Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6263
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 250 1e-66
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 198 5e-51
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 192 3e-49
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 188 3e-48
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 161 7e-40
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 156 2e-38
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 156 2e-38
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 156 2e-38
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 152 3e-37
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 141 5e-34
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 123 1e-28
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 123 1e-28
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 123 1e-28
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 120 1e-27
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 120 1e-27
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 118 5e-27
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 118 5e-27
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 118 5e-27
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 110 1e-24
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 110 1e-24
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 107 9e-24
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 107 9e-24
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 106 2e-23
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 104 9e-23
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 104 9e-23
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 102 4e-22
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 100 1e-21
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 97 1e-20
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 97 2e-20
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 97 2e-20
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 96 3e-20
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 92 5e-19
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 88 8e-18
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 88 8e-18
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 83 2e-16
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 83 2e-16
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 79 5e-15
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 78 7e-15
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 72 6e-13
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 72 6e-13
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 72 6e-13
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 69 5e-12
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 68 7e-12
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 68 7e-12
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 68 7e-12
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 54 1e-07
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 52 5e-07
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 48 1e-05
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 41 0.001
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 40 0.002
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 40 0.002
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 39 0.005
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 39 0.005
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 35 0.061
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 33 0.18
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 1.3
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 1.3
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 4.0
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 4.0
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 29 4.0
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 4.0
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 4.0
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 29 5.3
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 9.2
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 250 bits (611), Expect = 1e-66
Identities = 114/217 (52%), Positives = 162/217 (74%)
Frame = +3
Query: 84 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 263
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 264 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 443
P + + + +++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VHI Q
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 444 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 623
+RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++ TC+FGGA K QARDLERGV+I
Sbjct: 196 HRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDI 255
Query: 624 VIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 734
V+ATPGRL+DFL+ GTTN+++C+YLVLDEADRMLDMG
Sbjct: 256 VVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMG 292
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1
Query: 733 GFEPQIRKIIEQIRPDRQTLMWSATW 810
GFEPQI+KII QIRPDRQTLM+SATW
Sbjct: 292 GFEPQIKKIIGQIRPDRQTLMFSATW 317
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 198 bits (482), Expect = 5e-51
Identities = 91/214 (42%), Positives = 136/214 (63%), Gaps = 1/214 (0%)
Frame = +3
Query: 96 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 275
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 276 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 455
+ + ++ Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 456 GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE-RGVEIVIA 632
G+GP+A+++ PTRELA Q+ Q A F + C +GG K EQ+ +L+ G E+V+
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVC 395
Query: 633 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 734
