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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6211
         (791 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1214 + 35470688-35471340,35471617-35471701,35471750-354719...    35   0.064
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344...    34   0.15 
07_03_0808 - 21668100-21669092                                         32   0.60 
01_07_0014 - 40455673-40455723,40455815-40455892,40455987-404560...    32   0.60 
10_08_0029 + 14270945-14271364,14271449-14272486                       31   1.0  
12_02_0406 - 18648414-18648809,18650049-18650180,18650959-186510...    30   2.4  
04_03_0904 + 20717005-20718087                                         30   2.4  
02_02_0668 + 12776945-12777478,12777801-12777824,12777863-12777913     30   2.4  
01_06_1834 + 40214378-40214563,40214728-40214818,40215006-402150...    30   2.4  
10_08_0410 - 17716370-17716743,17716839-17716939,17717104-177173...    29   3.2  
09_04_0434 - 17533633-17534637                                         29   3.2  
09_02_0195 + 5643549-5645090                                           29   3.2  
08_01_1013 + 10251463-10251858,10252366-10252434,10252545-102526...    29   3.2  
04_01_0244 - 3194141-3195091,3195301-3195312                           29   3.2  
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426...    29   3.2  
03_06_0553 - 34682581-34683183,34683687-34683842,34684154-346842...    29   3.2  
03_05_0358 - 23438416-23439282,23440116-23440163,23440343-234403...    29   3.2  
02_05_0917 - 32714156-32714319,32714400-32714457,32714548-327146...    29   3.2  
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877...    29   5.6  
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056...    29   5.6  
01_04_0051 + 15430980-15431591                                         29   5.6  
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409...    28   7.4  
09_01_0007 + 212984-213949                                             28   7.4  
05_03_0035 - 7592177-7592938                                           28   7.4  
05_03_0033 - 7585267-7586028                                           28   7.4  
02_03_0152 - 15767985-15768317                                         28   7.4  
02_01_0382 - 2772378-2773544                                           28   7.4  
12_01_1000 + 10138260-10138652,10138832-10139017,10139190-101394...    28   9.8  
11_04_0154 + 14172294-14172459,14172993-14173054,14174781-141748...    28   9.8  
09_01_0006 - 206409-207464                                             28   9.8  
07_03_1180 - 24601631-24602142,24602518-24602581,24602811-246028...    28   9.8  
03_05_0571 - 25713519-25714064,25714673-25714804                       28   9.8  
03_04_0162 + 17858802-17861168                                         28   9.8  
01_06_1327 + 36337578-36337976,36338068-36338397,36338523-363386...    28   9.8  

>01_06_1214 +
           35470688-35471340,35471617-35471701,35471750-35471906,
           35472086-35472189
          Length = 332

 Score = 35.1 bits (77), Expect = 0.064
 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +3

Query: 3   APHVHGRTPVRRRGHQHHP-RLRGDRQPAPATNPDPEPSARTTLTQTDDVVP 155
           +P   G  P+  R H HHP RL     P P     P+P  RT+     D  P
Sbjct: 13  SPPTTGLNPIHGRRHGHHPSRLLASSAPPPPPPRPPKPEPRTSHENLGDDTP 64


>04_04_0466 +
           25433678-25434007,25434118-25434176,25434345-25434426,
           25435024-25435122,25435750-25435831,25436759-25436823,
           25437241-25438308,25438369-25438446,25438550-25438596,
           25438734-25438779,25438871-25438950,25439050-25439166,
           25439842-25439923,25440156-25440281,25440415-25440489,
           25440743-25440868,25441542-25441646
          Length = 888

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
 Frame = +3

Query: 75  RQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSES---QDVTRTNSDDALSNSNLTVAED 245
           ++   A  PD    +R  L+QT++++  +  +S S   QD      DD  +  +    E 
Sbjct: 464 KEEVQAPFPDVSKVSRDVLSQTENILGALMLLSRSLSPQDKESVMVDDGSNKEDSVKEEQ 523

