Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6279
         (732 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118500-1|AAM49869.1|  302|Drosophila melanogaster LD09536p pro...   208   4e-54
AE014297-4797|AAF57189.1|  302|Drosophila melanogaster CG2245-PA...   208   4e-54
BT003245-1|AAO25002.1|  709|Drosophila melanogaster LD36812p pro...    33   0.53 
AE014297-3647|AAS65213.1|  665|Drosophila melanogaster CG7012-PB...    33   0.53 
AE014297-3646|AAF56349.2|  695|Drosophila melanogaster CG7012-PA...    33   0.53 
AF145304-1|AAF08385.1|  919|Drosophila melanogaster 26S proteaso...    30   2.8  
AF132182-1|AAD34770.1|  919|Drosophila melanogaster unknown prot...    30   2.8  
AE014296-3245|AAF49095.2|  919|Drosophila melanogaster CG7762-PA...    30   2.8  
AY052111-1|AAK93535.1|  522|Drosophila melanogaster SD05804p pro...    29   8.6  
AF109308-1|AAD16981.1|  514|Drosophila melanogaster putative G-p...    29   8.6  
AE014296-2358|AAX52746.1| 1052|Drosophila melanogaster CG32134-P...    29   8.6  
AE014296-2357|AAF49759.1| 1052|Drosophila melanogaster CG32134-P...    29   8.6  
AE014296-90|AAF47379.2|  514|Drosophila melanogaster CG6936-PA, ...    29   8.6  
AE014296-89|AAN11440.1|  522|Drosophila melanogaster CG6936-PB, ...    29   8.6  

>AY118500-1|AAM49869.1|  302|Drosophila melanogaster LD09536p
           protein.
          Length = 302

 Score =  208 bits (509), Expect = 4e-54
 Identities = 100/182 (54%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
 Frame = +1

Query: 115 VSENAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKHELAYC 294
           VS+  ++ IG VLN+  RP+KERFRALFTL+NIGG  AI+ IS+ F D+S LLKHELAYC
Sbjct: 2   VSQQQIEAIGGVLNNKERPLKERFRALFTLKNIGGGAAIEAISKAFDDDSALLKHELAYC 61

Query: 295 LGQMQDRRAIPILRSVLEDPNHDPIVRHEAGEALGAIGDPNLRELLEKYQHDSAIEVAET 474
           LGQMQD +A+ IL  VL+D   +P+VRHEA EA+GAIG P++  +LE+Y+ D  +EVAET
Sbjct: 62  LGQMQDAQALDILTKVLKDTTQEPMVRHEAAEAMGAIGHPDVLPILEEYKQDPVVEVAET 121

Query: 475 CQIALQRLNWVANDSKENDNLSKSLYTSVDPAPPSI-ENNLEALKDVYLDETKPLFIRYR 651
           C IAL R+ W+ +  K +D+   + Y SVDP+PP+  + ++  LK +YLD  + LF RYR
Sbjct: 122 CAIALDRVRWLQSGQKVDDS---NPYASVDPSPPTAGDKSVTELKAIYLDAQQSLFDRYR 178

Query: 652 AM 657
           AM
Sbjct: 179 AM 180



 Score = 98.3 bits (234), Expect = 9e-21
 Identities = 48/123 (39%), Positives = 76/123 (61%)
 Frame = +1

Query: 121 ENAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKHELAYCLG 300
           + +V  +  +  D  + + +R+RA+F+LRN+  E ++  I+E  KD S L +HE+A+ LG
Sbjct: 156 DKSVTELKAIYLDAQQSLFDRYRAMFSLRNLRTEESVLAIAEGLKDSSALFRHEVAFVLG 215

Query: 301 QMQDRRAIPILRSVLEDPNHDPIVRHEAGEALGAIGDPNLRELLEKYQHDSAIEVAETCQ 480
           Q+Q+  +IP L+  LED   + +VRHE  EALGAI   +  ++L +Y  D    V E+C 
Sbjct: 216 QLQEPCSIPFLQENLEDRLENEMVRHECAEALGAIATEDCIQILNRYAEDDKRVVKESCV 275

Query: 481 IAL 489
           IAL
Sbjct: 276 IAL 278



 Score = 33.5 bits (73), Expect = 0.30
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +2

Query: 659 FSLRNLGTTESINALGEGLKANSA 730
           FSLRNL T ES+ A+ EGLK +SA
Sbjct: 181 FSLRNLRTEESVLAIAEGLKDSSA 204


>AE014297-4797|AAF57189.1|  302|Drosophila melanogaster CG2245-PA
           protein.
          Length = 302

 Score =  208 bits (509), Expect = 4e-54
 Identities = 100/182 (54%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
 Frame = +1

Query: 115 VSENAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKHELAYC 294
           VS+  ++ IG VLN+  RP+KERFRALFTL+NIGG  AI+ IS+ F D+S LLKHELAYC
Sbjct: 2   VSQQQIEAIGGVLNNKERPLKERFRALFTLKNIGGGAAIEAISKAFDDDSALLKHELAYC 61

