Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6232
(561 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0795 - 32051794-32053362,32053452-32053595,32054102-320549... 32 0.27
07_03_0439 + 18212584-18213065,18214164-18215010 31 0.83
08_02_0819 - 21529913-21530064,21531016-21531082,21531284-215313... 29 1.9
12_02_0589 + 20850249-20850491,20850583-20851839 29 2.5
04_04_1499 - 34006999-34007232,34007371-34007440,34007580-340076... 29 2.5
11_01_0113 + 881806-881996,882831-882921,883140-883255,884489-88... 29 3.4
02_02_0183 + 7576901-7576908,7577666-7578176 29 3.4
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 28 4.4
09_06_0280 + 22010270-22011407,22011890-22013097 28 4.4
04_03_0362 + 14934236-14934541,14935549-14935647,14935736-149357... 28 4.4
03_06_0648 + 35280492-35280645,35281742-35281820,35282491-352825... 28 4.4
03_02_1009 + 13189349-13189592,13189782-13189882,13191085-131910... 28 4.4
10_01_0001 - 22485-22526,23308-23436,24346-24473,24801-24862,253... 27 7.7
09_04_0681 + 19416207-19416515,19416537-19416756,19416848-19417455 27 7.7
07_03_0573 + 19614899-19617155,19617384-19617476,19618103-19618125 27 7.7
03_06_0410 - 33728507-33729415,33729511-33729654,33730054-337309... 27 7.7
03_06_0069 - 31449319-31450368 27 7.7
03_01_0092 - 731069-731434,731569-733080 27 7.7
01_06_1281 - 35966121-35966392,35966406-35966574,35966607-35966918 27 7.7
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 27 7.7
>01_06_0795 -
32051794-32053362,32053452-32053595,32054102-32054965,
32055335-32055892
Length = 1044
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 15 TLVPGLSSQYVFEVFISVSGRPR--RSCGPRVLQMPRRLRFLPSPHLL 152
TL+ L+S F+ ++GR C PR + PR L +L SPH+L
Sbjct: 324 TLLRNLTSNLTFQEAYDMTGRILVVTVCSPRKHEPPRCLNYLTSPHVL 371
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 30.7 bits (66), Expect = 0.83
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +2
Query: 272 LSAERGHSLSPQSPLLTVR-DCTASSLMKTSATFSGT---AGTEKPPAISAAPDLPTTES 439
L+A H + P SP ++ D + +A S T A + PP+ ++A L T
Sbjct: 15 LAATSWHCVHPPSPTVSTHWDAASHEARGAAAASSPTSPRAASTNPPSATSAEPLHTCVF 74
Query: 440 PASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLAR 544
S G R + Q A+P + +P LAR
Sbjct: 75 SGSVAGPSRQAALSYLTTQPSRMARPLLAAPHLAR 109
>08_02_0819 -
21529913-21530064,21531016-21531082,21531284-21531373,
21531506-21531622,21532026-21532145,21532313-21533581
Length = 604
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +2
Query: 287 GHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPAS 448
G + +PQ+ +VR CT+ SL + SA GTA T + A SA +T S +S
Sbjct: 47 GGTPAPQAAASSVRRCTSPSLSRASAA-EGTASTNR--AQSAERRRSSTPSSSS 97
>12_02_0589 + 20850249-20850491,20850583-20851839
Length = 499
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 295 AVSSLRTQRCEGSRSSRSSIWNLWRRKRDRCRRFSVRLHRCRTSSI 158
A SSL T S S R ++ +WR+ R+ R+FS ++C +S+
Sbjct: 270 AYSSLLT--LYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSL 313
>04_04_1499 -
34006999-34007232,34007371-34007440,34007580-34007637,
34007940-34007979,34008183-34008259,34008366-34008582,
34008703-34009266
Length = 419
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 274 ECGERTQLEPPISTPHCSRLYGIF 345
+ GERT L PP H R++G+F
Sbjct: 144 DSGERTPLPPPSQQQHQDRIHGLF 167
>11_01_0113 +
881806-881996,882831-882921,883140-883255,884489-885260
Length = 389
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 280 RTQRCEGSRSSRSSIWNLWRRKRDR 206
R RC G ++RS+ LWRR+R R
Sbjct: 20 RVSRCSGRPATRSAPSILWRRRRPR 44
>02_02_0183 + 7576901-7576908,7577666-7578176
Length = 172
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 304 GAQAVSSLRTQRCEGSRSSRSSIWNLWRRKRDRCRR 197
G V + +R EG S + W WRR+R RC R
Sbjct: 108 GGGGVGWMGMRRAEGGGSGSVARWRRWRRRR-RCGR 142
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 28.3 bits (60), Expect = 4.4
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 335 TASSLMKTSATFSGT-AGTEKPPAI-SAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA 508
T SS+M++SAT GT A + P A+ SA P P T +P + R+ SA
Sbjct: 152 TDSSMMQSSAT--GTQAAVQGPSAVASAVPMTPVTAAPTTVPSTTTARAGTDSAIAVASA 209
Query: 509 AQPPVRSPTLARS 547
V + +A S
Sbjct: 210 GSTTVSTVAVAPS 222
>09_06_0280 + 22010270-22011407,22011890-22013097