Query: 246 CANDEQENELDRVKS 290
           CA+D  +N+ D V +
Sbjct: 524 CASDYTDNDDDAVST 538


>07_03_0808 - 21668100-21669092
          Length = 330

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +3

Query: 21  RTPVRRRGHQHHPRLRG-DRQPAPATNPDPEPSA 119
           R P R RGHQH P LR      AP   P P  SA
Sbjct: 140 RRPRRARGHQHQPALRHLPPSTAPRRTPPPPGSA 173


>01_07_0014 -
           40455673-40455723,40455815-40455892,40455987-40456049,
           40456250-40456390,40456851-40456949,40457403-40457477,
           40457556-40457652,40457738-40457805,40458456-40458512,
           40458613-40458671,40458798-40458921,40459208-40459264,
           40459378-40459457,40459585-40459793,40459868-40459986
          Length = 458

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = +3

Query: 81  PAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRTNSDDALSNSNLTVAEDCANDE 260
           P  A    P  +   T  + D+ +  +   +E       ++DD   N N+ V  D A DE
Sbjct: 9   PRGAAKLVPVEAEPPTQEEIDEAIKAIAQHTEGGSDADEDADDGEENGNMEV--DAAADE 66

Query: 261 QENELDRV 284
           +E E+D V
Sbjct: 67  EEEEVDEV 74


>10_08_0029 + 14270945-14271364,14271449-14272486
          Length = 485

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +2

Query: 8   PRPRSHPRAAQGAPTPPAFKGRPSTRPRHESRPRAV 115
           PR R+ P   Q  P PP F+ +PS R R    PR+V
Sbjct: 374 PRQRTEPHLPQPPPPPPHFERQPSRR-RGGGVPRSV 408


>12_02_0406 -
           18648414-18648809,18650049-18650180,18650959-18651065,
           18652979-18653183
          Length = 279

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -3

Query: 789 PCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRISRGPP 652
           PC    P    +A +   R+ +RP  P  AW+ R+    R+S  PP
Sbjct: 165 PCDLGGPRLVGQAAHCNIRLPQRPALPAGAWK-RAPATSRLSTQPP 209


>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 8   PRPRSHPRAAQGAPTPPAFKGRPSTRPRHESRPR 109
           P+P+  P      PTPP++K +P   P    +P+
Sbjct: 200 PQPKPTPTPYTPTPTPPSYKPQPKPNPPPTYKPQ 233



 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 8   PRPRSHPRAAQGAPTPPAFKGRPSTRPRHESRPR 109
           P+P+  P      PTPP +K +P   P    +P+
Sbjct: 128 PQPKPTPAPYTPTPTPPTYKPQPKPTPPPTYKPQ 161



 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 8   PRPRSHPRAAQGAPTPPAFKGRPSTRP 88
           P+P+  P      PTPP++K +P   P
Sbjct: 160 PQPKPTPTPYTPTPTPPSYKPQPKPTP 186



 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 8   PRPRSHPRAAQGAPTPPAFKGRPSTRP 88
           P+P+  P      PTPP++K +P   P
Sbjct: 180 PQPKPTPTPYTPTPTPPSYKPQPKPTP 206


>02_02_0668 + 12776945-12777478,12777801-12777824,12777863-12777913
          Length = 202

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 17  RSHPRAAQGAPTPPAFKGRPSTRPRHESRPRAV 115
           R  P   +G P PP F  R   RP   S+P A+
Sbjct: 4   RRQPEPTRGTPKPPLFVVRGDRRPPLRSKPEAL 36


>01_06_1834 +
           40214378-40214563,40214728-40214818,40215006-40215093,
           40215444-40215695,40215927-40216101,40216243-40216329,
           40216445-40216513,40216638-40216734,40217010-40217092,
           40217373-40217480,40217672-40217793,40217921-40218028,
           40218121-40218194,40218492-40218617,40219655-40219722,
           40219930-40220079,40220164-40220214,40220678-40220734,
           40220824-40220970,40221064-40221155,40221516-40221625,
           40221728-40221791,40221883-40222032,40222554-40222788
          Length = 929

