTGKKQQSTALQASTL 493
>BC110849-1|AAI10850.1| 702|Homo sapiens nucleolar protein 9
protein.
Length = 702
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 165 RMGGVAPCPRRKNRNRLVVAKCCGIDAR 248
R+G + C RR+ R RL+ A+ G+D R
Sbjct: 36 RLGSLRWCGRRRLRRRLLQAQAAGVDWR 63
>BC105095-1|AAI05096.1| 702|Homo sapiens nucleolar protein 9
protein.
Length = 702
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 165 RMGGVAPCPRRKNRNRLVVAKCCGIDAR 248
R+G + C RR+ R RL+ A+ G+D R
Sbjct: 36 RLGSLRWCGRRRLRRRLLQAQAAGVDWR 63
>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 1 GESRTEDASLSGSRRCSLGMVVSVSSCTGSQPSRRQSATMVATWTL 138
G+ AS S S CS G V + GSQ ++Q +T + TL
Sbjct: 448 GDESMTKASDSSSPSCSSGPRVPKGAAPGSQTGKKQQSTALQASTL 493
>BC053845-1|AAH53845.1| 598|Homo sapiens HKR1 protein protein.
Length = 598
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 PHFPAHAGAHWAWLFR*VPAPDHSRADGRVPPW--LRLGHCFSIRSSPAPHGR 175
P+ G H++W H R V P+ L G CFS++S+ H R
Sbjct: 379 PYVCTECGRHFSWKSN---LKTHQRTHSGVKPYVCLECGQCFSLKSNLNKHQR 428
>BC017256-1|AAH17256.1| 659|Homo sapiens GLI-Kruppel family member
HKR1 protein.
Length = 659
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 PHFPAHAGAHWAWLFR*VPAPDHSRADGRVPPW--LRLGHCFSIRSSPAPHGR 175
P+ G H++W H R V P+ L G CFS++S+ H R
Sbjct: 440 PYVCTECGRHFSWKSN---LKTHQRTHSGVKPYVCLECGQCFSLKSNLNKHQR 489
>BC004513-1|AAH04513.2| 422|Homo sapiens HKR1 protein protein.
Length = 422
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 PHFPAHAGAHWAWLFR*VPAPDHSRADGRVPPW--LRLGHCFSIRSSPAPHGR 175
P+ G H++W H R V P+ L G CFS++S+ H R
Sbjct: 203 PYVCTECGRHFSWKSN---LKTHQRTHSGVKPYVCLECGQCFSLKSNLNKHQR 252
>AK223616-1|BAD97336.1| 730|Homo sapiens Krueppel-related zinc
finger protein 1 (HKR1 protein) variant protein.
Length = 730
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 PHFPAHAGAHWAWLFR*VPAPDHSRADGRVPPW--LRLGHCFSIRSSPAPHGR 175
P+ G H++W H R V P+ L G CFS++S+ H R
Sbjct: 476 PYVCTECGRHFSWKSN---LKTHQRTHSGVKPYVCLECGQCFSLKSNLNKHQR 525
>AK056076-1|BAB71089.1| 685|Homo sapiens protein ( Homo sapiens
cDNA FLJ31514 fis, clone NT2RI1000164. ).
Length = 685
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 257 SSSPSIDATTLGNDKSVPIFATRTRRHP 174
SSSPS D+TT G+ +P +T T R P
Sbjct: 8 SSSPSDDSTTSGSLPELPPTSTATSRSP 35
>AB013897-1|BAA86058.1| 697|Homo sapiens HKR1 protein.
Length = 697
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 PHFPAHAGAHWAWLFR*VPAPDHSRADGRVPPW--LRLGHCFSIRSSPAPHGR 175
P+ G H++W H R V P+ L G CFS++S+ H R
Sbjct: 478 PYVCTECGRHFSWKSN---LKTHQRTHSGVKPYVCLECGQCFSLKSNLNKHQR 527
>M60298-1|AAA74589.1| 721|Homo sapiens erythrocyte membrane protein
protein.
