Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6183
(692 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.48
SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyce... 27 1.9
SPBC18E5.10 |||iron sulfur cluster assembly protein |Schizosacch... 27 2.6
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 27 3.4
SPCC1259.07 |||transcriptional regulatory protein Rxt3 |Schizosa... 26 4.5
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 26 5.9
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.5 bits (63), Expect = 0.48
Identities = 19/77 (24%), Positives = 40/77 (51%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ + +++N S
Sbjct: 2316 ITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTALNTST 2374
Query: 528 SVQITHAFNRCTASRST 578
S+ + N T S+
Sbjct: 2375 SITSSSVLNSSTPITSS 2391
Score = 28.7 bits (61), Expect = 0.84
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ +S +N+S
Sbjct: 540 ITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITRYSVLNSST 598
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 599 PITSSTVLNSSTPITSS 615
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ + S +N+S
Sbjct: 2376 ITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTSITSSSVLNSST 2434
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 2435 PITSSSVLNSSTPITSS 2451
Score = 27.5 bits (58), Expect = 1.9
Identities = 19/77 (24%), Positives = 40/77 (51%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ + + +N+S
Sbjct: 2652 ITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSST 2710
Query: 528 SVQITHAFNRCTASRST 578
+ + A N T S+
Sbjct: 2711 PITSSTALNTSTPITSS 2727
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/77 (23%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ + +++N S
Sbjct: 2724 ITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTALNTST 2782
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 2783 PITSSSVLNSSTPITSS 2799
Score = 27.5 bits (58), Expect = 1.9
Identities = 19/77 (24%), Positives = 40/77 (51%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ + + +N+S
Sbjct: 2880 ITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSST 2938
Query: 528 SVQITHAFNRCTASRST 578
+ + A N T S+
Sbjct: 2939 PITSSTALNTSTPITSS 2955
Score = 27.5 bits (58), Expect = 1.9
Identities = 19/77 (24%), Positives = 40/77 (51%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ + + +N+S
Sbjct: 2976 ITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSST 3034
Query: 528 SVQITHAFNRCTASRST 578
+ + A N T S+
Sbjct: 3035 PITSSTALNTSTPITSS 3051
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +3
Query: 342 VEVNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNN 521
+ + S+ +TP+ ++T T+ ++SS L ++ ST+V+ TS+ + S +N+
Sbjct: 1282 IPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVN-TSTPITSSSVLNS 1340
Query: 522 SDSVQITHAFNRCTASRST 578
S + + N T S+
Sbjct: 1341 STPITSSTVVNSSTPITSS 1359
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/77 (24%), Positives = 40/77 (51%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T T+ ++SS L ++ ST+V+ TS+ + S +N+S
Sbjct: 2352 ITSSTVVNTSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVN-TSTPITSSSVLNSST 2410
Query: 528 SVQITHAFNRCTASRST 578
+ + N T+ S+
Sbjct: 2411 PITSSTVVNTSTSITSS 2427
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/77 (23%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ + +++N S
Sbjct: 1080 ITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTALNTST 1138
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 1139 PITSSSVLNSSTPITSS 1155
Score = 26.6 bits (56), Expect = 3.4
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ + + +N+S
Sbjct: 2508 ITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSST 2566
Query: 528 SVQITHAFNRCTASRST 578
+ A N T S+
Sbjct: 2567 PITSLTALNSSTPITSS 2583
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/77 (23%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ + + +N+S
Sbjct: 1428 ITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSST 1486
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 1487 PITSSTVVNTSTPITSS 1503
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/77 (24%), Positives = 38/77 (49%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T T ++SS L ++ ST+V+ TS+ + S +N+S
Sbjct: 2292 ITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSSVLNSST 2350
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 2351 PITSSTVVNTSTPITSS 2367
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T T+ ++SS L ++ ST+V+ TS+ + S +N+S