TPGR+ID ++ G TN R T+LV DEADRM DMG
Sbjct: 396 TPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMG 429
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +1
Query: 733 GFEPQIRKIIEQIRPDRQTLMWSATW 810
GFE Q++ I + +RPDRQ LM+SAT+
Sbjct: 429 GFEAQVKSISDHVRPDRQCLMFSATF 454
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 192 bits (467), Expect = 3e-49
Identities = 93/193 (48%), Positives = 127/193 (65%), Gaps = 4/193 (2%)
Frame = +3
Query: 189 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 368
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 369 GVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFG 536
GVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFG 402
Query: 537 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 716
++ V GGA + +Q L GVE+VIATPGRL+D LE L +CTY++LDEAD
Sbjct: 403 KLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEAD 462
Query: 717 RMLDMGI*TTNQK 755
RMLDMG QK
Sbjct: 463 RMLDMGFEPDVQK 475
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 188 bits (459), Expect = 3e-48
Identities = 97/221 (43%), Positives = 136/221 (61%), Gaps = 4/221 (1%)
Frame = +3
Query: 84 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 260
+ + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 261 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 440
+ +K Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 441 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 620
P + GDGPIA++LAPTRELA Q + A F ++ C +GG EQ DL+RG E
Sbjct: 370 PELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAE 429
Query: 621 IVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMG 734
IV+ TPGR+ID L + TNL+R TYLVLDEADRM D G
Sbjct: 430 IVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKG 470
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/26 (61%), Positives = 23/26 (88%)
Frame = +1
Query: 733 GFEPQIRKIIEQIRPDRQTLMWSATW 810
GFEPQI K++ IRPD+QT+++SAT+
Sbjct: 470 GFEPQIMKVVNNIRPDKQTVLFSATF 495
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 161 bits (390), Expect = 7e-40
Identities = 83/180 (46%), Positives = 118/180 (65%), Gaps = 7/180 (3%)
Frame = +3
Query: 216 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSG 392
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV+QTGSG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 393 KTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFGHTSYVR 554
KTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ + + Y +
Sbjct: 134 KTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-K 192
Query: 555 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 734
+ C++GG + EQ GVEIVIATPGRL D G +L TY+VLDEADRMLDMG
Sbjct: 193 SVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMG 252
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +1
Query: 733 GFEPQIRKIIEQIRPDRQTLMWSATW 810
GFE IR+I+ +IRPDR + SATW
Sbjct: 252 GFEVAIRRILFEIRPDRLVALTSATW 277
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 156 bits (379), Expect = 2e-38
Identities = 90/195 (46%), Positives = 116/195 (59%), Gaps = 11/195 (5%)
Frame = +3
Query: 183 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 362
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 363 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQI 512
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 238
Query: 513 QQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 689
+ A F + S ++ ++GG R+Q L G I+IATPGRLID +E+G L C
Sbjct: 239 HKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGC 298
Query: 690 TYLVLDEADRMLDMG 734
YLVLDEADRMLDMG
Sbjct: 299 RYLVLDEADRMLDMG 313
Score = 31.1 bits (67), Expect = 0.99
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Frame = +1
Query: 733 GFEPQIRKIIEQIRPD---RQTLMWSATW 810
GFEPQIRKI+ Q P R T M+SAT+
Sbjct: 313 GFEPQIRKIVGQGMPPKTARTTAMFSATF 341
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 156 bits (379), Expect = 2e-38
Identities = 90/195 (46%), Positives = 116/195 (59%), Gaps = 11/195 (5%)
Frame = +3
Query: 183 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 362
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 363 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQI 512
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 222
Query: 513 QQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 689
+ A F + S ++ ++GG R+Q L G I+IATPGRLID +E+G L C
Sbjct: 223 HKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGC 282
Query: 690 TYLVLDEADRMLDMG 734
YLVLDEADRMLDMG
Sbjct: 283 RYLVLDEADRMLDMG 297
Score = 31.1 bits (67), Expect = 0.99
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Frame = +1
Query: 733 GFEPQIRKIIEQIRPD---RQTLMWSATW 810
GFEPQIRKI+ Q P R T M+SAT+
Sbjct: 297 GFEPQIRKIVGQGMPPKTARTTAMFSATF 325
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 156 bits (379), Expect = 2e-38
Identities = 90/195 (46%), Positives = 116/195 (59%), Gaps = 11/195 (5%)
Frame = +3
Query: 183 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 362
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 363 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQI 512
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 219
Query: 513 QQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 689
+ A F + S ++ ++GG R+Q L G I+IATPGRLID +E+G L C
Sbjct: 220 HKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGC 279
Query: 690 TYLVLDEADRMLDMG 734
YLVLDEADRMLDMG
Sbjct: 280 RYLVLDEADRMLDMG 294
Score = 31.1 bits (67), Expect = 0.99
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Frame = +1
Query: 733 GFEPQIRKIIEQIRPD---RQTLMWSATW 810
GFEPQIRKI+ Q P R T M+SAT+
Sbjct: 294 GFEPQIRKIVGQGMPPKTARTTAMFSATF 322
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 152 bits (368), Expect = 3e-37
Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 11/208 (5%)