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 486 FFAACFLFRPRPRYIH*YIEVLQVLQFQGHHR 391
           F+  CF+F P   Y   +  ++  LQFQG H+
Sbjct: 74  FYKGCFMFEPHSGYD--WFVIVDCLQFQGDHK 103


>10_08_0410 -
           17716370-17716743,17716839-17716939,17717104-17717300,
           17717392-17717677,17717768-17718004,17718226-17718281,
           17720042-17721226
          Length = 811

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 45  HQHHPRLRGDRQPAPATNPDPEPSARTTLT-QTDDVVPCVNSVSESQDVTR 194
           H HH  L      A A  P P P A T LT Q ++ VP  + V  + DV R
Sbjct: 17  HHHHAHLPALPHLA-APPPPPPPPAETELTEQREEEVPVDDVVEAAADVPR 66


>09_04_0434 - 17533633-17534637
          Length = 334

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 39  RGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPC 158
           RGHQH P     ++P     P P  SA   ++    V PC
Sbjct: 267 RGHQHKPE---PQEPRQLRRPPPHLSAAAAVSAAQPVEPC 303


>09_02_0195 + 5643549-5645090
          Length = 513

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 2   RTPRPRSHPRAAQGAPT-PPAFKGRPSTRPRHESRP 106
           R P+ RS PR      + PP+   RPS+  RHE  P
Sbjct: 374 RLPKHRSVPRDIPSTSSQPPSASERPSSMARHEPSP 409


>08_01_1013 +
           10251463-10251858,10252366-10252434,10252545-10252652,
           10253261-10253326,10254258-10254395,10255047-10255094,
           10256292-10256398,10257228-10257302,10258317-10258368,
           10258485-10259068,10259944-10260150,10260236-10260407
          Length = 673

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
 Frame = +3

Query: 60  RLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRTNSD----DALSNSN 227
           R R   +  P   P PEP A  +  + DD +P         +      D    D +  S 
Sbjct: 36  RFRPRAKGKPKPKPKPEPKAEDSKLKADDSIPMSKPEEPKPEAAAPMEDSMEVDGVGPSA 95

Query: 228 LTVAEDCANDEQENELDRV 284
              AE    +E E+E D V
Sbjct: 96  SASAEGVGAEEVEDEEDYV 114


>04_01_0244 - 3194141-3195091,3195301-3195312
          Length = 320

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/46 (34%), Positives = 19/46 (41%)
 Frame = +2

Query: 8   PRPRSHPRAAQGAPTPPAFKGRPSTRPRHESRPRAVCANDLNSNRR 145
           PR    P A    P PPA    P+  P H S P +  +  L S  R
Sbjct: 209 PRNPPPPAAPAAPPVPPAVPAAPAPAPVHMSAPASALSFALASAAR 254


>03_06_0704 +
           35641774-35642031,35642122-35642446,35642546-35642699,
           35643662-35643706,35644121-35644180,35644532-35644694,
           35645356-35645717,35645985-35646303
          Length = 561

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 60  RLRGDRQPAPATNPDPEPSARTTLTQTD 143
           R R  + P P T+ DP+PS   T TQ D
Sbjct: 103 RYRDRKPPPPPTHRDPKPSLPPTTTQRD 130


>03_06_0553 -
           34682581-34683183,34683687-34683842,34684154-34684272,
           34684691-34684793,34685027-34685299,34685411-34685602,
           34686691-34687029
          Length = 594

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -3

Query: 774 PPTTCSRAPYVRARIHRRPGWPRTAWRW 691
           PP+TC  A  V AR  RR  W  T  RW
Sbjct: 71  PPSTCCEAAAVAARTARRT-WDLTVGRW 97


>03_05_0358 -
           23438416-23439282,23440116-23440163,23440343-23440382,
           23440459-23440610
          Length = 368

