Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6263
         (815 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   139   8e-35
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    28   0.30 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   3.7  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   8.5  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  139 bits (337), Expect = 8e-35
 Identities = 69/179 (38%), Positives = 108/179 (60%), Gaps = 2/179 (1%)
 Frame = +3

Query: 204 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 383
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+  AQT
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQT 220

Query: 384 GSGKTLAYILPAIVHI-NNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 557
           GSGKT A++LP I H+ + +  +  R   P  +++APTRELA QI      F H + ++ 
Sbjct: 221 GSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKV 280

Query: 558 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 734
              +GG   + Q + +  G  +++ATPGRL+DF+++G    +   ++VLDEADRMLDMG
Sbjct: 281 CVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDMG 339


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 28.3 bits (60), Expect = 0.30
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 339 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 464
           P+A + K L   AQ  + ++   I  A+V +  Q  +RR DG
Sbjct: 451 PVASNYKTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +3

Query: 645 LIDFLEKGTTNLQRCTYLVLDEADR 719
           L+ ++E+GT  +Q  + L++DE  +
Sbjct: 133 LLQYIEQGTVRVQDISLLIVDECHK 157


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 156 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 248
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 903,619
Number of Sequences: 2352
Number of extensions: 20508
Number of successful extensions: 43
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)