Query: 295 LGQMQDRRAIPILRSVLEDPNHDPIVRHEAGEALGAIGDPNLRELLEKYQHDSAIEVAET 474
           LGQMQD +A+ IL  VL+D   +P+VRHEA EA+GAIG P++  +LE+Y+ D  +EVAET
Sbjct: 62  LGQMQDAQALDILTKVLKDTTQEPMVRHEAAEAMGAIGHPDVLPILEEYKQDPVVEVAET 121

Query: 475 CQIALQRLNWVANDSKENDNLSKSLYTSVDPAPPSI-ENNLEALKDVYLDETKPLFIRYR 651
           C IAL R+ W+ +  K +D+   + Y SVDP+PP+  + ++  LK +YLD  + LF RYR
Sbjct: 122 CAIALDRVRWLQSGQKVDDS---NPYASVDPSPPTAGDKSVTELKAIYLDAQQSLFDRYR 178

Query: 652 AM 657
           AM
Sbjct: 179 AM 180



 Score = 98.3 bits (234), Expect = 9e-21
 Identities = 48/123 (39%), Positives = 76/123 (61%)
 Frame = +1

Query: 121 ENAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKHELAYCLG 300
           + +V  +  +  D  + + +R+RA+F+LRN+  E ++  I+E  KD S L +HE+A+ LG
Sbjct: 156 DKSVTELKAIYLDAQQSLFDRYRAMFSLRNLRTEESVLAIAEGLKDSSALFRHEVAFVLG 215

Query: 301 QMQDRRAIPILRSVLEDPNHDPIVRHEAGEALGAIGDPNLRELLEKYQHDSAIEVAETCQ 480
           Q+Q+  +IP L+  LED   + +VRHE  EALGAI   +  ++L +Y  D    V E+C 
Sbjct: 216 QLQEPCSIPFLQENLEDRLENEMVRHECAEALGAIATEDCIQILNRYAEDDKRVVKESCV 275

Query: 481 IAL 489
           IAL
Sbjct: 276 IAL 278



 Score = 33.5 bits (73), Expect = 0.30
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +2

Query: 659 FSLRNLGTTESINALGEGLKANSA 730
           FSLRNL T ES+ A+ EGLK +SA
Sbjct: 181 FSLRNLRTEESVLAIAEGLKDSSA 204


>BT003245-1|AAO25002.1|  709|Drosophila melanogaster LD36812p
           protein.
          Length = 709

 Score = 32.7 bits (71), Expect = 0.53
 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = +1

Query: 451 SAIEVAETCQIALQRLNWVAN--DSKENDNLS-KSLYTSVDPAPPSIENNLEAL 603
           S +  A   ++ ++R N++ N   SK  D L  +++Y ++ P  P+IENNLE +
Sbjct: 222 SFMSAAVNTEVCMRRTNFINNLGGSKYCDPLEGRNVYATLYPRKPAIENNLETV 275


>AE014297-3647|AAS65213.1|  665|Drosophila melanogaster CG7012-PB,
           isoform B protein.
          Length = 665

 Score = 32.7 bits (71), Expect = 0.53
 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = +1

Query: 451 SAIEVAETCQIALQRLNWVAN--DSKENDNLS-KSLYTSVDPAPPSIENNLEAL 603
           S +  A   ++ ++R N++ N   SK  D L  +++Y ++ P  P+IENNLE +
Sbjct: 178 SFMSAAVNTEVCMRRTNFINNLGGSKYCDPLEGRNVYATLYPRKPAIENNLETV 231


>AE014297-3646|AAF56349.2|  695|Drosophila melanogaster CG7012-PA,
           isoform A protein.
          Length = 695

 Score = 32.7 bits (71), Expect = 0.53
 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = +1

Query: 451 SAIEVAETCQIALQRLNWVAN--DSKENDNLS-KSLYTSVDPAPPSIENNLEAL 603
           S +  A   ++ ++R N++ N   SK  D L  +++Y ++ P  P+IENNLE +
Sbjct: 208 SFMSAAVNTEVCMRRTNFINNLGGSKYCDPLEGRNVYATLYPRKPAIENNLETV 261


>AF145304-1|AAF08385.1|  919|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p97 protein.
          Length = 919

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
 Frame = +1

Query: 361 DPIVRHEAGEALGAIG--DP--NLRELLEKYQHDSAIEVAETCQIALQRLNWVANDSKEN 528
           +P +R     ALG I   +P  N+ + L K+ HDS  EVA     A+  +    N+++  
Sbjct: 694 EPAIRRAVPLALGLISASNPKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLA 753

Query: 529 DNLSK-SLYTSVDPA 570
             L + + Y S DP+
Sbjct: 754 SMLRQLAQYHSKDPS 768


>AF132182-1|AAD34770.1|  919|Drosophila melanogaster unknown
           protein.
          Length = 919

