Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6250
(793 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 22 0.76
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 7.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 7.5
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 9.9
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 9.9
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.8 bits (44), Expect(2) = 0.76
Identities = 7/30 (23%), Positives = 16/30 (53%)
Frame = -3
Query: 281 FYFTTTNEAAAISKKHCNNLRKLKINELYH 192
FY + ++K+ C+ + L + E+Y+
Sbjct: 26 FYGSIMFSMTQVNKEECDYYQNLNLGEIYY 55
Score = 21.4 bits (43), Expect(2) = 0.76
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 155 YYVFKIQYLNPVYGSQC 105
YY++ +Y P GS+C
Sbjct: 54 YYIYNPRYPLPYSGSKC 70
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 289 DVTFTLQLRTKPLQ*AKNIVI 227
DVTFT+Q+R + L N+++
Sbjct: 183 DVTFTIQIRRRTLYYFFNLIV 203
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 289 DVTFTLQLRTKPLQ*AKNIVI 227
DVTFT+Q+R + L N+++
Sbjct: 183 DVTFTIQIRRRTLYYFFNLIV 203
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 289 DVTFTLQLRTKPLQ*AKNIVI 227
DVTFT+Q+R + L N+++
Sbjct: 183 DVTFTIQIRRRTLYYFFNLIV 203
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 289 DVTFTLQLRTKPLQ*AKNIVI 227
DVTFT+Q+R + L N+++
Sbjct: 183 DVTFTIQIRRRTLYYFFNLIV 203
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 289 DVTFTLQLRTKPLQ*AKNIVI 227
DVTFT+Q+R + L N+++
Sbjct: 183 DVTFTIQIRRRTLYYFFNLIV 203
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 289 DVTFTLQLRTKPLQ*AKNIVI 227
DVTFT+Q+R + L N+++
Sbjct: 183 DVTFTIQIRRRTLYYFFNLIV 203
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 289 DVTFTLQLRTKPLQ*AKNIVI 227
DVTFT+Q+R + L N+++
Sbjct: 251 DVTFTIQIRRRTLYYFFNLIV 271
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 289 DVTFTLQLRTKPLQ*AKNIVI 227
DVTFT+Q+R + L N+++
Sbjct: 251 DVTFTIQIRRRTLYYFFNLIV 271
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 295 FRDVTFTLQLRTKPLQ*AKNIVI 227
+ D+TF + +R K L NI+I
Sbjct: 231 YLDITFNITMRRKTLFYTVNIII 253
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 295 FRDVTFTLQLRTKPLQ*AKNIVI 227
+ D+TF + +R K L NI+I
Sbjct: 231 YLDITFNITMRRKTLFYTVNIII 253
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 242 KKHCNNLRKLKINELY 195
K +CNN RKL N Y
Sbjct: 98 KLYCNNYRKLYYNINY 113
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -1
Query: 751 SYLIFILN**ALNHIGNIIWK 689
+Y + I+ L+H G ++WK
Sbjct: 116 NYEVTIMTKAILHHTGKVVWK 136
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,192
Number of Sequences: 438
Number of extensions: 3372
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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