Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6284
         (302 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ278684-2|CAB99192.1|  989|Drosophila melanogaster endonuclease...    33   0.092
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros...    29   1.1  
AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-P...    27   3.4  
AY069358-1|AAL39503.1|  532|Drosophila melanogaster LD06275p pro...    27   4.6  
AE014297-2565|AAF55582.1|  726|Drosophila melanogaster CG7706-PA...    27   4.6  
M21070-1|AAA28409.1|  472|Drosophila melanogaster protein ( D.me...    26   8.0  
BT023767-1|AAZ41775.1| 1144|Drosophila melanogaster RE11051p pro...    26   8.0  
AM294118-1|CAL26022.1|  174|Drosophila melanogaster CG14926 prot...    26   8.0  
AM294117-1|CAL26021.1|  174|Drosophila melanogaster CG14926 prot...    26   8.0  
AM294116-1|CAL26020.1|  174|Drosophila melanogaster CG14926 prot...    26   8.0  
AM294115-1|CAL26019.1|  174|Drosophila melanogaster CG14926 prot...    26   8.0  
AM294114-1|CAL26018.1|  182|Drosophila melanogaster CG14926 prot...    26   8.0  
AM294113-1|CAL26017.1|  174|Drosophila melanogaster CG14926 prot...    26   8.0  
AM294112-1|CAL26016.1|  182|Drosophila melanogaster CG14926 prot...    26   8.0  
AM294111-1|CAL26015.1|  174|Drosophila melanogaster CG14926 prot...    26   8.0  
AM294109-1|CAL26013.1|  174|Drosophila melanogaster CG14926 prot...    26   8.0  
AF143207-1|AAF36532.1| 1144|Drosophila melanogaster IF2 protein ...    26   8.0  
AE014296-661|AAF47774.2| 1144|Drosophila melanogaster CG10840-PB...    26   8.0  
AE014134-2063|AAF53095.1|  174|Drosophila melanogaster CG14926-P...    26   8.0  

>AJ278684-2|CAB99192.1|  989|Drosophila melanogaster
           endonuclease/reverse transcriptase protein.
          Length = 989

 Score = 32.7 bits (71), Expect = 0.092
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 30  FRLTQVLTGHGCFGEFLHRITAEPTAECHHGCD 128
           + +TQ LT HGCF  +L R     TA+C +  D
Sbjct: 886 YHMTQFLTDHGCFRGYLCRFRHVDTAQCLYCTD 918


>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
            Drosophila melanogasterDNA for type I retrotransposable
            element  R1Dm.  ).
          Length = 1021

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 27   TFRLTQVLTGHGCFGEFLHRITAEPTAECHHG 122
            + R + +LTGHG F  FLH      T  C  G
Sbjct: 927  SMRTSFLLTGHGSFNAFLHGRALSDTTACACG 958


>AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-PA
           protein.
          Length = 1895

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 89  HSRADGRVPPWLRLGHCFSIRSSPAPHGRGGAV 187
           HS       P ++ G+  + ++SP PH  GGAV
Sbjct: 724 HSHPHPHPHPGMQAGNPMASKNSPQPHRLGGAV 756


>AY069358-1|AAL39503.1|  532|Drosophila melanogaster LD06275p
           protein.
          Length = 532

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -1

Query: 275 SIAFHDSSSPSIDATTLGNDKSVPIFATRTRR 180
           S    DSS+P+ D T   ND S P  A + RR
Sbjct: 449 STPVEDSSAPAEDITARANDTSEPEEAQKKRR 480


>AE014297-2565|AAF55582.1|  726|Drosophila melanogaster CG7706-PA
           protein.
          Length = 726

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -1

Query: 275 SIAFHDSSSPSIDATTLGNDKSVPIFATRTRR 180
           S    DSS+P+ D T   ND S P  A + RR
Sbjct: 643 STPVEDSSAPAEDITARANDTSEPEEAQKKRR 674


>M21070-1|AAA28409.1|  472|Drosophila melanogaster protein (
           D.melanogaster caudalgene (cad) encoding a maternal and
           zygotic transcript,exon 2. ).
          Length = 472

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +1

Query: 37  SRRCSLGMVVSVSSCTGSQPSRRQSATMVATWTLF*HTLVACPAWEGWRR 186
           S + SL    + S C  + P  R++AT+  TW+      V    W   RR
Sbjct: 383 SAQMSLRAQWARSRCDTTIPVMRRAATVTTTWSPIIRCWVVASGWSRRRR 432


>BT023767-1|AAZ41775.1| 1144|Drosophila melanogaster RE11051p
           protein.
          Length = 1144

