Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6227
(513 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 84 1e-16
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 78 6e-15
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 78 6e-15
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 73 2e-13
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 73 2e-13
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 69 5e-12
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 69 5e-12
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 66 3e-11
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 60 1e-09
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 50 1e-06
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 50 1e-06
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 50 1e-06
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 50 2e-06
AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p pro... 31 0.69
AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA... 31 0.69
AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p pro... 30 2.1
AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation i... 30 2.1
AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,... 30 2.1
AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,... 30 2.1
AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,... 30 2.1
AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,... 30 2.1
AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,... 30 2.1
AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,... 30 2.1
AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,... 30 2.1
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 29 4.9
AE014298-3207|ABI31000.1| 374|Drosophila melanogaster CG41477-P... 28 8.5
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/129 (34%), Positives = 68/129 (52%)
Frame = +2
Query: 32 YPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAP 211
Y ++ RSK+SL NK+T+YK + P Y ++ A H+K Q IQ++ R+ G
Sbjct: 777 YWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCE 836
Query: 212 WFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSPRR 391
WFVRN LH DL L ++ + S R+ D+ RH N L A P R+ + R+
Sbjct: 837 WFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASALNR--SRPPRRL--NRRQ 892
Query: 392 PKHVISDPP 418
P+ +I+ P
Sbjct: 893 PRDLITRSP 901
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/100 (35%), Positives = 60/100 (60%)
Frame = +2
Query: 29 LYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGA 208
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R ++ Q QSR RI GA
Sbjct: 767 LHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
Query: 209 PWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 328
PW++RN ++H DL ++ + + + ++ +K H NPL
Sbjct: 827 PWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/100 (35%), Positives = 60/100 (60%)
Frame = +2
Query: 29 LYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGA 208
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R ++ Q QSR RI GA
Sbjct: 767 LHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
Query: 209 PWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 328
PW++RN ++H DL ++ + + + ++ +K H NPL
Sbjct: 827 PWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Frame = +2
Query: 20 LGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIA 199
+ R+ +I R+K+SL KV +YK+ + P + Y V+ AA+ HL +I+Q++ R
Sbjct: 778 VARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRI 837
Query: 200 VGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPAD-RME 376
GAPW++R D+ DL + + LQ+ + ++ ++ H N L G AD R
Sbjct: 838 SGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTR 897
Query: 377 SSPRRPKHVISDPPD 421
R +H D P+
Sbjct: 898 VKRRLKRHHPHDLPN 912
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Frame = +2
Query: 20 LGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIA 199
+ R+ +I R+K+SL KV +YK+ + P + Y V+ AA+ HL +I+Q++ R
Sbjct: 580 VARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRI 639
Query: 200 VGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPAD-RME 376
GAPW++R D+ DL + + LQ+ + ++ ++ H N L G AD R
Sbjct: 640 SGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLERLNVHPNSLARKLGTAAVVNADPRTR 699
Query: 377 SSPRRPKHVISDPPD 421
R +H D P+
Sbjct: 700 VKRRLKRHHPHDLPN 714
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 68.5 bits (160), Expect = 5e-12
Identities = 27/87 (31%), Positives = 52/87 (59%)
Frame = +2
Query: 17 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRI 196
I+ LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ A+ H+K QI Q++ ++
Sbjct: 797 IICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 856
Query: 197 AVGAPWFVRNVDLHDDLDLESISKYLQ 277
+ P++ LH ++ + + +Q
Sbjct: 857 IMNLPYYTNTKYLHIKAGVQKVQQKIQ 883
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 68.5 bits (160), Expect = 5e-12
Identities = 27/87 (31%), Positives = 52/87 (59%)
Frame = +2
Query: 17 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRI 196
I+ LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ A+ H+K QI Q++ ++
Sbjct: 745 IICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 804
Query: 197 AVGAPWFVRNVDLHDDLDLESISKYLQ 277
+ P++ LH ++ + + +Q
Sbjct: 805 IMNLPYYTNTKYLHIKAGVQKVQQKIQ 831
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 66.1 bits (154), Expect = 3e-11
Identities = 29/97 (29%), Positives = 54/97 (55%)
Frame = +2
Query: 38 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWF 217
++ R+S M+LR K +Y C+ P+ Y ++ AA+ + Q++Q+R R P++
Sbjct: 785 LLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYY 844
