Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6189
         (692 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029915-1|ABM92789.1|  520|Drosophila melanogaster FI01025p pro...    31   1.1  
BT003469-1|AAO39472.1|  523|Drosophila melanogaster RE70568p pro...    31   1.1  
AF109306-1|AAD02889.1|  440|Drosophila melanogaster LIM homeodom...    31   1.1  
AE014134-3038|AAF53756.1|  440|Drosophila melanogaster CG10699-P...    31   1.1  
AE014134-3037|AAF53758.2|  520|Drosophila melanogaster CG10699-P...    31   1.1  
U89162-1|AAC62307.1|  435|Drosophila melanogaster Int6 protein.        29   4.5  
AY122062-1|AAM52574.1|  372|Drosophila melanogaster AT01736p pro...    29   4.5  
AF132551-1|AAD27850.1|  435|Drosophila melanogaster GM01233p pro...    29   4.5  
AE014296-2801|AAF49412.1|  435|Drosophila melanogaster CG9677-PA...    29   4.5  

>BT029915-1|ABM92789.1|  520|Drosophila melanogaster FI01025p
           protein.
          Length = 520

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
 Frame = -3

Query: 582 SQNIIYHKALCFICLLCSLVSTTA--FALNITRKLHKICK---EKTKAEGRIYFD 433
           +Q+ +YH   CF+C +CS    T   F L   RKL  ICK   E+ KA+G +Y D
Sbjct: 197 AQDNVYHLQ-CFLCAMCSRTLNTGDEFYLMEDRKL--ICKRDYEEAKAKG-LYLD 247


>BT003469-1|AAO39472.1|  523|Drosophila melanogaster RE70568p
           protein.
          Length = 523

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
 Frame = -3

Query: 582 SQNIIYHKALCFICLLCSLVSTTA--FALNITRKLHKICK---EKTKAEGRIYFD 433
           +Q+ +YH   CF+C +CS    T   F L   RKL  ICK   E+ KA+G +Y D
Sbjct: 200 AQDNVYHLQ-CFLCAMCSRTLNTGDEFYLMEDRKL--ICKRDYEEAKAKG-LYLD 250


>AF109306-1|AAD02889.1|  440|Drosophila melanogaster LIM homeodomain
           transcriptionfactor protein.
          Length = 440

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
 Frame = -3

Query: 582 SQNIIYHKALCFICLLCSLVSTTA--FALNITRKLHKICK---EKTKAEGRIYFD 433
           +Q+ +YH   CF+C +CS    T   F L   RKL  ICK   E+ KA+G +Y D
Sbjct: 117 AQDNVYHLQ-CFLCAMCSRTLNTGDEFYLMEDRKL--ICKRDYEEAKAKG-LYLD 167


>AE014134-3038|AAF53756.1|  440|Drosophila melanogaster CG10699-PA,
           isoform A protein.
          Length = 440

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
 Frame = -3

Query: 582 SQNIIYHKALCFICLLCSLVSTTA--FALNITRKLHKICK---EKTKAEGRIYFD 433
           +Q+ +YH   CF+C +CS    T   F L   RKL  ICK   E+ KA+G +Y D
Sbjct: 117 AQDNVYHLQ-CFLCAMCSRTLNTGDEFYLMEDRKL--ICKRDYEEAKAKG-LYLD 167


>AE014134-3037|AAF53758.2|  520|Drosophila melanogaster CG10699-PB,
           isoform B protein.
          Length = 520

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
 Frame = -3

Query: 582 SQNIIYHKALCFICLLCSLVSTTA--FALNITRKLHKICK---EKTKAEGRIYFD 433
           +Q+ +YH   CF+C +CS    T   F L   RKL  ICK   E+ KA+G +Y D
Sbjct: 197 AQDNVYHLQ-CFLCAMCSRTLNTGDEFYLMEDRKL--ICKRDYEEAKAKG-LYLD 247


>U89162-1|AAC62307.1|  435|Drosophila melanogaster Int6 protein.
          Length = 435

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 21/61 (34%), Positives = 33/61 (54%)
 Frame = +3

Query: 456 LWFSLYRFCVTFELYSKQKL*WKQVNTVNK*NTVPYDI*CFETRAKHKKQNHGDKMPKNL 635
           L F L  F    E+Y++Q+L    + TVNK N + Y +   +TR   K+ N   +MP+ L
Sbjct: 18  LTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTM---DTR---KRLNLSQEMPEEL 71

Query: 636 L 638
           +
Sbjct: 72  V 72


>AY122062-1|AAM52574.1|  372|Drosophila melanogaster AT01736p
           protein.
          Length = 372

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 21/61 (34%), Positives = 33/61 (54%)
 Frame = +3

Query: 456 LWFSLYRFCVTFELYSKQKL*WKQVNTVNK*NTVPYDI*CFETRAKHKKQNHGDKMPKNL 635
           L F L  F    E+Y++Q+L    + TVNK N + Y +   +TR   K+ N   +MP+ L
Sbjct: 18  LTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTM---DTR---KRLNLSQEMPEEL 71

Query: 636 L 638
           +
Sbjct: 72  V 72


>AF132551-1|AAD27850.1|  435|Drosophila melanogaster GM01233p
           protein.
          Length = 435

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 21/61 (34%), Positives = 33/61 (54%)
 Frame = +3

Query: 456 LWFSLYRFCVTFELYSKQKL*WKQVNTVNK*NTVPYDI*CFETRAKHKKQNHGDKMPKNL 635
           L F L  F    E+Y++Q+L    + TVNK N + Y +   +TR   K+ N   +MP+ L
Sbjct: 18  LTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTM---DTR---KRLNLSQEMPEEL 71

Query: 636 L 638
           +
Sbjct: 72  V 72


>AE014296-2801|AAF49412.1|  435|Drosophila melanogaster CG9677-PA
           protein.
          Length = 435

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 21/61 (34%), Positives = 33/61 (54%)
 Frame = +3

Query: 456 LWFSLYRFCVTFELYSKQKL*WKQVNTVNK*NTVPYDI*CFETRAKHKKQNHGDKMPKNL 635
           L F L  F    E+Y++Q+L    + TVNK N + Y +   +TR   K+ N   +MP+ L
Sbjct: 18  LTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTM---DTR---KRLNLSQEMPEEL 71

Query: 636 L 638
           +
Sbjct: 72  V 72


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,174,066
Number of Sequences: 53049
Number of extensions: 492899
Number of successful extensions: 1202
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)