Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6257
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011091-1|AAR82757.1| 1199|Drosophila melanogaster RE50384p pro...   186   3e-47
AE014297-4551|AAF57015.4| 1097|Drosophila melanogaster CG31028-P...   186   3e-47
AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-P...   185   6e-47

>BT011091-1|AAR82757.1| 1199|Drosophila melanogaster RE50384p
           protein.
          Length = 1199

 Score =  186 bits (453), Expect = 3e-47
 Identities = 92/224 (41%), Positives = 134/224 (59%), Gaps = 12/224 (5%)
 Frame = +3

Query: 63  KLFW---IVFISYLVEPCSSFVLRAYLSQHGLHGEIEFSHKNDTLISIRTNLKPTLQYPD 233
           +L W   I +I+ L+    +  L AY+SQ GLHGEI F   N T + I+ NL+ TLQYPD
Sbjct: 52  QLLWMASICWIASLMSGADAQHLIAYISQRGLHGEITFRQMNATTVEIKANLEATLQYPD 111

Query: 234 GVWRWTIHEFPVDYRDIS-ESRCSEETLGREIIDLTEELGYLIIPGKDHAEFESKNTLTG 410
            VW W +  FPVDY +I  + RC    LG +++   E+L YL++PG + + +E    L G
Sbjct: 112 QVWSWGVRRFPVDYSNIDPDERCELSRLGSQVLSFDEDLEYLVLPGNETSSWERNMQLIG 171

Query: 411 PNGLWGRSIVLETAERDRIICASILSTEKLYETHALAKFTAPVAGTLHFRWISAKEIDES 590
             G+WG+S+VL     +  ICA+I + +   E  A A+F  PVAG++HFRW++  E    
Sbjct: 172 DRGIWGKSLVLTEVNANARICATITTIQSSVEHMAEARFNTPVAGSVHFRWLAPAEGAVG 231

Query: 591 DSYIQADLYHAKA-----VTDKSE---YTEHKWKLFVTDIFDSD 698
           D+ I +DLYH +A       D+S+   +T+H WK++VTDIF  D
Sbjct: 232 DTLIYSDLYHIRAQPAALEEDRSQAGPFTQHHWKIYVTDIFKHD 275


>AE014297-4551|AAF57015.4| 1097|Drosophila melanogaster CG31028-PA,
           isoform A protein.
          Length = 1097

 Score =  186 bits (453), Expect = 3e-47
 Identities = 92/224 (41%), Positives = 134/224 (59%), Gaps = 12/224 (5%)
 Frame = +3

Query: 63  KLFW---IVFISYLVEPCSSFVLRAYLSQHGLHGEIEFSHKNDTLISIRTNLKPTLQYPD 233
           +L W   I +I+ L+    +  L AY+SQ GLHGEI F   N T + I+ NL+ TLQYPD
Sbjct: 7   QLLWMASICWIASLMSGADAQHLIAYISQRGLHGEITFRQMNATTVEIKANLEATLQYPD 66

Query: 234 GVWRWTIHEFPVDYRDIS-ESRCSEETLGREIIDLTEELGYLIIPGKDHAEFESKNTLTG 410
            VW W +  FPVDY +I  + RC    LG +++   E+L YL++PG + + +E    L G
Sbjct: 67  QVWSWGVRRFPVDYSNIDPDERCELSRLGSQVLSFDEDLEYLVLPGNETSSWERNMQLIG 126

Query: 411 PNGLWGRSIVLETAERDRIICASILSTEKLYETHALAKFTAPVAGTLHFRWISAKEIDES 590
             G+WG+S+VL     +  ICA+I + +   E  A A+F  PVAG++HFRW++  E    
Sbjct: 127 DRGIWGKSLVLTEVNANARICATITTIQSSVEHMAEARFNTPVAGSVHFRWLAPAEGAVG 186

Query: 591 DSYIQADLYHAKA-----VTDKSE---YTEHKWKLFVTDIFDSD 698
           D+ I +DLYH +A       D+S+   +T+H WK++VTDIF  D
Sbjct: 187 DTLIYSDLYHIRAQPAALEEDRSQAGPFTQHHWKIYVTDIFKHD 230


>AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-PB,
           isoform B protein.
          Length = 1109

 Score =  185 bits (450), Expect = 6e-47
 Identities = 89/214 (41%), Positives = 129/214 (60%), Gaps = 9/214 (4%)
 Frame = +3

Query: 84  ISYLVEPCSSFVLRAYLSQHGLHGEIEFSHKNDTLISIRTNLKPTLQYPDGVWRWTIHEF 263
           +S+L     +  L AY+SQ GLHGEI F   N T + I+ NL+ TLQYPD VW W +  F
Sbjct: 29  LSFLCLSADAQHLIAYISQRGLHGEITFRQMNATTVEIKANLEATLQYPDQVWSWGVRRF 88

Query: 264 PVDYRDIS-ESRCSEETLGREIIDLTEELGYLIIPGKDHAEFESKNTLTGPNGLWGRSIV 440
           PVDY +I  + RC    LG +++   E+L YL++PG + + +E    L G  G+WG+S+V
Sbjct: 89  PVDYSNIDPDERCELSRLGSQVLSFDEDLEYLVLPGNETSSWERNMQLIGDRGIWGKSLV 148

Query: 441 LETAERDRIICASILSTEKLYETHALAKFTAPVAGTLHFRWISAKEIDESDSYIQADLYH 620
           L     +  ICA+I + +   E  A A+F  PVAG++HFRW++  E    D+ I +DLYH
Sbjct: 149 LTEVNANARICATITTIQSSVEHMAEARFNTPVAGSVHFRWLAPAEGAVGDTLIYSDLYH 208

Query: 621 AKA-----VTDKSE---YTEHKWKLFVTDIFDSD 698
            +A       D+S+   +T+H WK++VTDIF  D
Sbjct: 209 IRAQPAALEEDRSQAGPFTQHHWKIYVTDIFKHD 242


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,764,673
Number of Sequences: 53049
Number of extensions: 644286
Number of successful extensions: 1667
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1661
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)