Frame = +3
Query: 144 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 320
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 321 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPT 491
IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 492 RELAQQIQQVAADF-------GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 650
RELA+QI + + G C+ GG P EQA+D+ G+ IV+ATPGRL
Sbjct: 276 RELARQIFDLIIEMFDALGKAGLPEMRAGLCI-GGVPIGEQAKDVRDGIHIVVATPGRLS 334
Query: 651 DFLEKGTTNLQRCTYLVLDEADRMLDMG 734
D L K NL+ C YLVLDEADRMLDMG
Sbjct: 335 DMLTKKIINLEVCRYLVLDEADRMLDMG 362
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 733 GFEPQIRKIIEQIRPDRQTLMWSAT 807
GFE +I+ I + RQTL++SAT
Sbjct: 362 GFEDEIKSIFYFFKAQRQTLLFSAT 386
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 141 bits (342), Expect = 5e-34
Identities = 74/188 (39%), Positives = 110/188 (58%), Gaps = 12/188 (6%)
Frame = +3
Query: 207 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 386
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 387 SGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVAADF 533
SGKT A+++P + I P R+ P ALVL+PTREL+ QI + F
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 273
Query: 534 GHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 710
+ + + + ++GG ++Q L G I+IATPGRLID +++G ++ C YLVLDE
Sbjct: 274 AYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDE 333
Query: 711 ADRMLDMG 734
ADRMLDMG
Sbjct: 334 ADRMLDMG 341
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
Frame = +1
Query: 733 GFEPQIRKIIE----QIRPDRQTLMWSATW 810
GFEPQIR+I+E + +R T M+SAT+
Sbjct: 341 GFEPQIRQIVECNRMPSKEERITAMFSATF 370
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 123 bits (297), Expect = 1e-28
Identities = 66/174 (37%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Frame = +3
Query: 237 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 416
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 417 AIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 584
+ + + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 585 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGI*T 743
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MG T
Sbjct: 459 GYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGT 512
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 123 bits (297), Expect = 1e-28
Identities = 66/174 (37%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Frame = +3
Query: 237 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 416
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 417 AIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 584
+ + + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 585 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGI*T 743
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MG T
Sbjct: 459 GYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGT 512
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 123 bits (297), Expect = 1e-28
Identities = 66/174 (37%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Frame = +3
Query: 237 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 416
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 417 AIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 584
+ + + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 585 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGI*T 743
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MG T
Sbjct: 459 GYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGT 512
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 120 bits (289), Expect = 1e-27
Identities = 71/193 (36%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Frame = +3
Query: 237 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 416
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 417 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 584
+ + + + G +G P ++L PTRELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
Query: 585 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGI-----*TT 746
+ +G I++ T GR+ F E G L +C YLVLDEADRM+D MG
Sbjct: 416 GYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQII 475
Query: 747 NQKNH*ANTPRQT 785
N KN N RQT
Sbjct: 476 NYKNMPKNDKRQT 488
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 120 bits (289), Expect = 1e-27
Identities = 71/193 (36%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Frame = +3
Query: 237 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 416
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 417 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 584
+ + + + G +G P ++L PTRELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
Query: 585 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGI-----*TT 746
+ +G I++ T GR+ F E G L +C YLVLDEADRM+D MG
Sbjct: 416 GYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQII 475
Query: 747 NQKNH*ANTPRQT 785
N KN N RQT
Sbjct: 476 NYKNMPKNDKRQT 488
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 118 bits (284), Expect = 5e-27
Identities = 63/170 (37%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
Frame = +3
Query: 249 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 428
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 429 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 596
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 597 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGI*T 743
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MG T
Sbjct: 674 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGT 723
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 118 bits (284), Expect = 5e-27
Identities = 63/170 (37%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
Frame = +3
Query: 249 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 428