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -3

Query: 156 KAQHRLFELRSFAQTARGR-DSWRGRVDGRPLNAGGVGAPCAARGC-DRGR 10
           +A+HRL E    +   RG  DS  GR+  R    GGVG    ARG  D GR
Sbjct: 206 RARHRLVEGSETSLAQRGTADSSGGRLGARGAG-GGVGGRLGARGATDGGR 255


>02_05_0917 -
           32714156-32714319,32714400-32714457,32714548-32714618,
           32715280-32715403,32715511-32715582,32715675-32715950
          Length = 254

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 41  GAPTPPAFKGRPSTRPRHESRPRAVCAND 127
           GAPTPP FK  P  R + + R R V A +
Sbjct: 8   GAPTPPRFKRSPH-RKKRQPRTRRVAAGE 35


>08_01_0892 -
           8778097-8778236,8778390-8778486,8778568-8778747,
           8779138-8779247,8781153-8781294,8782298-8782686,
           8782752-8782834,8783524-8785244,8785894-8786040,
           8786121-8786264,8786669-8786741,8787413-8787633
          Length = 1148

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 147 VVPCVNSVSESQDVTRTNSDDALSNS 224
           V PC++ +SE+ DV R +  D+L NS
Sbjct: 543 VHPCLSEISEANDVDRDDRVDSLVNS 568


>07_03_1710 -
           28903614-28903673,28904982-28905146,28905453-28905638,
           28905784-28905927,28906281-28906460,28906559-28907215
          Length = 463

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 8   PRPRSHPRAAQGAPTPPAFKGRPSTRPRHESRPRAV 115
           P P   P +   APTPP  + RP + P  + +PR V
Sbjct: 60  PSPTPPPASPPPAPTPP--QTRPPSPPPQQQQPRPV 93


>01_04_0051 + 15430980-15431591
          Length = 203

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 650 GGGPREIRGASRDRHRQAVRGQP 718
           GG P  ++ A RD HR+A+R +P
Sbjct: 93  GGAPAWVQDARRDAHRRALRRRP 115


>09_03_0218 +
           13539481-13540082,13540171-13540276,13540645-13540960,
           13541187-13541263,13541269-13541895,13542783-13543112,
           13543442-13543747,13543824-13543896,13544004-13544089,
           13544219-13544396,13545311-13545756
          Length = 1048

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = -3

Query: 117 QTARGRDSWRGRVDGRPLNAGGVGAPCAARGCDRGRG 7
           +  RGR   RGR  GR    G V      RG  RGRG
Sbjct: 40  ERGRGRGRGRGRGRGRGRRGGAVRGRGRGRGRCRGRG 76


>09_01_0007 + 212984-213949
          Length = 321

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
 Frame = +3

Query: 9   HVHGRTPVRRRGHQHHPRLRG-DRQPAPATNPDPEPSARTTLTQTDDVV--PCVNSVSES 179
           H++   P RRR HQHH  L    R+  P     P+  A    +   D    P V S  +S
Sbjct: 89  HIYKPPPARRRPHQHHTTLFDLSRKVWPQFQHPPQAQAVHISSHGADSASGPIVISSDDS 148

Query: 180 Q-DVTRTNSDDALSNSNLTVAEDCAN 254
              +  +++D A ++S+  V    +N
Sbjct: 149 SGHIVISSNDGAGADSDAMVVSLSSN 174


>05_03_0035 - 7592177-7592938
          Length = 253

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 8   PRPRSHPRAAQGAPTPPAFKGRPSTRPRHESRPRA 112
           P P++ P++   A   P  K    ++P  ES+P A
Sbjct: 191 PEPKTEPKSESKAEPKPERKSYSKSKPEPESKPEA 225


>05_03_0033 - 7585267-7586028
          Length = 253

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 8   PRPRSHPRAAQGAPTPPAFKGRPSTRPRHESRPRA 112
           P P++ P++   A   P  K    ++P  ES+P A
Sbjct: 191 PEPKTEPKSESKAEPKPERKSYSKSKPEPESKPEA 225


