Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6208
(766 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 146 2e-36
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 111 1e-25
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 108 7e-25
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 93 3e-20
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 84 2e-17
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 67 2e-12
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 65 1e-11
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 54 2e-08
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 37 0.004
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 6.8
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 6.8
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 6.8
SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi... 25 9.0
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 146 bits (355), Expect = 2e-36
Identities = 72/118 (61%), Positives = 82/118 (69%)
Frame = +1
Query: 409 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 588
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVI 80
Query: 589 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFIT 762
NFMIQ +SIYG RF DENFKL H G LSMANAG D+NGSQFFIT
Sbjct: 81 PNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFIT 138
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 111 bits (266), Expect = 1e-25
Identities = 57/108 (52%), Positives = 64/108 (59%)
Frame = +1
Query: 439 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 618
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 619 XXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFIT 762
+SIYGE+F DENF LKH G LSMANAG +TNGSQFFIT
Sbjct: 66 TRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFIT 113
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 108 bits (260), Expect = 7e-25
Identities = 62/115 (53%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Frame = +1
Query: 430 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 597
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 598 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFIT 762
M+Q SIYGE+FEDENF+LKH LSMANAG +TNGSQFFIT
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFIT 118
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 93.5 bits (222), Expect = 3e-20
Identities = 58/119 (48%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Frame = +1
Query: 433 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 588
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 589 KNFMIQXXXXXXXXXXXXRSIYGER-FEDENFKLKHYGAGWLSMANAGKDTNGSQFFIT 762
+ FMIQ +I+ R F DENF LKH G LSMANAGKD+NG QFFIT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFIT 123
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 84.2 bits (199), Expect = 2e-17
Identities = 50/101 (49%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Frame = +1
Query: 463 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 642
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGT 65
Query: 643 RSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFIT 762
SIYG++F+DE + L H GAG LSMANAG +TN SQFFIT
Sbjct: 66 -SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFIT 105
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 67.3 bits (157), Expect = 2e-12
Identities = 44/99 (44%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 469 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 648
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQGGDPLGDGTGG-ES 519
Query: 649 IYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFIT 762
I+ + FEDE + LKH +SMAN+G +TNGSQFFIT
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFIT 558
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 64.9 bits (151), Expect = 1e-11
Identities = 44/100 (44%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = +1
Query: 463 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 642
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQGGDPSGTGRGG- 338
Query: 643 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFI 759
+SI+G+ F+DE LKH G +SMAN GK+TNGSQFFI
Sbjct: 339 QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFI 378
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 54.0 bits (124), Expect = 2e-08
Identities = 40/99 (40%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +1
Query: 469 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 648
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQ-GGDPTGTGMGGES 77
Query: 649 IYGERFEDENF-KLKHYGAGWLSMANAGKDTNGSQFFIT 762
IYGE F E +L+ G + MA + N SQFFIT
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFIT 116
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 36.7 bits (81), Expect = 0.004
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Frame = +1
Query: 457 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 636
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 637 XXRSIY-----GERFEDENF--KLKHYGAGWLSMANA---GKDTN----GSQFFIT 762
R ++ G RF F L H G +SM+ A +D GSQF IT
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIIT 118
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -2
Query: 645 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 493
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 6.8
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 455 PIFMSKLTL*VTLG-PLGISSDLALAMNNKIPKAIVRVPMIKTSLVRFL 312
PIF KL + +TLG L ISS + + KA V ++ TS + FL
Sbjct: 3530 PIFQGKLDMAITLGHKLSISSAKLSTICRSVLKASVNSALL-TSWICFL 3577
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 327 FSSFPCYFYKIRFECLFFQNLRY 259
FSSF F+++ F C FF L Y
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLY 33
>SPAC1851.02 |||1-acylglycerol-3-phosphate
O-acyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 283 TFETNFVKIARKRTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKV 435
TF N+ IA+K + V I+G + ++ S +SD I K ++
Sbjct: 119 TFGPNYSVIAKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRM 169
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,022,748
Number of Sequences: 5004
Number of extensions: 60179
Number of successful extensions: 156
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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