Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6201
         (778 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A pro...    30   3.1  
AY142217-1|AAN52145.1| 3803|Drosophila melanogaster transformati...    30   3.1  
AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,...    30   3.1  
AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,...    30   3.1  
AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,...    30   3.1  

>DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A protein.
          Length = 3790

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -2

Query: 438  LIILKLIISMNYSRISTIVISKYKFIGTIIKALYKKGTSLKIV 310
            L++L L +  N   + ++ I K  FIGTI+ +L +K T +KI+
Sbjct: 2245 LLVLSLELIKNRIFVMSVEIRKL-FIGTILVSLIEKSTEVKII 2286


>AY142217-1|AAN52145.1| 3803|Drosophila melanogaster
            transformation/transcription domain-associated protein
            protein.
          Length = 3803

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -2

Query: 438  LIILKLIISMNYSRISTIVISKYKFIGTIIKALYKKGTSLKIV 310
            L++L L +  N   + ++ I K  FIGTI+ +L +K T +KI+
Sbjct: 2258 LLVLSLELIKNRIFVMSVEIRKL-FIGTILVSLIEKSTEVKII 2299


>AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,
            isoform A protein.
          Length = 3805

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -2

Query: 438  LIILKLIISMNYSRISTIVISKYKFIGTIIKALYKKGTSLKIV 310
            L++L L +  N   + ++ I K  FIGTI+ +L +K T +KI+
Sbjct: 2260 LLVLSLELIKNRIFVMSVEIRKL-FIGTILVSLIEKSTEVKII 2301


>AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,
            isoform C protein.
          Length = 3628

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -2

Query: 438  LIILKLIISMNYSRISTIVISKYKFIGTIIKALYKKGTSLKIV 310
            L++L L +  N   + ++ I K  FIGTI+ +L +K T +KI+
Sbjct: 2123 LLVLSLELIKNRIFVMSVEIRKL-FIGTILVSLIEKSTEVKII 2164


>AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,
            isoform B protein.
          Length = 3400

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -2

Query: 438  LIILKLIISMNYSRISTIVISKYKFIGTIIKALYKKGTSLKIV 310
            L++L L +  N   + ++ I K  FIGTI+ +L +K T +KI+
Sbjct: 1895 LLVLSLELIKNRIFVMSVEIRKL-FIGTILVSLIEKSTEVKII 1936


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,113,596
Number of Sequences: 53049
Number of extensions: 634693
Number of successful extensions: 1231
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)