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
 Frame = +1

Query: 361 DPIVRHEAGEALGAIG--DP--NLRELLEKYQHDSAIEVAETCQIALQRLNWVANDSKEN 528
           +P +R     ALG I   +P  N+ + L K+ HDS  EVA     A+  +    N+++  
Sbjct: 694 EPAIRRAVPLALGLISASNPKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLA 753

Query: 529 DNLSK-SLYTSVDPA 570
             L + + Y S DP+
Sbjct: 754 SMLRQLAQYHSKDPS 768


>AE014296-3245|AAF49095.2|  919|Drosophila melanogaster CG7762-PA
           protein.
          Length = 919

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
 Frame = +1

Query: 361 DPIVRHEAGEALGAIG--DP--NLRELLEKYQHDSAIEVAETCQIALQRLNWVANDSKEN 528
           +P +R     ALG I   +P  N+ + L K+ HDS  EVA     A+  +    N+++  
Sbjct: 694 EPAIRRAVPLALGLISASNPKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLA 753

Query: 529 DNLSK-SLYTSVDPA 570
             L + + Y S DP+
Sbjct: 754 SMLRQLAQYHSKDPS 768


>AY052111-1|AAK93535.1|  522|Drosophila melanogaster SD05804p
           protein.
          Length = 522

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
 Frame = -1

Query: 471 LCYFYC*IM--LILFEQLSEIRVSYC-PKGFSGFM----ANYWIMV 355
           +CY  C  M  L L   L +I +S+C P GF G+     A +W+ V
Sbjct: 251 ICYMVCLFMGYLFLLLDLWQISISFCKPAGFLGYFFVMAAFFWLSV 296


>AF109308-1|AAD16981.1|  514|Drosophila melanogaster putative
           G-protein-coupled receptorprotein.
          Length = 514

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
 Frame = -1

Query: 471 LCYFYC*IM--LILFEQLSEIRVSYC-PKGFSGFM----ANYWIMV 355
           +CY  C  M  L L   L +I +S+C P GF G+     A +W+ V
Sbjct: 251 ICYMVCLFMGYLFLLLDLWQISISFCKPAGFLGYFFVMAAFFWLSV 296


>AE014296-2358|AAX52746.1| 1052|Drosophila melanogaster CG32134-PB,
           isoform B protein.
          Length = 1052

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
 Frame = +1

Query: 319 AIPILRSVLEDPNHDPIVRHEAGEALGAIGDPNLRELLEKYQHD-SAIEVAETCQI-ALQ 492
           A PI  +   + N D  V + A EA G +G P  R+ L++ QH  S   V   C +    
Sbjct: 364 ASPIPTASTGEDNDDD-VENPAAEASGGVGPPVFRKELKRLQHSLSGNTVNLACPVYGKA 422

Query: 493 RLNWVANDSKENDNL 537
            + W  +    N  L
Sbjct: 423 NITWTKDKKPLNREL 437


>AE014296-2357|AAF49759.1| 1052|Drosophila melanogaster CG32134-PA,
           isoform A protein.
          Length = 1052

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
 Frame = +1

Query: 319 AIPILRSVLEDPNHDPIVRHEAGEALGAIGDPNLRELLEKYQHD-SAIEVAETCQI-ALQ 492
           A PI  +   + N D  V + A EA G +G P  R+ L++ QH  S   V   C +    
Sbjct: 364 ASPIPTASTGEDNDDD-VENPAAEASGGVGPPVFRKELKRLQHSLSGNTVNLACPVYGKA 422

Query: 493 RLNWVANDSKENDNL 537
            + W  +    N  L
Sbjct: 423 NITWTKDKKPLNREL 437


>AE014296-90|AAF47379.2|  514|Drosophila melanogaster CG6936-PA,
           isoform A protein.
          Length = 514

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
 Frame = -1

Query: 471 LCYFYC*IM--LILFEQLSEIRVSYC-PKGFSGFM----ANYWIMV 355
           +CY  C  M  L L   L +I +S+C P GF G+     A +W+ V
Sbjct: 251 ICYMVCLFMGYLFLLLDLWQISISFCKPAGFLGYFFVMAAFFWLSV 296


>AE014296-89|AAN11440.1|  522|Drosophila melanogaster CG6936-PB,
           isoform B protein.
          Length = 522

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
 Frame = -1

Query: 471 LCYFYC*IM--LILFEQLSEIRVSYC-PKGFSGFM----ANYWIMV 355
           +CY  C  M  L L   L +I +S+C P GF G+     A +W+ V
Sbjct: 251 ICYMVCLFMGYLFLLLDLWQISISFCKPAGFLGYFFVMAAFFWLSV 296


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,415,898
Number of Sequences: 53049
Number of extensions: 629818
Number of successful extensions: 1493
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)