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 429 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 596
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 597 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGI*T 743
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MG T
Sbjct: 674 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGT 723
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 118 bits (284), Expect = 5e-27
Identities = 63/170 (37%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
Frame = +3
Query: 249 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 428
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 429 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 596
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 597 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGI*T 743
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MG T
Sbjct: 674 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGT 723
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 110 bits (264), Expect = 1e-24
Identities = 57/168 (33%), Positives = 94/168 (55%)
Frame = +3
Query: 231 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 410
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 411 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 590
+P + + R G AL+++PTRELA Q +V + G + +R C+ GG E
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEE 135
Query: 591 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 734
Q + +I++ATPGRL+ + + L Y+V DEADR+ +MG
Sbjct: 136 QFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMG 183
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 733 GFEPQIRKIIEQIRPDRQTLMWSAT 807
GF+ Q+ + +++I RQTL++SAT
Sbjct: 183 GFQDQLTETLKRIPESRQTLLFSAT 207
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 110 bits (264), Expect = 1e-24
Identities = 57/168 (33%), Positives = 94/168 (55%)
Frame = +3
Query: 231 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 410
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 411 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 590
+P + + R G AL+++PTRELA Q +V + G + +R C+ GG E
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEE 135
Query: 591 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 734
Q + +I++ATPGRL+ + + L Y+V DEADR+ +MG
Sbjct: 136 QFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMG 183
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 733 GFEPQIRKIIEQIRPDRQTLMWSAT 807
GF+ Q+ + +++I RQTL++SAT
Sbjct: 183 GFQDQLTETLKRIPESRQTLLFSAT 207
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 107 bits (257), Expect = 9e-24
Identities = 56/165 (33%), Positives = 93/165 (56%)
Frame = +3
Query: 240 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 419
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 420 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 599
+ I+++ P + ALV+APTRELAQQIQ+V + G V GG R+ R
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQR 142
Query: 600 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 734
LE G+ +V+ TPGR+ D + + + R VLDEAD ML G
Sbjct: 143 KLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRG 187
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 107 bits (257), Expect = 9e-24
Identities = 56/165 (33%), Positives = 93/165 (56%)
Frame = +3
Query: 240 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 419
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 420 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 599
+ I+++ P + ALV+APTRELAQQIQ+V + G V GG R+ R
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQR 142
Query: 600 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 734
LE G+ +V+ TPGR+ D + + + R VLDEAD ML G
Sbjct: 143 KLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRG 187
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 106 bits (255), Expect = 2e-23
Identities = 55/147 (37%), Positives = 87/147 (59%)
Frame = +3
Query: 285 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 464
G+ G+++P+PIQ +A++G++++ A+ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 465 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 644
A+V+ PTRELA Q Q+ + ++ GG R+ L V +VIATPGR
Sbjct: 114 --AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGR 171
Query: 645 LIDFLEKGTTNLQRCTYLVLDEADRML 725
++D +EKG ++ C LVLDEAD++L
Sbjct: 172 ILDLMEKGVAKMEHCKTLVLDEADKLL 198
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 104 bits (249), Expect = 9e-23
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 4/164 (2%)
Frame = +3
Query: 249 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 428
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 429 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 608
++ P G AL+L PTRELA QI + G ++ + + GG QAR+L
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELS 205
Query: 609 RGVEIVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLD 728
+V+ATPGRL D +E + ++ + VLDEADRML+
Sbjct: 206 ERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLE 249
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 104 bits (249), Expect = 9e-23
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 4/164 (2%)
Frame = +3
Query: 249 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 428
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 429 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 608
++ P G AL+L PTRELA QI + G ++ + + GG QAR+L
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELS 205
Query: 609 RGVEIVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLD 728
+V+ATPGRL D +E + ++ + VLDEADRML+
Sbjct: 206 ERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLE 249
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 102 bits (244), Expect = 4e-22
Identities = 62/163 (38%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Frame = +3