>02_03_0152 - 15767985-15768317
          Length = 110

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 753 APYVRARIHRRPGWPRTAWRWRSRDAPRISRG-PPPAVG 640
           A + R    R   WP +   W S + P ++ G P P +G
Sbjct: 35  AEFSRQSTRRHAPWPPSGGHWSSSEPPLVAAGMPSPGLG 73


>02_01_0382 - 2772378-2773544
          Length = 388

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 5   TPRPRSHPRAAQG-APTPPAFKGRPSTRPRHESRPRA 112
           +P P   PR+A G APT P      S R  H+  PRA
Sbjct: 14  SPSPSRLPRSASGKAPTSPPSSSNASRR-HHQQPPRA 49


>12_01_1000 +
           10138260-10138652,10138832-10139017,10139190-10139463,
           10139815-10140065
          Length = 367

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 120 AQTARGRDSWRGRVDGRPLNAGGVGAPCAARGCDRGRGV 4
           A+   G +  RG V GR  +  G GA  AA   +RGRGV
Sbjct: 56  AEGGDGAEGRRGAVTGRRGDFCGGGAAIAAIERERGRGV 94


>11_04_0154 +
          14172294-14172459,14172993-14173054,14174781-14174859,
          14174964-14175164,14175420-14175610
          Length = 232

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +2

Query: 8  PRPRSHPRAAQGAPTP 55
          P PR  PRA QG PTP
Sbjct: 28 PGPRRKPRARQGRPTP 43


>09_01_0006 - 206409-207464
          Length = 351

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 9   HVHGRTPVRRRGHQHHPRL 65
           H++   P RRR HQHH  L
Sbjct: 89  HIYKPPPARRRPHQHHTTL 107


>07_03_1180 -
           24601631-24602142,24602518-24602581,24602811-24602876,
           24602949-24603070,24603170-24603344,24603466-24603701,
           24603781-24604129,24605009-24605146,24605242-24605289
          Length = 569

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
 Frame = +3

Query: 3   APHVHGRTPVRRRGHQHHPRLRGDRQPAP-ATNPDPEPSARTTLTQTDDVVPCVNS---V 170
           AP    +  V ++ +    ++  +  P P    P P+P  + T   TD+V   V+S    
Sbjct: 240 APRASTQKDVTKQSYASVVKVTKEGTPTPPVAKPKPKPKPKPTAKVTDNVEKAVSSPVKP 299

Query: 171 SESQDVTRTNSDDALSNSNLTV 236
           + + D T  N  + L     +V
Sbjct: 300 TNAADTTSPNDKNVLVEQGYSV 321


>03_05_0571 - 25713519-25714064,25714673-25714804
          Length = 225

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 1   PHPTSTVAPPCGAGGTNTT 57
           P P+ST A   GAGGT TT
Sbjct: 77  PCPSSTAAAASGAGGTTTT 95


>03_04_0162 + 17858802-17861168
          Length = 788

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -1

Query: 62  TRVVLVPPAPHGGATVDVG 6
           T +VLV P PHG AT D G
Sbjct: 55  TYIVLVDPPPHGAATDDDG 73


>01_06_1327 +
           36337578-36337976,36338068-36338397,36338523-36338628,
           36338722-36339104
          Length = 405

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/59 (25%), Positives = 27/59 (45%)
 Frame = +3

Query: 81  PAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRTNSDDALSNSNLTVAEDCAND 257
           PAPA  P   PS+       +     V  +S+++   +  SD A+  + L +A   A++
Sbjct: 335 PAPAARPSGVPSSAEAAETENGGAASVKGISKAESSDKACSDAAMLLTKLALARRSADN 393


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,178,119
Number of Sequences: 37544
Number of extensions: 430411
Number of successful extensions: 2757
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 2302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2688
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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