Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6243
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           27   0.73 
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       25   2.2  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   9.0  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 205 STPPTCSSRLTCSHVAH 155
           S PP CS+RL C+ + H
Sbjct: 403 SRPPACSTRLHCTMIRH 419


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -1

Query: 610 SVCLSFYTMLLHANAKLTKYMMLIXRFFQMLNHV*IVLQTCSSLIK 473
           S+  +   MLL A AK    ++ +  F Q  NH+  + Q  S ++K
Sbjct: 104 SIACALSLMLLGAEAKTKDELIQVLGFEQYRNHLHNIHQLYSDMLK 149


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = -2

Query: 681 ASFESLYCCKCYKSDKWRLSSF 616
           A    ++ C CY    W L  F
Sbjct: 75  AEVNGVFFCSCYAPPSWELERF 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,730
Number of Sequences: 2352
Number of extensions: 10557
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)