Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6207
         (378 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          24   1.6  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    24   2.1  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    22   8.6  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       22   8.6  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = +2

Query: 173 NSNPVLFRKPQYCCELSYKFIKYRM 247
           ++ PV++ +P + C +SY  +  R+
Sbjct: 301 DTQPVMYHEPTFWCSISYYELNLRV 325


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 140 VDTAIYFYYGSNSN 181
           +D  +Y YYG+N N
Sbjct: 167 IDNIMYIYYGTNGN 180


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 282 NLPRPLKVRERDSKKKKNSRGGPVP 356
           ++PRPL  +E     ++  R GP P
Sbjct: 433 SVPRPLPSQEASPSGEQPGRMGPPP 457


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 179 LSSNHNRNKSRCQLGRNYKTFCYKF 105
           LS +++  K  C LGR  +T  Y+F
Sbjct: 282 LSYDNHPCKRACTLGRKPETCYYRF 306


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,479
Number of Sequences: 2352
Number of extensions: 6568
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)