Query: 218 VRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 328
VR LH DL+L ++ + + + R+ D+ RH + L
Sbjct: 845 VRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/79 (34%), Positives = 50/79 (63%)
Frame = +2
Query: 29 LYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGA 208
L+ +I S +SL +KV LY + ++P+ TY S ++ +A+ ++ Q QS+ R GA
Sbjct: 769 LHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGA 828
Query: 209 PWFVRNVDLHDDLDLESIS 265
PW+VR+ ++ DL++ S++
Sbjct: 829 PWYVRSENIQRDLNIPSVT 847
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 38 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPW 214
+I + S + K+ L+K + P+ YA ++ + K Q +++++ R + A
Sbjct: 842 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
Query: 215 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI 331
+ R D+ +++S + AS R+ + HENPLI
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 38 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPW 214
+I + S + K+ L+K + P+ YA ++ + K Q +++++ R + A
Sbjct: 842 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
Query: 215 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI 331
+ R D+ +++S + AS R+ + HENPLI
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 38 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPW 214
+I + S + K+ L+K + P+ YA ++ + K Q +++++ R + A
Sbjct: 842 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
Query: 215 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI 331
+ R D+ +++S + AS R+ + HENPLI
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 38 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPW 214
+I + S + K+ L+K + P+ YA ++ + K Q +++++ R + A
Sbjct: 395 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 454
Query: 215 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI 331
+ R D+ +++S + AS R+ + HENPLI
Sbjct: 455 YTRQADIRTKYNIKSFDETFDKASQRYANSLTDHENPLI 493
>AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p
protein.
Length = 543
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 109 DGAYASFVECHLISKG-HFTSPTYHRVET 26
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA
protein.
Length = 543
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 109 DGAYASFVECHLISKG-HFTSPTYHRVET 26
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p
protein.
Length = 422
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 248 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSPRRPKHVISDPPDP 424
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 425 L 427
+
Sbjct: 105 M 105
>AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation
initiation factor 5C protein.
Length = 422
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 248 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSPRRPKHVISDPPDP 424
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 425 L 427
+
Sbjct: 105 M 105
>AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,
isoform G protein.
Length = 422
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 248 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSPRRPKHVISDPPDP 424
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 425 L 427
+
Sbjct: 105 M 105
>AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,
isoform F protein.
Length = 422
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 248 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSPRRPKHVISDPPDP 424
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 425 L 427
+
Sbjct: 105 M 105
>AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,
isoform E protein.
Length = 422
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 248 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSPRRPKHVISDPPDP 424
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 425 L 427
+
Sbjct: 105 M 105
>AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,
isoform D protein.
Length = 422
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 248 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSPRRPKHVISDPPDP 424
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 425 L 427
+
Sbjct: 105 M 105
>AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,
isoform C protein.
Length = 422
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 248 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSPRRPKHVISDPPDP 424
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 425 L 427
+
Sbjct: 105 M 105
>AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,
isoform B protein.
Length = 422
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 248 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSPRRPKHVISDPPDP 424
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 425 L 427
+
Sbjct: 105 M 105
>AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,
isoform A protein.
Length = 422
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 248 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSPRRPKHVISDPPDP 424
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 425 L 427
+
Sbjct: 105 M 105
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = -3
Query: 223 PDEP--RGSDGYPAKTGLNNLKG 161
P EP +G GYP + G+N LKG
Sbjct: 1096 PGEPGAKGLGGYPGRNGINGLKG 1118
>AE014298-3207|ABI31000.1| 374|Drosophila melanogaster CG41477-PA
protein.
Length = 374
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 94 LHTPRHDLCKCSVRSRGPHT-LKI 162
L+T RH CKC + R P T LKI
Sbjct: 100 LNTKRHGECKCKCKCRSPDTKLKI 123
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,438,097
Number of Sequences: 53049
Number of extensions: 483162
Number of successful extensions: 1348
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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