Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6246
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-7|CAB02987.4| 133|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z77652-3|CAB01115.1| 349|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83114-9|CAB05553.2| 941|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z83114-8|CAJ76944.1| 875|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z83109-10|CAB05520.2| 435|Caenorhabditis elegans Hypothetical p... 28 5.9
U40802-5|AAK19011.2| 339|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL021483-8|CAI79173.1| 941|Caenorhabditis elegans Hypothetical ... 28 5.9
AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cycl... 28 5.9
AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor typ... 28 5.9
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 28 7.9
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 28 7.9
>Z81068-7|CAB02987.4| 133|Caenorhabditis elegans Hypothetical
protein F25H5.6 protein.
Length = 133
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 497 WK*LEKKTDTQRNK-QNLKQKFLHLKYSPTL 408
W+ L K+ Q + Q LK KFLHL+ SP++
Sbjct: 100 WRALRKRQVEQNQRIQKLKTKFLHLQNSPSM 130
>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
protein C44H9.4 protein.
Length = 1099
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = -3
Query: 222 WEKAITVKAYGTNETLNFILEVPLVTNNPANLLHLYSIPNDNNTILIPKNPTIILGNNEF 43
W ++ G E+L +E ++ NN +L +IP +NN +L + T I+ ++F
Sbjct: 426 WNPNQKIEINGQGESLKTSIETVVLGNNRKSLEITATIPKNNNKLLNFQTGTWIVSQSQF 485
>Z77652-3|CAB01115.1| 349|Caenorhabditis elegans Hypothetical
protein C06B3.5 protein.
Length = 349
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = -3
Query: 417 SDIERSLQQLYDRFSTLENAITFSNLGKMHPSIIDPNYLIEQLNYIQ-----NNIDLRLA 253
S +E++ +++ +++S +E + F+ +PSI D L+ QLN + NN+ +
Sbjct: 82 SKLEQTKKEIMEKYSNVE--VRFATFDFTNPSISDYKKLLSQLNEVSIGMLINNVGMLFE 139
Query: 252 FDPNM 238
+ N+
Sbjct: 140 YPENL 144
>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical
protein T01E8.3 protein.
Length = 1299
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -3
Query: 327 PSIIDPNYL--IEQLNYIQNNIDLRLAFDPNMESIHFWEKAITVKAYGTNETLNF 169
P+I+D + ++ LNY N I + + + E ++F KAI + +YG L++
Sbjct: 102 PTILDIRQIREVQTLNYKLNTIKVDDKWKKDREIVNFDSKAILIISYGMGFALSY 156
>Z83114-9|CAB05553.2| 941|Caenorhabditis elegans Hypothetical protein
K09B11.9a protein.
Length = 941
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -3
Query: 372 TLENAITFSNLGKMHPSIIDPNYLIEQLNYIQNNIDLRLAFDPNMESIHF 223
T ENA L K ++ + NY IEQLN + + + +P +S F
Sbjct: 851 TSENANLKDRLAKTEAALAEANYKIEQLNLKPISNGIVVEHEPQADSEEF 900
>Z83114-8|CAJ76944.1| 875|Caenorhabditis elegans Hypothetical
protein K09B11.9b protein.
Length = 875
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -3
Query: 372 TLENAITFSNLGKMHPSIIDPNYLIEQLNYIQNNIDLRLAFDPNMESIHF 223
T ENA L K ++ + NY IEQLN + + + +P +S F
Sbjct: 785 TSENANLKDRLAKTEAALAEANYKIEQLNLKPISNGIVVEHEPQADSEEF 834
>Z83109-10|CAB05520.2| 435|Caenorhabditis elegans Hypothetical
protein F44G3.8 protein.
Length = 435
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 600 TTNNYVNNQKQSLDIMKDFMKAYENDLKHIVTNQLEIARKKDR 472
T NN N + D +D + N+L + ++LEI KKDR
Sbjct: 3 TWNNTFENFVRKNDGFEDIEFIFSNELLTLTLDELEIKYKKDR 45
>U40802-5|AAK19011.2| 339|Caenorhabditis elegans Hypothetical
protein ZC477.5 protein.
Length = 339
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 663 TGNLDENDAIQFENEIRTLKATTNNYVNNQKQSL 562
+ NLD++ A+QF ++I + TT+ Y ++ SL
Sbjct: 153 SSNLDDSVALQFASQINGVVITTDQYRDHASDSL 186
>AL021483-8|CAI79173.1| 941|Caenorhabditis elegans Hypothetical
protein K09B11.9a protein.
Length = 941
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -3
Query: 372 TLENAITFSNLGKMHPSIIDPNYLIEQLNYIQNNIDLRLAFDPNMESIHF 223
T ENA L K ++ + NY IEQLN + + + +P +S F
Sbjct: 851 TSENANLKDRLAKTEAALAEANYKIEQLNLKPISNGIVVEHEPQADSEEF 900
>AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cyclase
protein 23 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 645 NDAIQFENEIRTLKATTNNYVNNQKQSLDIMKDFMKAYENDLKHIVTNQ 499
N+ + IR ++ T NY+ + +D M M+ Y N+L+ +V +
Sbjct: 758 NENPEVRPSIRRVRLNTENYLKVKGSLVDQMMRMMEQYANNLEKLVAER 806
>AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1073
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 645 NDAIQFENEIRTLKATTNNYVNNQKQSLDIMKDFMKAYENDLKHIVTNQ 499
N+ + IR ++ T NY+ + +D M M+ Y N+L+ +V +
Sbjct: 788 NENPEVRPSIRRVRLNTENYLKVKGSLVDQMMRMMEQYANNLEKLVAER 836
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -3
Query: 645 NDAIQFENEIRTLKATTNNYVNNQKQSLDIMKDFMKAYENDLKHIV---TNQLEIARKK 478
N + +R +K Y+N + +D M M+ Y N+L+ +V T LE A ++
Sbjct: 891 NTTPEMRPSLRRIKLNVETYLNIKGSLVDQMTRMMEQYANNLEKLVAERTGMLEEANQR 949
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -3
Query: 645 NDAIQFENEIRTLKATTNNYVNNQKQSLDIMKDFMKAYENDLKHIV---TNQLEIARKK 478
N + +R +K Y+N + +D M M+ Y N+L+ +V T LE A ++
Sbjct: 837 NTTPEMRPSLRRIKLNVETYLNIKGSLVDQMTRMMEQYANNLEKLVAERTGMLEEANQR 895
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,492,917
Number of Sequences: 27780
Number of extensions: 307870
Number of successful extensions: 866
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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