Query: 249 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 428
F E + + +G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 429 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 608
+ + P LVL PTRELA QI Q G + + GG QA L
Sbjct: 106 LLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALA 160
Query: 609 RGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEADRMLDM 731
R I++ATPGRL+D LE KG NL+ +L++DEADR+L+M
Sbjct: 161 RRPHIIVATPGRLVDHLENTKG-FNLKALKFLIMDEADRILNM 202
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 100 bits (239), Expect = 1e-21
Identities = 56/152 (36%), Positives = 94/152 (61%), Gaps = 1/152 (0%)
Frame = +3
Query: 282 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 461
+ V+ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 462 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 641
G ++++PTREL+ Q V ++ S + V GG+ + + L +GV I++ATPG
Sbjct: 140 GTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATPG 199
Query: 642 RLIDFLEKGTTNLQR-CTYLVLDEADRMLDMG 734
RL+D L+ L R L++DEADR+LD+G
Sbjct: 200 RLLDHLQNTDNFLVRNMKCLIIDEADRILDIG 231
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 97.5 bits (232), Expect = 1e-20
Identities = 54/167 (32%), Positives = 89/167 (53%)
Frame = +3
Query: 234 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYIL 413
N I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 414 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 593
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ GG E
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGED 137
Query: 594 ARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 734
R L+ G +V TPGR+ D + + + LVLDEAD ML+ G
Sbjct: 138 IRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKG 184
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 96.7 bits (230), Expect = 2e-20
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Frame = +3
Query: 186 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 365
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 366 VGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 530
V A TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 531 FGHTSYVRNTCVFGGAPKREQARDLE--RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 704
+ + ++ FGG + + L + I++AT GRL DF+ G +L + Y+VL
Sbjct: 837 LTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVL 896
Query: 705 DEADRMLD 728
DEADRM+D
Sbjct: 897 DEADRMVD 904
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 96.7 bits (230), Expect = 2e-20
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Frame = +3
Query: 186 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 365
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 366 VGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 530
V A TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 531 FGHTSYVRNTCVFGGAPKREQARDLE--RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 704
+ + ++ FGG + + L + I++AT GRL DF+ G +L + Y+VL
Sbjct: 837 LTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVL 896
Query: 705 DEADRMLD 728
DEADRM+D
Sbjct: 897 DEADRMVD 904
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 95.9 bits (228), Expect = 3e-20
Identities = 53/165 (32%), Positives = 88/165 (53%)
Frame = +3
Query: 240 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 419
I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 420 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 599
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ GG E R
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIR 139
Query: 600 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 734
L+ G +V TPGR+ D + + + LVLDEAD ML+ G
Sbjct: 140 KLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKG 184
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 93.1 bits (221), Expect = 2e-19
Identities = 52/155 (33%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Frame = +3
Query: 276 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQ 440
+ + +K + Y IQ P + G +++G A+T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 441 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 620
R+ DGP+AL+LAPTRELA QI + + + + +G + + ++ G +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCD 511
Query: 621 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 725
I+I T GR++DF K +L +LV DEADR+L
Sbjct: 512 ILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLL 546
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 91.9 bits (218), Expect = 5e-19
Identities = 51/137 (37%), Positives = 73/137 (53%)
Frame = +3
Query: 249 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 428
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 429 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 608
+ +P + LVL PTRELA Q+ QV + GG + Q L
Sbjct: 210 MIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALR 267
Query: 609 RGVEIVIATPGRLIDFL 659
G ++V+ATPGRLID L
Sbjct: 268 SGPDVVVATPGRLIDHL 284
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 87.8 bits (208), Expect = 8e-18
Identities = 57/169 (33%), Positives = 95/169 (56%), Gaps = 13/169 (7%)
Frame = +3
Query: 267 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI---- 431
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 432 --NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL 605
+ + GP AL++APTREL QI + T+ + T + GG + +Q R +
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERII 282
Query: 606 -ERGVEIVIATPGRLIDFLEKGTT-----NLQRCTYLVLDEADRMLDMG 734
++ +IV+ATPGRL +++ T + LV+DE DRM++ G
Sbjct: 283 SQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEG 331
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 87.8 bits (208), Expect = 8e-18
Identities = 56/152 (36%), Positives = 82/152 (53%), Gaps = 1/152 (0%)
Frame = +3
