Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6233
(626 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 33 0.19
12_02_1112 + 26162188-26162877,26163263-26163634 31 0.99
10_01_0247 + 2594141-2594278,2595091-2595173,2595250-2595451,259... 31 0.99
01_06_0145 + 26964898-26965169,26965319-26965400,26966131-269663... 30 1.3
01_06_0489 + 29754298-29754549,29754639-29754772,29755667-297557... 30 1.7
03_06_0744 + 35910512-35910569,35911145-35911325,35912332-359124... 29 2.3
08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686 29 4.0
07_03_1520 + 27415266-27415507,27415608-27415722,27415761-274158... 29 4.0
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 28 5.3
03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,487... 28 5.3
09_06_0189 + 21443362-21443370,21443462-21443564,21443668-214438... 28 7.0
04_04_0996 + 29990255-29990425,29990797-29990841,29991024-299910... 28 7.0
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 28 7.0
11_01_0107 - 801148-803633,803727-803860,803990-804006,804321-80... 27 9.2
06_03_1117 + 27750291-27750338,27751360-27751812,27751987-277521... 27 9.2
06_02_0066 - 11081446-11081544,11081639-11081846,11083122-110832... 27 9.2
05_04_0297 + 19948851-19949286,19949779-19949885,19949928-19950011 27 9.2
05_01_0315 - 2468267-2468293,2469021-2469070,2469159-2469234,246... 27 9.2
01_06_1228 - 35541160-35541729 27 9.2
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +1
Query: 70 KCRICMGETTEGQVYLGDTVMVDGEKPVTLAELLEQITGVEVENSTLLPNKICKHCKS 243
KC +C G + + + L TV +DG+ TL E L + T E+ + N C CKS
Sbjct: 525 KCTMCQGSSEQCERILDLTVEIDGDIN-TLEEALHRFTSTEILDGDNRYN--CSRCKS 579
>12_02_1112 + 26162188-26162877,26163263-26163634
Length = 353
Score = 30.7 bits (66), Expect = 0.99
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 25 VKALISHLVRGDGAEKCRICMGETTEGQVYLGDTVMVDGEKPVTLAE 165
VK ++ + DG+E C + +++G + + D M+ EK LAE
Sbjct: 265 VKGIVVFDDKNDGSELCNLIASASSDGIIRIWDARMIAKEKTTPLAE 311
>10_01_0247 +
2594141-2594278,2595091-2595173,2595250-2595451,
2595547-2595864
Length = 246
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 342 KRGYSLRCSRKRFSNLPQQEED*KSLATCKRFGSQNEYAVGTHERSRTFQNGLSR 506
K + +CSRKR + LP Q++ ++ +R+ + ++G E S++ +N SR
Sbjct: 167 KNDAAQQCSRKRSAALPVQDKPNTAMTKRERWAQKEARSLGIGETSQSDENCSSR 221
>01_06_0145 +
26964898-26965169,26965319-26965400,26966131-26966345,
26966912-26966975,26967336-26967440
Length = 245
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 112 YLGDTVMVDGEKPVTLAELLEQITGVEVENSTLLPNKICKHCKSSLHDLTLF 267
Y GDTV++ L+ L + G+++ +S+ P HC + H +TLF
Sbjct: 161 YSGDTVVIVSPDSDNLSILQAGLIGLDLRSSSYRPMGKGVHCGNPAHLVTLF 212
>01_06_0489 +
29754298-29754549,29754639-29754772,29755667-29755721,
29755888-29756007,29756048-29756140,29756360-29756474,
29756728-29757077,29757264-29757332,29757902-29758509,
29758577-29758646
Length = 621
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 1 LNMTRQVDVKALISHLVRGDGAEKCRICMGETTEGQVYLGDTVMVDGEK 147
L +R V+ KA + DG KC++ +G EG+ L V DGE+
Sbjct: 79 LRRSRTVEGKAWVRVDAEPDGEGKCKVVIGCDVEGKWVLHWGVSYDGEQ 127
>03_06_0744 +
35910512-35910569,35911145-35911325,35912332-35912419,
35912541-35912726,35913591-35913725,35913803-35913862,
35914609-35914698,35915384-35915515,35916039-35916183,
35916266-35916439,35916629-35916692,35916778-35916847,
35917328-35917445,35918258-35918280,35918398-35918499,
35919831-35920250,35920327-35920563
Length = 760
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 298 WSRTANYLANIGLEKNAATLYVVAANDFRTYRSKRKIENHSQLVKDLGAKMSTRSARM-K 474
WS ++N +G+E+ + ++ R + HSQLVK++ ++S R + +
Sbjct: 524 WSLSSNG-DGLGVERKDLERLNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGGELSR 582
Query: 475 GPERSR 492
GP+ R
Sbjct: 583 GPKICR 588
>08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686
Length = 959
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 296 RLNESMHNFKKSVRSCKLLLQCLHILFGNRVEFSTSTPVICSNSS 162
R E M F +RS K +C H L N+VE S+ ++C + S
Sbjct: 109 RFEEDMVQFISKLRSSKFAARCEHYLCENKVE--KSSILVCIDCS 151
>07_03_1520 +
27415266-27415507,27415608-27415722,27415761-27415815,
27415862-27417849,27418161-27418589
Length = 942
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 160 AELLEQITGVEVENSTLLPNKICKHCKSSLHDLTLFLKLC 279
A ++ IT ++ T L N C H S LH + LFL +C
Sbjct: 199 AVIIVTITKLQFRCITSLVNSPCGHKMSFLHPVILFLCMC 238
