Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6261
(799 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55364-5|AAQ23124.1| 368|Caenorhabditis elegans Prion-like-(q/n... 41 0.001
U55364-4|AAA97972.1| 382|Caenorhabditis elegans Prion-like-(q/n... 41 0.001
Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 34 0.14
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 33 0.18
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 32 0.41
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 32 0.41
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 32 0.41
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 31 0.72
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 31 0.72
AF003130-18|AAO38640.1| 441|Caenorhabditis elegans Prion-like-(... 31 0.96
AF003130-17|AAB54127.1| 470|Caenorhabditis elegans Prion-like-(... 31 0.96
AF003130-16|AAK68879.1| 457|Caenorhabditis elegans Prion-like-(... 31 0.96
AF003130-15|AAM45365.1| 465|Caenorhabditis elegans Prion-like-(... 31 0.96
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical ... 29 2.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 2.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 2.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 2.9
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 29 3.9
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 29 3.9
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 29 3.9
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 29 3.9
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 29 3.9
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 29 3.9
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 29 3.9
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 29 5.1
U53332-11|AAK31531.1| 668|Caenorhabditis elegans Protein tyrosi... 29 5.1
L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF015882-1|AAC21678.1| 668|Caenorhabditis elegans protein tyros... 29 5.1
Z92849-5|CAB07430.1| 163|Caenorhabditis elegans Hypothetical pr... 28 6.7
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 28 6.7
L13200-7|AAA28189.1| 206|Caenorhabditis elegans Prion-like-(q/n... 28 6.7
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 28 6.7
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 28 8.9
Z49128-2|CAA88959.1| 848|Caenorhabditis elegans Hypothetical pr... 28 8.9
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 8.9
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 8.9
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 8.9
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 8.9
>U55364-5|AAQ23124.1| 368|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform b protein.
Length = 368
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +3
Query: 597 NNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQFSGQNTQFIGS 734
N QNQ Q GQ ++ Q Q N Q YQ G + NTQ +GS
Sbjct: 294 NGQNQFQQSNGQNQNSQYQQTSNQQMNNQQYQTGDYQQTNTQSMGS 339
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Frame = +3
Query: 597 NNQNQLQVQTGQ---YG----HNTGQNYQTSQFNGQSYQPGQFSGQNTQFIGSGSGLGSA 755
N QN Q Q GQ YG ++ GQN Q Y +S QN+Q S + GS+
Sbjct: 91 NQQNSNQYQQGQQNNYGTQAQYDAGQNQMGQSGQVQGYSNNGYSNQNSQMSQSQASSGSS 150
Query: 756 QVPFQGY 776
V Y
Sbjct: 151 SVSLMDY 157
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 11/52 (21%)
Frame = +3
Query: 600 NQNQLQVQTGQYGHNTGQNYQTS-----------QFNGQSYQPGQFSGQNTQ 722
NQNQ T QY N QN Q S Q N YQ GQ + TQ
Sbjct: 58 NQNQQYGSTAQYNQNQMQNQQNSNQYSTTSNMNNQQNSNQYQQGQQNNYGTQ 109
>U55364-4|AAA97972.1| 382|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform a protein.
Length = 382
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +3
Query: 597 NNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQFSGQNTQFIGS 734
N QNQ Q GQ ++ Q Q N Q YQ G + NTQ +GS
Sbjct: 308 NGQNQFQQSNGQNQNSQYQQTSNQQMNNQQYQTGDYQQTNTQSMGS 353
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Frame = +3
Query: 597 NNQNQLQVQTGQ---YG----HNTGQNYQTSQFNGQSYQPGQFSGQNTQFIGSGSGLGSA 755
N QN Q Q GQ YG ++ GQN Q Y +S QN+Q S + GS+
Sbjct: 105 NQQNSNQYQQGQQNNYGTQAQYDAGQNQMGQSGQVQGYSNNGYSNQNSQMSQSQASSGSS 164
Query: 756 QVPFQGY 776
V Y
Sbjct: 165 SVSLMDY 171
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 11/52 (21%)
Frame = +3
Query: 600 NQNQLQVQTGQYGHNTGQNYQTS-----------QFNGQSYQPGQFSGQNTQ 722
NQNQ T QY N QN Q S Q N YQ GQ + TQ
Sbjct: 72 NQNQQYGSTAQYNQNQMQNQQNSNQYSTTSNMNNQQNSNQYQQGQQNNYGTQ 123
>Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical
protein K01A6.4 protein.