Query: 282 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 461
+G+K Y +PT IQ +++G ++VG A+TGSGKTLA ++P ++ +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDY 147
Query: 462 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 641
G AL+++PTRELA Q G V GG+ + R+ G+ I++ TPG
Sbjct: 148 GLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFE-RNRISGINIIVCTPG 206
Query: 642 RLIDFL-EKGTTNLQRCTYLVLDEADRMLDMG 734
RL+ + E + LVLDEADRMLDMG
Sbjct: 207 RLLQHMDENAQMSCDSLQVLVLDEADRMLDMG 238
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 733 GFEPQIRKIIEQIRPDRQTLMWSAT 807
GF Q+ II + +RQTL++SAT
Sbjct: 238 GFSKQLNSIINNLPAERQTLLFSAT 262
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 83.0 bits (196), Expect = 2e-16
Identities = 45/161 (27%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Frame = +3
Query: 249 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 428
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 429 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 608
+++ R +++ PTRE++ QI++ T R + GG+ + DL+
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLK 137
Query: 609 RG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 728
+ +IVI TPGR+ ++ G N+ + VLDEAD+++D
Sbjct: 138 QTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMD 178
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 83.0 bits (196), Expect = 2e-16
Identities = 45/161 (27%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Frame = +3
Query: 249 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 428
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 429 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 608
+++ R +++ PTRE++ QI++ T R + GG+ + DL+
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLK 137
Query: 609 RG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 728
+ +IVI TPGR+ ++ G N+ + VLDEAD+++D
Sbjct: 138 QTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMD 178
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 78.6 bits (185), Expect = 5e-15
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Frame = +3
Query: 249 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 428
F + + + + + +G+++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 429 INNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL 605
+ + G GP A+++APT+EL QI ++ + E + L
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWL 210
Query: 606 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 734
E +V+ TPG+L+ +YLV+DEAD +L G
Sbjct: 211 EDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFG 253
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 78.2 bits (184), Expect = 7e-15
Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 13/157 (8%)
Frame = +3
Query: 303 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGD 461
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 462 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL-ERGVEIVIATP 638
GP AL++APTREL QI + T+ + T + GG + +Q R + ++ +IV+ATP
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATP 127
Query: 639 GRLIDFLEKGTT-----NLQRCTYLVLDEADRMLDMG 734
GRL +++ T + LV+DE DRM++ G
Sbjct: 128 GRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEG 164
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 77.4 bits (182), Expect = 1e-14
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Frame = +3
Query: 156 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 335
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 336 WPIAMSGKNLVGVAQTGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTREL 500
P +N++ A TGSGKTLA+ LP I+ + + + +A+VL PTREL
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTREL 216
Query: 501 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 680
A Q +F Y NT + E+ D++ +I+++TP R++ L+K T+
Sbjct: 217 A---AQTYTEF--LKYCANTSISAANFSGEET-DIQH-ADILVSTPNRIVFHLDKIDTSS 269
Query: 681 QRCTYLVLDEADRMLDM 731
R +LV+DE+DR+ ++
Sbjct: 270 LR--WLVVDESDRLFEV 284
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 71.7 bits (168), Expect = 6e-13
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Frame = +3
Query: 276 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 455
+ + + G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+
Sbjct: 52 ILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV-- 106
Query: 456 GDGPIALV-LAPTRELAQQIQQVAADFG-HTSYVRNTCVFGG-APKREQARDLERGVEIV 626
DG +++V + TRELA QI + F + V+ FGG A K+++ R IV
Sbjct: 107 -DGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 165
Query: 627 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 725
+ TPGR++ G L + Y VLDE D+M+
Sbjct: 166 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 198
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 71.7 bits (168), Expect = 6e-13
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Frame = +3
Query: 276 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 455
+ + + G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+
Sbjct: 52 ILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV-- 106
Query: 456 GDGPIALV-LAPTRELAQQIQQVAADFG-HTSYVRNTCVFGG-APKREQARDLERGVEIV 626
DG +++V + TRELA QI + F + V+ FGG A K+++ R IV
Sbjct: 107 -DGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 165
Query: 627 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 725
+ TPGR++ G L + Y VLDE D+M+
Sbjct: 166 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 198
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 71.7 bits (168), Expect = 6e-13
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Frame = +3
Query: 276 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 455
+ + + G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+
Sbjct: 51 ILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV-- 105
Query: 456 GDGPIALV-LAPTRELAQQIQQVAADFG-HTSYVRNTCVFGG-APKREQARDLERGVEIV 626
DG +++V + TRELA QI + F + V+ FGG A K+++ R IV
