Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6278
         (383 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p pro...    31   0.68 
AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-P...    31   0.68 
AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-P...    31   0.68 
AY118586-1|AAM49955.1|  868|Drosophila melanogaster LD44919p pro...    27   8.4  
AE013599-2412|AAF57909.1|  868|Drosophila melanogaster CG8950-PA...    27   8.4  

>AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p protein.
          Length = 1688

 Score = 30.7 bits (66), Expect = 0.68
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +3

Query: 177  CPTLQTETHYCFTAEIGRVVVPTRA--DSQEVLPPVTCR 287
            C  ++    +CF +  GR+  PTRA  +     PP  CR
Sbjct: 1419 CEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPPPHCR 1457


>AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-PA,
            isoform A protein.
          Length = 1537

 Score = 30.7 bits (66), Expect = 0.68
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +3

Query: 177  CPTLQTETHYCFTAEIGRVVVPTRA--DSQEVLPPVTCR 287
            C  ++    +CF +  GR+  PTRA  +     PP  CR
Sbjct: 1268 CEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPPPHCR 1306


>AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-PB,
            isoform B protein.
          Length = 1688

 Score = 30.7 bits (66), Expect = 0.68
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +3

Query: 177  CPTLQTETHYCFTAEIGRVVVPTRA--DSQEVLPPVTCR 287
            C  ++    +CF +  GR+  PTRA  +     PP  CR
Sbjct: 1419 CEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPPPHCR 1457


>AY118586-1|AAM49955.1|  868|Drosophila melanogaster LD44919p
           protein.
          Length = 868

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = -1

Query: 179 AAVVTILEILELIPQDGWRICV 114
           A++ T L++L L+P D W++C+
Sbjct: 255 ASMFTYLKMLPLMPPDEWKMCL 276


>AE013599-2412|AAF57909.1|  868|Drosophila melanogaster CG8950-PA
           protein.
          Length = 868

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = -1

Query: 179 AAVVTILEILELIPQDGWRICV 114
           A++ T L++L L+P D W++C+
Sbjct: 255 ASMFTYLKMLPLMPPDEWKMCL 276


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,938,079
Number of Sequences: 53049
Number of extensions: 388273
Number of successful extensions: 608
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)