Length = 284
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/61 (42%), Positives = 29/61 (47%)
Frame = +3
Query: 594 GNNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQFSGQNTQFIGSGSGLGSAQVPFQG 773
GN QNQ Q Q+GQ TGQ Q G G F GQ SG G GS+Q F G
Sbjct: 27 GNEQNQ-QSQSGQ--RQTGQGQQVGSQQGFGGMQGGFGGQ------SGFGGGSSQGGFGG 77
Query: 774 Y 776
+
Sbjct: 78 F 78
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical protein
F20C5.2b protein.
Length = 1130
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 136 TKTSQRKPIKLNR--KRKCKEISSTQHGLHPPTKPTRVSRNRSSKAKIS 276
T ++RK I + R R K+ + LHPPT P+++S++ SS + ++
Sbjct: 1050 TPRTRRKLISVRRLKDRNRKKFKCSMKRLHPPTSPSKISKSASSSSDLT 1098
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 407 IRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRA 562
+RE P AE P S SK V ++ +P P+A+PE S C RA
Sbjct: 555 VREISPVAENLEPTSESKRVKSKKQKKQKPSENPIAKPEEKQSNACPKCFRA 606
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 585 GLDSEIGPALGHS*VGSLHTGSGLATGPDFGSGN 484
G ++ +GP G+ G GSG A G FGSGN
Sbjct: 59 GGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGN 92
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 585 GLDSEIGPALGHS*VGSLHTGSGLATGPDFGSGN 484
G ++ +GP G+ G GSG A G FGSGN
Sbjct: 59 GGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGN 92
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 585 GLDSEIGPALGHS*VGSLHTGSGLATGPDFGSGN 484
G ++ +GP G+ G GSG A G FGSGN
Sbjct: 59 GGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGN 92
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 31.5 bits (68), Expect = 0.72
Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Frame = +1
Query: 172 RKRKCKEISSTQHGLHPPTKPTRVSRNRSSKAKISITIMLIILLCPLERTQLQLVQQ--- 342
R+R + S + +PP++ T ++ + SK K S+T ++++LL + +V++
Sbjct: 89 RRRTTPDSSMDCYEENPPSQKTSINYSWISK-KSSMTSLMLLLLFAFVQPCASIVEKRCG 147
Query: 343 -FQTRAAMVGLKPKDSFKTSPNNQGINSKRRTKITTVR--LKISF-KGNRTISRTKIRSS 510
R +KP+ S PN + + +R T V L ISF ++T ++ ++ S
Sbjct: 148 PIDIRNRPWDIKPQWSKLGDPNEKDLAGQRMVNCTVVEGSLTISFVLKHKTKAQEEMHRS 207
Query: 511 CKARTSME 534
+ R S +
Sbjct: 208 LQPRYSQD 215
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 31.5 bits (68), Expect = 0.72
Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Frame = +1
Query: 172 RKRKCKEISSTQHGLHPPTKPTRVSRNRSSKAKISITIMLIILLCPLERTQLQLVQQ--- 342
R+R + S + +PP++ T ++ + SK K S+T ++++LL + +V++
Sbjct: 86 RRRTTPDSSMDCYEENPPSQKTSINYSWISK-KSSMTSLMLLLLFAFVQPCASIVEKRCG 144
Query: 343 -FQTRAAMVGLKPKDSFKTSPNNQGINSKRRTKITTVR--LKISF-KGNRTISRTKIRSS 510
R +KP+ S PN + + +R T V L ISF ++T ++ ++ S
Sbjct: 145 PIDIRNRPWDIKPQWSKLGDPNEKDLAGQRMVNCTVVEGSLTISFVLKHKTKAQEEMHRS 204
Query: 511 CKARTSME 534
+ R S +
Sbjct: 205 LQPRYSQD 212
>AF003130-18|AAO38640.1| 441|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform d protein.
Length = 441
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +3
Query: 594 GNNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQFSGQNTQFIGSGSGLGSAQV 761
GN QNQ Q Q N QN Q Q + Q YQ QN QF+ L Q+
Sbjct: 4 GNGQNQQGNQQYQQCQNNYQNQQNHQNSNQGYQ----EPQNEQFVSRTMILAKGQM 55
>AF003130-17|AAB54127.1| 470|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform a protein.
Length = 470
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +3
Query: 594 GNNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQFSGQNTQFIGSGSGLGSAQV 761
GN QNQ Q Q N QN Q Q + Q YQ QN QF+ L Q+
Sbjct: 33 GNGQNQQGNQQYQQCQNNYQNQQNHQNSNQGYQ----EPQNEQFVSRTMILAKGQM 84
>AF003130-16|AAK68879.1| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform b protein.