Length = 781
Score = 28.3 bits (60), Expect = 4.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 481 NEEVANGFGCPAPGEVSNAGSFSRHAH 561
N + AN + CP PGE + S +++
Sbjct: 275 NNQAANNWSCPTPGEARRSACISNNSY 301
>04_03_0362 +
14934236-14934541,14935549-14935647,14935736-14935798,
14935878-14935940,14937242-14937362,14937472-14937872,
14937968-14938141,14938252-14938570,14938659-14938735,
14938808-14938877,14938951-14939007,14939100-14939314,
14939436-14939561,14939649-14939944,14940032-14940203,
14940300-14940398,14940471-14940602,14940692-14940792,
14941391-14941580,14941819-14941842
Length = 1034
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +1
Query: 379 CWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRH 555
CW G + RY+CSP VCM ++P + + P EV + G H
Sbjct: 77 CWRGLSRRYKCSPERTV---LSVCMLTGEMPRVQTSRLGKN-----PIEVDSDGGEDLH 127
>03_06_0648 +
35280492-35280645,35281742-35281820,35282491-35282593,
35282695-35282815,35283144-35283232,35283324-35283473,
35285842-35287161
Length = 671
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +2
Query: 209 VSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGT 388
+ S+P +PN AER +LS Q+P+++ + S M S G
Sbjct: 290 IGRSSPSVPNPPLGPR------GAERSSNLSSQTPVISSSGLSYGSGMHVGNANSRVNGN 343
Query: 389 EKPPAISAAP---DLPTTE 436
P + P D+P TE
Sbjct: 344 SVQPTVELLPSFKDVPNTE 362
>03_02_1009 +
13189349-13189592,13189782-13189882,13191085-13191090,
13191712-13191933,13192052-13192137,13192330-13192426,
13192817-13192909,13193031-13193186
Length = 334
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 272 LSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDL 424
L RG SP P T+S SAT +GT G + PP + + PD+
Sbjct: 33 LGLSRGAGPSPPPP---PSSSTSSFPAAASATAAGTGG-DAPPIVGSCPDM 79
>10_01_0001 -
22485-22526,23308-23436,24346-24473,24801-24862,
25388-25585,25807-25898,26941-26994
Length = 234
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 163 WKCDNGVAELKTCGNGLAFDATDSKYLTEN-CDYLHNVECGERTQLEPPIS 312
W C G E CG + A ++ + C Y + CG +L+PP S
Sbjct: 9 WACTGGSQEA-ICGPEASKLAIAVPTISSSSCSYFYRYRCGRYEELKPPSS 58
>09_04_0681 + 19416207-19416515,19416537-19416756,19416848-19417455
Length = 378
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 368 FSGTAGTEKPPAISAAPDLPTTESPAS 448
F+G AG PPA+S +P +P S
Sbjct: 334 FAGAAGFHAPPAVSVRSVIPVCAAPPS 360
>07_03_0573 + 19614899-19617155,19617384-19617476,19618103-19618125
Length = 790
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/55 (38%), Positives = 24/55 (43%)
Frame = +2
Query: 278 AERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESP 442
AER LS PLL SSL T+ + PPA S A L TT +P
Sbjct: 11 AERSSRLSHSRPLLRRAGSACSSLTTTTTSQHRHGRRRAPPAESNA--LTTTAAP 63
>03_06_0410 -
33728507-33729415,33729511-33729654,33730054-33730920,
33731371-33731913
Length = 820
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 18 LVPGLSSQYVFEVFISVSGRPR--RSCGPRVLQMPRRLRFLPSPHLL 152
L+ L+ F+ ++GR C PR + PR L +L SPH++
Sbjct: 321 LLRDLTGNLTFQEAYDMTGRVLGVTVCSPRKNEPPRCLNYLTSPHVV 367
>03_06_0069 - 31449319-31450368
Length = 349
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 335 TASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPAS 448
+A S + +A S T G + PP AAP++ PA+
Sbjct: 296 SALSSVSAAAPTSNTVGMDLPPVSLAAPEMQYWNGPAA 333
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +2
Query: 362 ATFSGTAGTEKPPAISAAPDLPTTESPASACGL--IRFRSAKTKK*QTDSAAQPP 520
A A T +PP +S AP PA+ GL +R ++ AA PP
Sbjct: 45 ALHGAAAATARPPPVSLAPAPVAVAPPATPAGLSALRVHASPPPPPVKQHAAPPP 99
>01_06_1281 - 35966121-35966392,35966406-35966574,35966607-35966918
Length = 250
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = -3
Query: 316 EWRLGAQAVSSLRTQRC---EGSRSSRSSIWNLWR 221
+WR + LR+QRC EG RS + +WR
Sbjct: 156 KWRRSGRCQRGLRSQRCTAREGFRSKEEMLGIVWR 190
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 362 ATFSGTAGTEKPPAISAAPDLPTTESPASACGL 460
A SGTA T P S+AP P+T +P A +
Sbjct: 489 ANSSGTANTAGPSP-SSAPSTPSTHTPGDAMSM 520
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,631,400
Number of Sequences: 37544
Number of extensions: 359312
Number of successful extensions: 1440
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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