Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6234
         (576 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0519 - 25131614-25134778                                         28   4.6  
02_01_0138 + 999809-999821,1000456-1001341,1001424-1003221,10037...    28   4.6  

>03_05_0519 - 25131614-25134778
          Length = 1054

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 354 NPFINITIESIISGEPDDRCRWPL 283
           +PF+ + +E I SG+P  + R PL
Sbjct: 546 DPFLTVVVEDIFSGQPVGQARVPL 569


>02_01_0138 + 999809-999821,1000456-1001341,1001424-1003221,
            1003716-1003805,1004034-1004111,1004513-1004518,
            1004849-1004958,1005174-1005369
          Length = 1058

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 488  ACASWVSDTKVKLHSPKKND 429
            A ASW  D  VK+HSP + D
Sbjct: 949  AVASWEQDELVKIHSPMRGD 968


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,804,347
Number of Sequences: 37544
Number of extensions: 305549
Number of successful extensions: 756
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)