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -3

Query: 291 ALAEVEHRLPRLVVAEHRCHNTWQ--RQVGSYFCD 193
           A A  EHRLP L++ +   H ++   R  GS  CD
Sbjct: 611 AAAGFEHRLPGLLIIDTPGHESFSNLRNRGSSLCD 645


>AM294118-1|CAL26022.1|  174|Drosophila melanogaster CG14926
           protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 202 FLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQP 59
           + + G G+TPP  G R+    + + +Q + H + G    +   SP  P
Sbjct: 21  YSQMGRGSTPPGGGGRQWLHSSQANTQNYLHGSSGMGSHQNNASPGDP 68


>AM294117-1|CAL26021.1|  174|Drosophila melanogaster CG14926
           protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 202 FLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQP 59
           + + G G+TPP  G R+    + + +Q + H + G    +   SP  P
Sbjct: 21  YSQMGRGSTPPGGGGRQWLHSSQANTQNYLHGSSGMGSHQNNASPGDP 68


>AM294116-1|CAL26020.1|  174|Drosophila melanogaster CG14926
           protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 202 FLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQP 59
           + + G G+TPP  G R+    + + +Q + H + G    +   SP  P
Sbjct: 21  YSQMGRGSTPPGGGGRQWLHSSQANTQNYLHGSSGMGSHQNNASPGDP 68


>AM294115-1|CAL26019.1|  174|Drosophila melanogaster CG14926
           protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 202 FLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQP 59
           + + G G+TPP  G R+    + + +Q + H + G    +   SP  P
Sbjct: 21  YSQMGRGSTPPGGGGRQWLHSSQANTQNYLHGSSGMGSHQNNASPGDP 68


>AM294114-1|CAL26018.1|  182|Drosophila melanogaster CG14926
           protein.
          Length = 182

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 202 FLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQP 59
           + + G G+TPP  G R+    + + +Q + H + G    +   SP  P
Sbjct: 21  YSQMGRGSTPPGGGGRQWLHSSQANTQNYLHGSSGMGSHQNNASPGDP 68


>AM294113-1|CAL26017.1|  174|Drosophila melanogaster CG14926
           protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 202 FLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQP 59
           + + G G+TPP  G R+    + + +Q + H + G    +   SP  P
Sbjct: 21  YSQMGRGSTPPGGGGRQWLHSSQANTQNYLHGSSGMGSHQNNASPGDP 68


>AM294112-1|CAL26016.1|  182|Drosophila melanogaster CG14926
           protein.
          Length = 182

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 202 FLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQP 59
           + + G G+TPP  G R+    + + +Q + H + G    +   SP  P
Sbjct: 21  YSQMGRGSTPPGGGGRQWLHSSQANTQNYLHGSSGMGSHQNNASPGDP 68


>AM294111-1|CAL26015.1|  174|Drosophila melanogaster CG14926
           protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 202 FLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQP 59
           + + G G+TPP  G R+    + + +Q + H + G    +   SP  P
Sbjct: 21  YSQMGRGSTPPGGGGRQWLHSSQANTQNYLHGSSGMGSHQNNASPGDP 68


>AM294109-1|CAL26013.1|  174|Drosophila melanogaster CG14926
           protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 202 FLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQP 59
           + + G G+TPP  G R+    + + +Q + H + G    +   SP  P
Sbjct: 21  YSQMGRGSTPPGGGGRQWLHSSQANTQNYLHGSSGMGSHQNNASPGDP 68


>AF143207-1|AAF36532.1| 1144|Drosophila melanogaster IF2 protein
           protein.
          Length = 1144

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -3

Query: 291 ALAEVEHRLPRLVVAEHRCHNTWQ--RQVGSYFCD 193
           A A  EHRLP L++ +   H ++   R  GS  CD
Sbjct: 611 AAAGFEHRLPGLLIIDTPGHESFSNLRNRGSSLCD 645


>AE014296-661|AAF47774.2| 1144|Drosophila melanogaster CG10840-PB
           protein.
          Length = 1144

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -3

Query: 291 ALAEVEHRLPRLVVAEHRCHNTWQ--RQVGSYFCD 193
           A A  EHRLP L++ +   H ++   R  GS  CD
Sbjct: 611 AAAGFEHRLPGLLIIDTPGHESFSNLRNRGSSLCD 645


>AE014134-2063|AAF53095.1|  174|Drosophila melanogaster CG14926-PA
           protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 202 FLRRGHGATPPMRGRRRAYAKTVSKSQPWWHSAVGSAVIRCRNSPKQP 59
           + + G G+TPP  G R+    + + +Q + H + G    +   SP  P
Sbjct: 21  YSQMGRGSTPPGGGGRQWLHSSQANTQNYLHGSSGMGSHQNNASPGDP 68


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,185,588
Number of Sequences: 53049
Number of extensions: 404195
Number of successful extensions: 1412
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1412
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)