Length = 721
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -2
Query: 235 PQHLATTSRFLFLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSP 68
PQ AT L +R G+ P +R + V Q W +AV V+RC P
Sbjct: 261 PQTQATQEGALLNKR-RGSVPILRQWLTGRGRPVYDGQAWVLAAVACTVLRCLGIP 315
>M30647-1|AAA36401.1| 721|Homo sapiens protein ( Human erythrocyte
membrane protein 4.2 (P4.2L) mRNA, complete cds. ).
Length = 721
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -2
Query: 235 PQHLATTSRFLFLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSP 68
PQ AT L +R G+ P +R + V Q W +AV V+RC P
Sbjct: 261 PQTQATQEGALLNKR-RGSVPILRQWLTGRGRPVYDGQAWVLAAVACTVLRCLGIP 315
>M30646-1|AAA36402.1| 691|Homo sapiens protein ( Human erythrocyte
membrane protein 4.2 (P4.2S) mRNA, complete cds. ).
Length = 691
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -2
Query: 235 PQHLATTSRFLFLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSP 68
PQ AT L +R G+ P +R + V Q W +AV V+RC P
Sbjct: 231 PQTQATQEGALLNKR-RGSVPILRQWLTGRGRPVYDGQAWVLAAVACTVLRCLGIP 285
>M29399-1|AAA35798.1| 691|Homo sapiens protein ( Human erythrocyte
membrane protein band 4.2 mRNA, complete cds. ).
Length = 691
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -2
Query: 235 PQHLATTSRFLFLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSP 68
PQ AT L +R G+ P +R + V Q W +AV V+RC P
Sbjct: 231 PQTQATQEGALLNKR-RGSVPILRQWLTGRGRPVYDGQAWVLAAVACTVLRCLGIP 285
>L06519-1|AAA52385.1| 721|Homo sapiens protein ( Human erythrocyte
membrane protein band 4.2 gene, exon 13. ).
Length = 721
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -2
Query: 235 PQHLATTSRFLFLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSP 68
PQ AT L +R G+ P +R + V Q W +AV V+RC P
Sbjct: 261 PQTQATQEGALLNKR-RGSVPILRQWLTGRGRPVYDGQAWVLAAVACTVLRCLGIP 315
>BC099627-1|AAH99627.1| 619|Homo sapiens EPB42 protein protein.
Length = 619
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -2
Query: 235 PQHLATTSRFLFLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSP 68
PQ AT L +R G+ P +R + V Q W +AV V+RC P
Sbjct: 231 PQTQATQEGALLNKR-RGSVPILRQWLTGRGRPVYDGQAWVLAAVACTVLRCLGIP 285
>BC096094-1|AAH96094.1| 691|Homo sapiens EPB42 protein protein.
Length = 691
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -2
Query: 235 PQHLATTSRFLFLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSP 68
PQ AT L +R G+ P +R + V Q W +AV V+RC P
Sbjct: 231 PQTQATQEGALLNKR-RGSVPILRQWLTGRGRPVYDGQAWVLAAVACTVLRCLGIP 285
>BC096093-1|AAH96093.1| 691|Homo sapiens EPB42 protein protein.
Length = 691
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -2
Query: 235 PQHLATTSRFLFLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSP 68
PQ AT L +R G+ P +R + V Q W +AV V+RC P
Sbjct: 231 PQTQATQEGALLNKR-RGSVPILRQWLTGRGRPVYDGQAWVLAAVACTVLRCLGIP 285
>AL356095-14|CAI40450.1| 87|Homo sapiens placenta-specific 9
protein.
Length = 87
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 169 MRGRRRAYAKTVSKSQPW-WHSAVGSAVIRCRNSPKQPCPV 50
M +RR S+PW W AVG + QPCP+
Sbjct: 43 MAVQRRLDVMEEMASEPWSWSPAVGGGAPARQRPQNQPCPL 83
>AB064151-1|BAC01779.1| 273|Homo sapiens immunoglobulin lambda
light chain VLJ region protein.
