Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6207
         (378 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-137|AAF51470.2|  269|Drosophila melanogaster CG2826-PA ...    30   0.86 
AE014134-1292|AAF52524.2| 1983|Drosophila melanogaster CG6630-PA...    28   3.5  
AE013599-534|AAF59173.2|  403|Drosophila melanogaster CG17853-PA...    27   8.0  

>AE014134-137|AAF51470.2|  269|Drosophila melanogaster CG2826-PA
           protein.
          Length = 269

 Score = 30.3 bits (65), Expect = 0.86
 Identities = 11/47 (23%), Positives = 26/47 (55%)
 Frame = -3

Query: 148 GVNLEEIIKHFAINLQIVFIQIMPVKKFIQCNK*IYKTSMNEVNINK 8
           G+  +++    + + ++  +++ PV K+I  N   +  S NEV +N+
Sbjct: 19  GIRAKDVCPRMSTDKEVCLVELAPVLKYISNNHKSHWNSANEVQVNE 65


>AE014134-1292|AAF52524.2| 1983|Drosophila melanogaster CG6630-PA
            protein.
          Length = 1983

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 89   YEHNLQIYSKMFYNFFQVDTAIYFYY 166
            YEH  Q Y+K+   +F+ D AI F Y
Sbjct: 1915 YEHLTQAYNKIVEMYFEEDHAIEFVY 1940


>AE013599-534|AAF59173.2|  403|Drosophila melanogaster CG17853-PA
           protein.
          Length = 403

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +2

Query: 56  TLNEFLHWHDLYEHNLQIYSKMFYNFFQVDTAIYFYYGSNSNPVLF 193
           T   F++W        Q+Y + F  +F V  AIY    ++S PV++
Sbjct: 169 TYYPFINWR---VDRTQMYIQSFLEYFTVGYAIYVATATDSYPVIY 211


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,265,038
Number of Sequences: 53049
Number of extensions: 280566
Number of successful extensions: 686
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)