Length = 457
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +3
Query: 594 GNNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQFSGQNTQFIGSGSGLGSAQV 761
GN QNQ Q Q N QN Q Q + Q YQ QN QF+ L Q+
Sbjct: 20 GNGQNQQGNQQYQQCQNNYQNQQNHQNSNQGYQ----EPQNEQFVSRTMILAKGQM 71
>AF003130-15|AAM45365.1| 465|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform c protein.
Length = 465
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +3
Query: 594 GNNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQFSGQNTQFIGSGSGLGSAQV 761
GN QNQ Q Q N QN Q Q + Q YQ QN QF+ L Q+
Sbjct: 28 GNGQNQQGNQQYQQCQNNYQNQQNHQNSNQGYQ----EPQNEQFVSRTMILAKGQM 79
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 413 ESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT 544
+S+ +PK P+ SK+ ++ + P+PK P P+P +EP+
Sbjct: 14 DSLGGPKPKDPKLASKAPAKKPSETPKPKEVPKELPKP--AEPS 55
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 597 NNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQFSGQ 713
+ QN Q GQY +YQ S + +YQPGQ Q
Sbjct: 2726 SQQNPYMNQQGQYSQQPPPSYQQSSY-PNNYQPGQQGNQ 2763
>AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical
protein K06A5.4 protein.
Length = 877
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/88 (26%), Positives = 41/88 (46%)
Frame = +1
Query: 316 RTQLQLVQQFQTRAAMVGLKPKDSFKTSPNNQGINSKRRTKITTVRLKISFKGNRTISRT 495
RT + ++ TRA+++ +DS + NN NS R + ++ +FK + +S
Sbjct: 749 RTPIVTKKRGGTRASIMPKPVEDSPMSRGNNSTFNSPRLEQTKAKDIETNFKYVQHLSMM 808
Query: 496 KIRSSCKARTSME*TNLTMSKGRANFRI 579
+ R S + + S N T +G N I
Sbjct: 809 QARPSSRLKKSSSMNNSTY-RGNKNTSI 835
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 443 PRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPISESSP 586
PR S+ S + E+ P+ P P S PT PR P + S P
Sbjct: 390 PRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPP 437
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 443 PRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPISESSP 586
PR S+ S + E+ P+ P P S PT PR P + S P
Sbjct: 411 PRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPP 458
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 443 PRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPISESSP 586
PR S+ S + E+ P+ P P S PT PR P + S P
Sbjct: 396 PRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPP 443
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 29.1 bits (62), Expect = 3.9
Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 4/163 (2%)
Frame = +1
Query: 178 RKCKEISSTQHGLHPPTKPTRVSR-NRSSKAKISITIMLIILLCPLERTQLQLVQQFQTR 354
+K K++ + + T P R+ NR A +T+ + PL + + +QF
Sbjct: 651 KKVKQLKAREQDTIKTTLPMRLRIFNRFPTAPTMVTMKKVSSEFPLPKIRDSFTRQFADE 710
Query: 355 AAMVG--LKPKDSFKTSPNNQGINSKRRTKITTVRLKISFKGNRTISRTKIRSSCKARTS 528
+ FK G + T+ITT + N+TI + + S + R
Sbjct: 711 FVETSDDTIQEIGFKVRSMLSGRGPSKETRITTTIRHVGQLSNKTILTSMLTESNRNRAL 770
Query: 529 ME*TNLTM-SKGRANFRIKPNMLVIIKINYKCKLGSMDTILGK 654
+N + S R+N K + N + + + ++ GK
Sbjct: 771 FSESNQHLASLTRSNTSSKHGKSGALSTNSRSRTRGLASLKGK 813
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 29.1 bits (62), Expect = 3.9
Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 4/163 (2%)
Frame = +1
Query: 178 RKCKEISSTQHGLHPPTKPTRVSR-NRSSKAKISITIMLIILLCPLERTQLQLVQQFQTR 354
+K K++ + + T P R+ NR A +T+ + PL + + +QF
Sbjct: 629 KKVKQLKAREQDTIKTTLPMRLRIFNRFPTAPTMVTMKKVSSEFPLPKIRDSFTRQFADE 688
Query: 355 AAMVG--LKPKDSFKTSPNNQGINSKRRTKITTVRLKISFKGNRTISRTKIRSSCKARTS 528
+ FK G + T+ITT + N+TI + + S + R