Sbjct: 106 -DGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 164
Query: 627 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 725
+ TPGR++ G L + Y VLDE D+M+
Sbjct: 165 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 197
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 68.5 bits (160), Expect = 5e-12
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 5/165 (3%)
Frame = +3
Query: 240 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 419
++ F E P+ ++ V YK T +Q ++ ++V + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 420 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 599
+ I N G AL+L+P+REL QI V F + V GG + +
Sbjct: 68 MRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIK 125
Query: 600 DLE-RGVEIVIATPGRLIDFLEKGTTNLQR----CTYLVLDEADR 719
+ + V I++ATPGRL ++ T + R LV+DEADR
Sbjct: 126 MFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADR 170
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 68.1 bits (159), Expect = 7e-12
Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Frame = +3
Query: 240 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 413
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 414 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKR 587
+ I+ P + LAPT ELA+QI +V G + + + GG
Sbjct: 268 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA 322
Query: 588 EQARDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 725
+ R L +IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 323 MRGRKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 367
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 68.1 bits (159), Expect = 7e-12
Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Frame = +3
Query: 240 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 413
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 414 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKR 587
+ I+ P + LAPT ELA+QI +V G + + + GG
Sbjct: 293 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA 347
Query: 588 EQARDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 725
+ R L +IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 348 MRGRKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 392
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 68.1 bits (159), Expect = 7e-12
Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Frame = +3
Query: 240 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 413
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 414 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKR 587
+ I+ P + LAPT ELA+QI +V G + + + GG
Sbjct: 677 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA 731
Query: 588 EQARDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 725
+ R L +IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 732 MRGRKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 776
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 56.0 bits (129), Expect = 3e-08
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Frame = +3
Query: 339 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 518
P + +++ A TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVD 206
Query: 519 VAADFGHTSYVRNTCVFGGAPKRE-QARDLERG-VEIVIATPGRLIDFLEK---GTTNLQ 683
+ S V GA E +AR L +++ATP RL+ L +L
Sbjct: 207 EFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDLS 266
Query: 684 RCTYLVLDEADRM 722
+ +L++DEADRM
Sbjct: 267 KLRFLIVDEADRM 279
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 465 PIALVLAPTRELAQQIQQVAADFGH---TSYVRNTCVFGGAPKREQARDLERGVEIVIAT 635
P+ ++L PTREL QQ Q F + +R + G + R LE G +IV+ T
Sbjct: 282 PLCVILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLETGCDIVVGT 341
Query: 636 PGRLIDFLEKGTTNLQRCTYLVLDEADRML 725
P R+ D + G + ++V+DE D+ L
Sbjct: 342 PSRVFDLIHTGKLATKNLQFVVIDEIDQFL 371
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 249 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 416
FEE + + ++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 52.0 bits (119), Expect = 5e-07
Identities = 39/151 (25%), Positives = 71/151 (47%)
Frame = +3
Query: 282 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 461
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+ + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 462 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 641
++LAP R +AQ+ + G V TC+ + + ++ +++ TP
Sbjct: 67 ---VILLAPQRGMAQRAHEQLKSLGRNLNVNATCL-----GFDTTAENDKISHVLMGTPK 118
Query: 642 RLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 734
DFL ++ R VLDEAD ML G
Sbjct: 119 ---DFLSNIPSDTSRIKMFVLDEADEMLSKG 146
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Frame = +3
Query: 414 PAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 584
P + ++ +P + DG P A+++APT+EL QI ++ +
Sbjct: 77 PQVDEMDFEPEHKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINE 136
Query: 585 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 734
E + LE +V+ TPG+L+ +YLV+DEAD +L G
Sbjct: 137 EENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFG 186
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 40.7 bits (91), Expect = 0.001
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Frame = +3
Query: 321 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRG--DGPIALVLAP 488
+Q + G+ LV A TG GKT A+++PAI N Q P L++A
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 489 TRELAQQIQQVAADFGHTSYVRN-TCVFGGAPKREQARD-------LERG-VEIVIATPG 641
T L Q+ F + C+ P R+ D +G +I T G
Sbjct: 79 TSALVDQL------FNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIG 132
Query: 642 RLIDFLEKGTTNLQRCTYLVLDEADRMLD 728
+L +E G L ++LDEAD+M+D
Sbjct: 133 KLKATIECGDVCLDNLKTIILDEADKMID 161
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 39.9 bits (89), Expect = 0.002
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 13/149 (8%)