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 466 RMKGPERSRMACPECGKGFKNAVRFNAHIRNLKMK-YCTQCGRLNELEFLRS 618
R K R + C C KG+ + AH++ + + CGR+ + RS
Sbjct: 122 RRKHGGRRQWVCARCAKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRKITRS 173
>03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,
48730-48840,48935-49195,49415-49638,49735-49855,
50673-51214,51302-51488,51569-51895,52047-52197,
52287-52424,52918-53013,53276-53357,54411-54679,
54769-54882,55050-55288,55488-55715,55799-55951,
56479-56616,57061-57188,57598-57718,58142-58306,
59486-59633,59772-59898,60025-60118,60119-60268,
60577-60624,60712-60819,61040-61114,61225-61275,
61341-61487,61584-61714,61944-62031,62204-62266,
62336-62582,62830-62981,63056-63126,63214-63370,
63520-63687
Length = 2323
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +3
Query: 360 RCSRKRFSNLPQQEED*KSLATCKRFGSQNEYAVGTHERSRTFQN 494
+CSR+R + LP Q++ ++ +R+ + ++G E S++ +N
Sbjct: 898 QCSRRRSAALPAQDKSNTAMTKRERWAQKEAKSLGIGEMSQSDEN 942
>09_06_0189 +
21443362-21443370,21443462-21443564,21443668-21443819,
21444113-21444475
Length = 208
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 182 VICSNSSAKVTGFSPSTITVSPR*TWPSVVSPIQIRHFSAP 60
V+ S+S+AK +PS + + +W SV +Q H S P
Sbjct: 93 VLGSSSNAKGAHNTPSALPIQDHMSWDSVPPIVQSNHQSLP 133
>04_04_0996 +
29990255-29990425,29990797-29990841,29991024-29991098,
29991481-29991691,29992057-29992442,29993202-29993425,
29993529-29993664,29993699-29993761,29993842-29994021
Length = 496
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 448 MSTRSARMKGPERSRMACPECGKGFKNAVRFNAHI-RNLKMKYCTQCGR 591
+S + +K RS + CP CG N + N + +C CG+
Sbjct: 315 LSNEISSIKEVLRSSVRCPHCGTAISRVSGCNHMLCSNCRQSFCYGCGK 363
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 484 RSRMACPECGKGFKNAVRFNAHIRNLKMKYCTQCGRL 594
R + CPECGK F + H+R+ ++ RL
Sbjct: 185 RDDLTCPECGKVFMSDKAMYGHLRSHPLRKHKGAARL 221
>11_01_0107 -
801148-803633,803727-803860,803990-804006,804321-804504,
804819-804883
Length = 961
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 188 SRWRIQLYYQTKYASTVKVVYTILRSS 268
S W YYQ+ YA + + + LRSS
Sbjct: 750 SAWEFNSYYQSSYAGSTVLEHVSLRSS 776
>06_03_1117 +
27750291-27750338,27751360-27751812,27751987-27752161,
27752227-27752551,27752705-27752786,27752820-27752889,
27753341-27753420,27753514-27753750
Length = 489
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 73 CRICMGETTEGQVYLGDTVMVDGEKPVTLAELLEQITGVEVENSTLLPNKICKHCKSSLH 252
CRIC+ E EG G+T+ ++ LA L Q V+ ++ NKIC CK +
Sbjct: 251 CRICLVELNEG----GETLKMECSCKGELA-LAHQDCAVKW--FSIKGNKICDVCKQEVQ 303
Query: 253 DLTLFL 270
+L + L
Sbjct: 304 NLPVTL 309
>06_02_0066 -
11081446-11081544,11081639-11081846,11083122-11083257,
11083339-11083541,11083616-11083765,11083848-11083964,
11084623-11085119
Length = 469
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 245 LLLQCLHILFGNRVEFSTSTPVICSNSSAKVTGF 144
LL++ LH L RVE+ +TP + S A++ F
Sbjct: 99 LLVKALHWLAQKRVEYIETTPSVPMLSHARIVSF 132
>05_04_0297 + 19948851-19949286,19949779-19949885,19949928-19950011
Length = 208
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 382 RTYRSKRKIENHSQLVKDLGAKMSTRSARMKGPERSRMACPECG 513
RT+RS K E+ + V+D+ +M TRS + +R+A E G
Sbjct: 17 RTWRSGAKREDDDE-VRDVEREMMTRSVAQERDMATRLAAQERG 59
>05_01_0315 -
2468267-2468293,2469021-2469070,2469159-2469234,
2469498-2469575,2469967-2470048,2470146-2470238,
2470564-2470673,2470831-2470893,2471293-2471344,
2471421-2471545,2472681-2472794,2472917-2472961,
2473278-2473337,2474725-2474778,2474944-2474992,
2475071-2475252,2475349-2475404,2475491-2475584
Length = 469
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 235 CKSSLHDLTLFLKLCIDSFKRWSRTANYLANIGLEKNAATLYVV 366
C ++ HDL F K SF RW Y+ G ++ +++VV
Sbjct: 311 CINNCHDLESFWKSWHASFNRWLVRYLYIPLGGAQRKLLSIWVV 354
>01_06_1228 - 35541160-35541729
Length = 189
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +1
Query: 28 KALISHLVRGD--GAEKCRICMGETTEGQVYLGDTVMVDGEKPVTLAELLEQITGVEVEN 201
+A+ S GD GA +C IC+GE EG+ + G P + L +
Sbjct: 110 RAVASAAGDGDDGGAAQCSICLGEFEEGEKVKALPLCGHGFHPECVDAWLRSRPSCPLCR 169
Query: 202 STLLP 216
S+LLP
Sbjct: 170 SSLLP 174
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,767,389
Number of Sequences: 37544
Number of extensions: 349039
Number of successful extensions: 1135
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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