Sbjct: 689 FVETSDDTIQEIGFKVRSMLSGRGPSKETRITTTIRHVGQLSNKTILTSMLTESNRNRAL 748
Query: 529 ME*TNLTM-SKGRANFRIKPNMLVIIKINYKCKLGSMDTILGK 654
+N + S R+N K + N + + + ++ GK
Sbjct: 749 FSESNQHLASLTRSNTSSKHGKSGALSTNSRSRTRGLASLKGK 791
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 29.1 bits (62), Expect = 3.9
Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 4/163 (2%)
Frame = +1
Query: 178 RKCKEISSTQHGLHPPTKPTRVSR-NRSSKAKISITIMLIILLCPLERTQLQLVQQFQTR 354
+K K++ + + T P R+ NR A +T+ + PL + + +QF
Sbjct: 651 KKVKQLKAREQDTIKTTLPMRLRIFNRFPTAPTMVTMKKVSSEFPLPKIRDSFTRQFADE 710
Query: 355 AAMVG--LKPKDSFKTSPNNQGINSKRRTKITTVRLKISFKGNRTISRTKIRSSCKARTS 528
+ FK G + T+ITT + N+TI + + S + R
Sbjct: 711 FVETSDDTIQEIGFKVRSMLSGRGPSKETRITTTIRHVGQLSNKTILTSMLTESNRNRAL 770
Query: 529 ME*TNLTM-SKGRANFRIKPNMLVIIKINYKCKLGSMDTILGK 654
+N + S R+N K + N + + + ++ GK
Sbjct: 771 FSESNQHLASLTRSNTSSKHGKSGALSTNSRSRTRGLASLKGK 813
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +2
Query: 371 SNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPE-PKSGPVARPEP--VWSEP 541
+ PR+ PT ++ + PK P++ + T + P PK+ V PEP V EP
Sbjct: 446 ATPRSSVPATPT-ESNLTTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEEP 504
Query: 542 T*LC---PRAGPISESSP 586
+ P P++E+ P
Sbjct: 505 EPVAEPEPEPEPVAEAEP 522
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +2
Query: 371 SNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPE-PKSGPVARPEP--VWSEP 541
+ PR+ PT ++ + PK P++ + T + P PK+ V PEP V EP
Sbjct: 396 ATPRSSVPATPT-ESNLTTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEEP 454
Query: 542 T*LC---PRAGPISESSP 586
+ P P++E+ P
Sbjct: 455 EPVAEPEPEPEPVAEAEP 472
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +2
Query: 371 SNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPE-PKSGPVARPEP--VWSEP 541
+ PR+ PT ++ + PK P++ + T + P PK+ V PEP V EP
Sbjct: 446 ATPRSSVPATPT-ESNLTTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEEP 504
Query: 542 T*LC---PRAGPISESSP 586
+ P P++E+ P
Sbjct: 505 EPVAEPEPEPEPVAEAEP 522
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +2
Query: 371 SNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPE-PKSGPVARPEP--VWSEP 541
+ PR+ PT ++ + PK P++ + T + P PK+ V PEP V EP
Sbjct: 446 ATPRSSVPATPT-ESNLTTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEEP 504
Query: 542 T*LC---PRAGPISESSP 586
+ P P++E+ P
Sbjct: 505 EPVAEPEPEPEPVAEAEP 522
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 377 PRTVSKLRPTIRESIPSA--EPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*L 550
P L PT++E +P+ P LPR Q P ++ P P PV P
Sbjct: 76 PPMTMMLPPTVQEPLPTPVKTPPLPRPPGNLNPVQQPQIPVQRTPPQCPPPPVPHPPQ-- 133
Query: 551 CPRAGPISESSP 586
+ PI +SP
Sbjct: 134 ITQMAPILPTSP 145
>U53332-11|AAK31531.1| 668|Caenorhabditis elegans Protein tyrosine
phosphatase protein2 protein.
Length = 668
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 392 KLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARP 520
+LRPT S PS+ ++ S S + + P++GP A P
Sbjct: 605 RLRPTPNASRPSSARQVTSSRPSSSASSRTSHSRPRTGPQAEP 647
>L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical
protein ZC21.3 protein.
Length = 321
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +3
Query: 624 TGQYG---HNTGQNYQTSQFNGQSYQP--GQFSGQNTQFIGSGSGLGSAQVPFQ 770
TGQY +N+ Q Q+N Q Y P Q++ Q Q G+ S + Q +Q
Sbjct: 8 TGQYNQQQYNSQQQQPQQQYNTQQYNPQQQQYNPQQQQQYGTTSFSSNGQAMYQ 61
>AF015882-1|AAC21678.1| 668|Caenorhabditis elegans protein tyrosine
phosphatase protein.
