Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6279
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009863-1|AAH09863.1| 302|Homo sapiens deoxyhypusine hydroxyla... 214 3e-55
BC002817-1|AAH02817.1| 302|Homo sapiens deoxyhypusine hydroxyla... 214 3e-55
AC005551-5|AAC33193.1| 197|Homo sapiens R26529_2, partial CDS p... 100 5e-21
AJ617479-1|CAE84581.1| 754|Homo sapiens activator interaction d... 31 4.3
>BC009863-1|AAH09863.1| 302|Homo sapiens deoxyhypusine
hydroxylase/monooxygenase protein.
Length = 302
Score = 214 bits (522), Expect = 3e-55
Identities = 104/181 (57%), Positives = 131/181 (72%)
Frame = +1
Query: 115 VSENAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKHELAYC 294
V+E V IG L DP +P++ RFRALFTLR +GG AI IS+ F D+S LLKHELAYC
Sbjct: 2 VTEQEVDAIGQTLVDPKQPLQARFRALFTLRGLGGPGAIAWISQAFDDDSALLKHELAYC 61
Query: 295 LGQMQDRRAIPILRSVLEDPNHDPIVRHEAGEALGAIGDPNLRELLEKYQHDSAIEVAET 474
LGQMQD RAIP+L VL+D +P+VRHEAGEALGAIGDP + E+L++Y D IEVAET
Sbjct: 62 LGQMQDARAIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSSDPVIEVAET 121
Query: 475 CQIALQRLNWVANDSKENDNLSKSLYTSVDPAPPSIENNLEALKDVYLDETKPLFIRYRA 654
CQ+A++RL W+ E + Y SVDPAPP+ E ++ L++ LDE++PLF RYRA
Sbjct: 122 CQLAVRRLEWLQQHGGEP---AAGPYLSVDPAPPAEERDVGRLREALLDESRPLFERYRA 178
Query: 655 M 657
M
Sbjct: 179 M 179
Score = 100 bits (240), Expect = 5e-21
Identities = 52/123 (42%), Positives = 70/123 (56%)
Frame = +1
Query: 121 ENAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKHELAYCLG 300
E V + L D SRP+ ER+RA+F LRN GGE A ++E S L +HE+ Y LG
Sbjct: 155 ERDVGRLREALLDESRPLFERYRAMFALRNAGGEEAALALAEGLHCGSALFRHEVGYVLG 214
Query: 301 QMQDRRAIPILRSVLEDPNHDPIVRHEAGEALGAIGDPNLRELLEKYQHDSAIEVAETCQ 480
Q+Q A+P L + L +P+VRHE EALGAI P L+ + D V E+C+
Sbjct: 215 QLQHEAAVPQLAAALARCTENPMVRHECAEALGAIARPACLAALQAHADDPERVVRESCE 274
Query: 481 IAL 489
+AL
Sbjct: 275 VAL 277
>BC002817-1|AAH02817.1| 302|Homo sapiens deoxyhypusine
hydroxylase/monooxygenase protein.
Length = 302
Score = 214 bits (522), Expect = 3e-55
Identities = 104/181 (57%), Positives = 131/181 (72%)
Frame = +1
Query: 115 VSENAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKHELAYC 294
V+E V IG L DP +P++ RFRALFTLR +GG AI IS+ F D+S LLKHELAYC
Sbjct: 2 VTEQEVDAIGQTLVDPKQPLQARFRALFTLRGLGGPGAIAWISQAFDDDSALLKHELAYC 61
Query: 295 LGQMQDRRAIPILRSVLEDPNHDPIVRHEAGEALGAIGDPNLRELLEKYQHDSAIEVAET 474
LGQMQD RAIP+L VL+D +P+VRHEAGEALGAIGDP + E+L++Y D IEVAET
Sbjct: 62 LGQMQDARAIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSSDPVIEVAET 121
Query: 475 CQIALQRLNWVANDSKENDNLSKSLYTSVDPAPPSIENNLEALKDVYLDETKPLFIRYRA 654
CQ+A++RL W+ E + Y SVDPAPP+ E ++ L++ LDE++PLF RYRA
Sbjct: 122 CQLAVRRLEWLQQHGGEP---AAGPYLSVDPAPPAEERDVGRLREALLDESRPLFERYRA 178
Query: 655 M 657
M
Sbjct: 179 M 179
Score = 100 bits (240), Expect = 5e-21
Identities = 52/123 (42%), Positives = 70/123 (56%)
Frame = +1
Query: 121 ENAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKHELAYCLG 300
E V + L D SRP+ ER+RA+F LRN GGE A ++E S L +HE+ Y LG
Sbjct: 155 ERDVGRLREALLDESRPLFERYRAMFALRNAGGEEAALALAEGLHCGSALFRHEVGYVLG 214
Query: 301 QMQDRRAIPILRSVLEDPNHDPIVRHEAGEALGAIGDPNLRELLEKYQHDSAIEVAETCQ 480
Q+Q A+P L + L +P+VRHE EALGAI P L+ + D V E+C+
Sbjct: 215 QLQHEAAVPQLAAALARCTENPMVRHECAEALGAIARPACLAALQAHADDPERVVRESCE 274
Query: 481 IAL 489
+AL
Sbjct: 275 VAL 277
>AC005551-5|AAC33193.1| 197|Homo sapiens R26529_2, partial CDS
protein.
Length = 197
Score = 100 bits (240), Expect = 5e-21
Identities = 52/123 (42%), Positives = 70/123 (56%)
Frame = +1
Query: 121 ENAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKHELAYCLG 300
E V + L D SRP+ ER+RA+F LRN GGE A ++E S L +HE+ Y LG
Sbjct: 50 ERDVGRLREALLDESRPLFERYRAMFALRNAGGEEAALALAEGLHCGSALFRHEVGYVLG 109
Query: 301 QMQDRRAIPILRSVLEDPNHDPIVRHEAGEALGAIGDPNLRELLEKYQHDSAIEVAETCQ 480
Q+Q A+P L + L +P+VRHE EALGAI P L+ + D V E+C+
Sbjct: 110 QLQHEAAVPQLAAALARCTENPMVRHECAEALGAIARPACLAALQAHADDPERVVRESCE 169
Query: 481 IAL 489
+AL
Sbjct: 170 VAL 172
Score = 77.4 bits (182), Expect = 5e-14
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +1
Query: 427 LLEKYQHDSAIEVAETCQIALQRLNWVANDSKENDNLSKSLYTSVDPAPPSIENNLEALK 606
+L++Y D IEVAETCQ+A++RL W+ E + Y SVDPAPP+ E ++ L+
Sbjct: 1 ILKQYSSDPVIEVAETCQLAVRRLEWLQQHGGEP---AAGPYLSVDPAPPAEERDVGRLR 57
Query: 607 DVYLDETKPLFIRYRAM 657
+ LDE++PLF RYRAM
Sbjct: 58 EALLDESRPLFERYRAM 74
>AJ617479-1|CAE84581.1| 754|Homo sapiens activator interaction
domain 1 protein protein.
Length = 754
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 425 SRRLGSPIAPRASPASWRTIGSWFGSSNTLLN 330
S+ GSP + SPASWRT SW S + N
Sbjct: 720 SKNEGSP-SRACSPASWRTTSSWISSESPTPN 750
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,759,628
Number of Sequences: 237096
Number of extensions: 2038713
Number of successful extensions: 4093
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4083
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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