Length = 273
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 233 TTLGNDKSVP-IFATRTRRHPSHAGQATSVC*NSVQVATMVALCRRLGCDPVQELTETTM 57
T LG K+ P + A +AT VC S V + R+ PV+ ETT
Sbjct: 130 TVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVARKADSSPVKAGVETTT 189
Query: 56 PSE 48
PS+
Sbjct: 190 PSK 192
>S75433-1|AAB32519.2| 729|Homo sapiens interferon-inducible myeloid
differentiation transcriptional activator protein.
Length = 729
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 210 GSYFCDEDTAPPLPCGAGDERMLKQCPS 127
GS +E T PP P GAG + + PS
Sbjct: 141 GSKVSEEQTQPPSPAGAGMSTAMGRSPS 168
>M63838-1|AAA58683.1| 729|Homo sapiens interferon-gamma induced
protein protein.
Length = 729
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 210 GSYFCDEDTAPPLPCGAGDERMLKQCPS 127
GS +E T PP P GAG + + PS
Sbjct: 141 GSKVSEEQTQPPSPAGAGMSTAMGRSPS 168
>EF127492-1|ABO33171.1| 2087|Homo sapiens Rho GTPase-activating
protein protein.
Length = 2087
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 246 EHRCHNTWQRQVGSYFCDEDTAPPLPCGAG 157
EHR H Q FC+ PP P GAG
Sbjct: 1876 EHRAH---QEASHRQFCESKNGPPYPQGAG 1902
>BC113429-1|AAI13430.1| 1738|Homo sapiens Rho GTPase-activating
protein protein.
Length = 1738
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 246 EHRCHNTWQRQVGSYFCDEDTAPPLPCGAG 157
EHR H Q FC+ PP P GAG
Sbjct: 1527 EHRAH---QEASHRQFCESKNGPPYPQGAG 1553
>BC104898-1|AAI04899.1| 1738|Homo sapiens Rho GTPase-activating
protein protein.
Length = 1738
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 246 EHRCHNTWQRQVGSYFCDEDTAPPLPCGAG 157
EHR H Q FC+ PP P GAG
Sbjct: 1527 EHRAH---QEASHRQFCESKNGPPYPQGAG 1553
>BC019825-1|AAH19825.1| 259|Homo sapiens SPON1 protein protein.
Length = 259
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 105 AECHHGCDLDTVLA--YARRLPRMGGVAPCPRRKNRNRLVVAKC 230
+EC+ C V+ + P+ GG APCP R + + KC
Sbjct: 130 SECNKSCGKGHVIRTRMTQMEPQFGG-APCPETVQRKKCRIRKC 172
>BC017059-1|AAH17059.1| 729|Homo sapiens interferon,
gamma-inducible protein 16 protein.
Length = 729
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 210 GSYFCDEDTAPPLPCGAGDERMLKQCPS 127
GS +E T PP P GAG + + PS
Sbjct: 141 GSKVSEEQTQPPSPAGAGMSTAMGRSPS 168
>AY358586-1|AAQ88949.1| 180|Homo sapiens AASL548 protein.
Length = 180
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 229 VVASMLGDDESWKAMLDFCEC 291
+V LG+D K LD+CEC
Sbjct: 97 IVGKALGEDIGGKRKLDYCEC 117
>AY194287-1|AAO43677.1| 1738|Homo sapiens rac GTPase activating
protein protein.
Length = 1738
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 246 EHRCHNTWQRQVGSYFCDEDTAPPLPCGAG 157
EHR H Q FC+ PP P GAG
Sbjct: 1527 EHRAH---QEASHRQFCESKNGPPYPQGAG 1553
>AY138863-1|AAM96005.1| 729|Homo sapiens interferon-inducible IFI
16 protein.