Length = 668
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 392 KLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARP 520
+LRPT S PS+ ++ S S + + P++GP A P
Sbjct: 605 RLRPTPNASRPSSARQVTSSRPSSSASSRTSHSRPRTGPQAEP 647
>Z92849-5|CAB07430.1| 163|Caenorhabditis elegans Hypothetical
protein H12D21.6 protein.
Length = 163
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 603 QNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQFSGQNTQFIGSGSGLG 749
QN +++ + T Q Q S F GQS Q F G ++ +GS + G
Sbjct: 44 QNSEKLEKTEKSERTRQERQ-SGFGGQSQQSSGFGGSSSNGMGSSNSQG 91
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +2
Query: 377 PRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKS 502
P++ K +P ++ P+ +PK+ +K+V ++ +PKS
Sbjct: 338 PKSAEKKKPDTKKETPTKKPKVELVTAKTVEGEKKETKKPKS 379
>L13200-7|AAA28189.1| 206|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 96
protein.
Length = 206
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +3
Query: 594 GNNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQ 692
G Q Q Q GQY +GQ YQ+ Q QS Q
Sbjct: 38 GQQPFQPQFQQGQYQQPSGQQYQSMQQQFQSPQ 70
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 311 WNVPSYS*SNNSKPGQLWWVSNPRTVSKLRPTIRE-SIPSAEPKLPRSGSKSVSRATEQF 487
+ VPS ++S P + W++N R SK ++E + P + +P VS E+
Sbjct: 2771 FTVPSLLELDDSSPLKNTWLTNTRKNSKGEKKVKENTAPVQQAPVP------VSPPREET 2824
Query: 488 PEPKSGPVAR 517
PEP P R
Sbjct: 2825 PEPTPSPPVR 2834
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/70 (31%), Positives = 28/70 (40%)
Frame = +2
Query: 380 RTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPR 559
RT ++ RES S + P+ S S +T P RP PV P P
Sbjct: 588 RTNAQRESVERESSQSPQLYDPKRIPHSASISTNIPGSPTQ--FNRPPPVLHSPRSALPS 645
Query: 560 AGPISESSPI 589
AGP S P+
Sbjct: 646 AGPFSSPQPV 655
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/70 (31%), Positives = 28/70 (40%)
Frame = +2
Query: 380 RTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPR 559
RT ++ RES S + P+ S S +T P RP PV P P
Sbjct: 588 RTNAQRESVERESSQSPQLYDPKRIPHSASISTNIPGSPTQ--FNRPPPVLHSPRSALPS 645
Query: 560 AGPISESSPI 589
AGP S P+
Sbjct: 646 AGPFSSPQPV 655
>Z49128-2|CAA88959.1| 848|Caenorhabditis elegans Hypothetical
protein M03C11.2 protein.
Length = 848
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 410 RESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPV 529
+E I K +G + + A E PEP++ P+ P+PV
Sbjct: 481 KEEIKKENEKPKLTGIQKLMAAKEAEPEPEAEPLPPPKPV 520
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +2
Query: 401 PTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPIS 574
P+ PS++ P +GS + S+ + Q P P P + P S + + P S
Sbjct: 384 PSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNP-SSSTPTGSSQSTITPEGSTAS 440
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +2
Query: 401 PTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPIS 574
P+ PS++ P +GS + S+ + Q P P P + P S + + P S
Sbjct: 591 PSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNP-SSSTPTGSSQSTITPEGSTAS 647
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +2
Query: 401 PTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPIS 574
P+ PS++ P +GS + S+ + Q P P P + P S + + P S
Sbjct: 591 PSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNP-SSSTPTGSSQSTITPEGSTAS 647
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 398 RPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPI 571
RPT ES P P LP S + + T P PK P RP P+ + P P + P+
Sbjct: 68 RPT--ESPPLPPPPLPLSNPPA--KPTPPPPPPK--PTIRPPPIPASPPPRPPASEPV 119
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 398 RPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPI 571
RPT ES P P LP S + + T P PK P RP P+ + P P + P+
Sbjct: 290 RPT--ESPPLPPPPLPLSNPPA--KPTPPPPPPK--PTIRPPPIPASPPPRPPASEPV 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,252,650
Number of Sequences: 27780
Number of extensions: 379091
Number of successful extensions: 1555
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1460
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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