Frame = +3
Query: 321 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI-VHINNQPP---IRRGDGPIALVLAP 488
+Q + G+ LV A TG GKT A+++PAI + N+ P L++A
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNCFEYTKPSPSILIMAS 178
Query: 489 TRELAQQIQQVAADFGHTSYVRN-TCVFGGAPKREQARD-------LERG-VEIVIATPG 641
T L Q+ F + C+ P R+ D +G +I T G
Sbjct: 179 TSALVDQL------FNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIG 232
Query: 642 RLIDFLEKGTTNLQRCTYLVLDEADRMLD 728
+L +E G L ++LDEAD+M+D
Sbjct: 233 KLKATIECGDVCLDNLKTIILDEADKMID 261
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 39.9 bits (89), Expect = 0.002
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Frame = +3
Query: 357 KNLVGVAQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 524
+ L+ A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQLFNRC 189
Query: 525 ------ADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 686
D +R+ + + +D +I T G+L +E T L
Sbjct: 190 EVLLGLIDMEDIIPIRDIKIEKLVASYQFTKD---QCDIAFCTMGKLKASIEDKTILLDN 246
Query: 687 CTYLVLDEADRMLDM 731
++LDE+D+M+D+
Sbjct: 247 LKMMILDESDKMIDI 261
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/113 (24%), Positives = 55/113 (48%)
Frame = +3
Query: 342 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 521
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 522 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 680
A+ + +V +T + G+ R++ + ++++ATP +++ + +L
Sbjct: 359 ASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 410
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/113 (24%), Positives = 55/113 (48%)
Frame = +3
Query: 342 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 521
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 522 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 680
A+ + +V +T + G+ R++ + ++++ATP +++ + +L
Sbjct: 359 ASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 410
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 35.1 bits (77), Expect = 0.061
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 345 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 524
A+ GKN V VA TGSGKT I A+ HI + +G ++L P L Q +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER--TSQGKPSRVVLLVPKIPLVGQQKDRF 439
Query: 525 ADFGHTSYVRNTCVFGGAPKREQA---RDLERGVEIVIATPGRLIDFLEKGTTN 677
+ + Y N F G+ RD + + TP LI+ L+ N
Sbjct: 440 LKYCNGMYEVNG--FHGSESSVSGTGRRDEVIATHVSVMTPQILINMLQSVRQN 491
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 33.5 bits (73), Expect = 0.18
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +3
Query: 300 GYKEPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 476
G+K PIQ Q + + S +N++ A GSGKT L + H N P + A+
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEAK------AV 1371
Query: 477 VLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 644
+ P ++A +V AD+ + +T V + + +RG +++I+TP R
Sbjct: 1372 YITPMEDMA---TKVYADWKRRLEPAIGHTIVLLTGEQTMDLKLAQRG-QLIISTPER 1425
Score = 28.3 bits (60), Expect = 7.0
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Frame = +3
Query: 300 GYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 476
GYK IQ++ A+ K +L+ A TG+GKT +L + I N DG + L
Sbjct: 471 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNH---LAEDGSVKL 527
Query: 477 ------VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 638
+AP + L +Q++ F V + +++ ++++ TP
Sbjct: 528 DEFKIVYIAPMKSL---VQEMVGSFSKRLAPFGITVGEMTGDAQMSKEQFMATQVIVCTP 584
Query: 639 GRLIDFLEKGTTNL--QRCTYLVLDEADRMLD 728
+ KG Q L++DE + D
Sbjct: 585 EKYDVVTRKGGERAYNQMVRLLIIDEIHLLHD 616
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 318 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 425
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 318 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 425
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 381 TGSGKTLAYILPAIVH 428
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 514 SKLLQILDTHLMFVTRVCLVVLLKESK 594
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 29.1 bits (62), Expect = 4.0
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 357 KNLVGVAQTGSGKT-LAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 533
KN + TGSGKT +A +L + P+ +G V+ + QQ +
Sbjct: 27 KNTIVQLGTGSGKTFIAVLLLKEYGVQLFAPLDQGGKRAFFVVEKVNLVEQQAIHIEV-- 84
Query: 534 GHTSY----VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 701
HTS+ V G +EQ + +V+ T L+D + ++ L+
Sbjct: 85 -HTSFKVGQVHGQTSSGLWDSKEQCDQFMKRHHVVVITAQCLLDLIRHAYLKIEDMCVLI 143
Query: 702 LDEADRML 725
DE L
Sbjct: 144 FDECHHAL 151
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 362 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 183
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 182 D 180
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 362 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 183
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 182 D 180
+
Sbjct: 86 N 86
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 28.7 bits (61), Expect = 5.3
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +3
Query: 300 GYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 476
GYK IQ++ A+ K +L+ A TG+GKT +L + I N DG + L
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNH---LAEDGSVKL 329
Query: 477 ------VLAPTRELAQQI 512
+APT+ L Q++
Sbjct: 330 EEFKIVYIAPTKSLVQEM 347
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 144 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 302
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 144 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 302
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,852,770
Number of Sequences: 27780
Number of extensions: 456697
Number of successful extensions: 1429
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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