Length = 729
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 210 GSYFCDEDTAPPLPCGAGDERMLKQCPS 127
GS +E T PP P GAG + + PS
Sbjct: 141 GSKVSEEQTQPPSPAGAGMSTAMGRSPS 168
>AL359753-11|CAI15085.1| 729|Homo sapiens interferon,
gamma-inducible protein 16 protein.
Length = 729
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 210 GSYFCDEDTAPPLPCGAGDERMLKQCPS 127
GS +E T PP P GAG + + PS
Sbjct: 141 GSKVSEEQTQPPSPAGAGMSTAMGRSPS 168
>AL359753-10|CAI15084.1| 729|Homo sapiens interferon,
gamma-inducible protein 16 protein.
Length = 729
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 210 GSYFCDEDTAPPLPCGAGDERMLKQCPS 127
GS +E T PP P GAG + + PS
Sbjct: 141 GSKVSEEQTQPPSPAGAGMSTAMGRSPS 168
>AL359753-9|CAI15083.1| 414|Homo sapiens interferon,
gamma-inducible protein 16 protein.
Length = 414
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 210 GSYFCDEDTAPPLPCGAGDERMLKQCPS 127
GS +E T PP P GAG + + PS
Sbjct: 141 GSKVSEEQTQPPSPAGAGMSTAMGRSPS 168
>AL359753-8|CAI15082.1| 180|Homo sapiens interferon,
gamma-inducible protein 16 protein.
Length = 180
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 210 GSYFCDEDTAPPLPCGAGDERMLKQCPS 127
GS +E T PP P GAG + + PS
Sbjct: 141 GSKVSEEQTQPPSPAGAGMSTAMGRSPS 168
>AL049795-9|CAI22060.1| 180|Homo sapiens chromosome 1 open reading
frame 91 protein.
Length = 180
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 229 VVASMLGDDESWKAMLDFCEC 291
+V LG+D K LD+CEC
Sbjct: 97 IVGKALGEDIGGKRKLDYCEC 117
>AK094968-1|BAC04462.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ37649 fis, clone BRHIP2000534, moderately
similar to GAMMA-INTERFERON-INDUCIBLE PROTEIN IFI-16. ).
Length = 418
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 210 GSYFCDEDTAPPLPCGAGDERMLKQCPS 127
GS +E T PP P GAG + + PS
Sbjct: 145 GSKVSEEQTQPPSPAGAGMSTAMGRSPS 172
>AK075260-1|BAC11504.1| 122|Homo sapiens protein ( Homo sapiens
cDNA FLJ90779 fis, clone THYRO1001205. ).
Length = 122
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 229 VVASMLGDDESWKAMLDFCEC 291
+V LG+D K LD+CEC
Sbjct: 39 IVGKALGEDIGGKRKLDYCEC 59
>AF208043-1|AAF20997.1| 682|Homo sapiens IFI16b protein.
Length = 682
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 210 GSYFCDEDTAPPLPCGAGDERMLKQCPS 127
GS +E T PP P GAG + + PS
Sbjct: 141 GSKVSEEQTQPPSPAGAGMSTAMGRSPS 168
>AB208989-1|BAD92226.1| 736|Homo sapiens Interferon,
gamma-inducible protein 16 variant protein.
Length = 736
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 210 GSYFCDEDTAPPLPCGAGDERMLKQCPS 127
GS +E T PP P GAG + + PS
Sbjct: 148 GSKVSEEQTQPPSPAGAGMSTAMGRSPS 175
>AB018255-1|BAA34432.2| 1770|Homo sapiens KIAA0712 protein protein.
Length = 1770
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 246 EHRCHNTWQRQVGSYFCDEDTAPPLPCGAG 157
EHR H Q FC+ PP P GAG
Sbjct: 1559 EHRAH---QEASHRQFCESKNGPPYPQGAG 1585
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,851,772
Number of Sequences: 237096
Number of extensions: 1252048
Number of successful extensions: 4604
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 4171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4604
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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