Sbjct: 2628 ITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVN-TSTPITSSSVLNSST 2686
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 2687 PITSSTVVNTSTPITSS 2703
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/77 (24%), Positives = 38/77 (49%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T T ++SS L ++ ST+V+ TS+ + S +N+S
Sbjct: 2700 ITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSSVLNSST 2758
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 2759 PITSSTVVNTSTPITSS 2775
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T T+ ++SS L ++ ST+V+ TS+ + S +N+S
Sbjct: 2856 ITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVN-TSTPITSSSVLNSST 2914
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 2915 PITSSTVVNTSTPITSS 2931
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T T+ ++SS L ++ ST+V+ TS+ + S +N+S
Sbjct: 2952 ITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVN-TSTPITSSSVLNSST 3010
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 3011 PITSSTVVNTSTPITSS 3027
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T T+ ++SS L ++ ST+V+ TS+ + S +N+S
Sbjct: 516 ITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVN-TSTPITSSSVLNSST 574
Query: 528 SVQITHAFNRCT 563
+ + N T
Sbjct: 575 PITSSTVVNTST 586
Score = 25.8 bits (54), Expect = 5.9
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T T ++SS L ++ ST+V+ TS+ + + +N+S
Sbjct: 852 ITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSST 910
Query: 528 SVQITHAFNRCTASRST 578
+ + A N T S+
Sbjct: 911 PITSSTALNTSTPITSS 927
Score = 25.8 bits (54), Expect = 5.9
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T T ++SS L ++ ST+V+ TS+ + + +N+S
Sbjct: 1788 ITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSST 1846
Query: 528 SVQITHAFNRCTASRST 578
+ + A N T S+
Sbjct: 1847 PITSSTALNTSTPITSS 1863
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/77 (23%), Positives = 40/77 (51%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++++ T ++SS L ++ ST+V+ TS+ + + +N+S
Sbjct: 1980 ITSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSST 2038
Query: 528 SVQITHAFNRCTASRST 578
+ + A N T S+
Sbjct: 2039 PITSSTALNTSTPITSS 2055
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/77 (23%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ + + +N+S
Sbjct: 3240 ITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSST 3298
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 3299 PITSSTTLNTSTPITSS 3315
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+++ SS P SS+ NS
Sbjct: 768 ITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVLN--SSTPITSSSVLNSS 825
Query: 528 S 530
+
Sbjct: 826 T 826
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/77 (23%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ + + +N+S
Sbjct: 792 ITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSST 850
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 851 PITSSSVLNSSTPITSS 867
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/77 (23%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ + + +N+S
Sbjct: 1380 ITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSST 1438
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 1439 PITSSTVVNTSTPITSS 1455
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/77 (23%), Positives = 39/77 (50%)
Frame = +3
Query: 348 VNSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHPRAFSSMNNSD 527
+ S+ +TP+ ++T+ T ++SS L ++ ST+V+ TS+ + + +N+S
Sbjct: 2220 ITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSST 2278
Query: 528 SVQITHAFNRCTASRST 578
+ + N T S+
Sbjct: 2279 PITSSTVVNTSTPITSS 2295
>SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 610
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 497 KGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLI 676
KG+ D+ F F T S + HR+ +L + K + G + D K K W +G
Sbjct: 289 KGLSHDDVFLFPTGMSAIYNTHRILRLVLD--DSRKSVCFGFCYVDTLKILQK-WGSGCY 345
Query: 677 F 679
F
Sbjct: 346 F 346
>SPBC18E5.10 |||iron sulfur cluster assembly protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 431 GG*SGGWNVLYGICD*GRCS 372
GG GGWN L GI G CS
Sbjct: 303 GGVRGGWNKLVGIFPGGPCS 322
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 169 VGSGLALLLALMKFMGDSNHS-PLGGPYARLPTRAIKNSYSLARLSCVLSASFLTFSIAW 345
VG +ALLL MG + + +P R ++N+ +RLS ASF+ +
Sbjct: 1014 VGKCVALLLLHFDVMGTKHAGRSMDQQAGDIPARLVRNNSDRSRLSDNELASFVKEEVMH 1073
Query: 346 KLIQI 360
++I++
Sbjct: 1074 RIIEL 1078
>SPCC1259.07 |||transcriptional regulatory protein Rxt3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 351
Score = 26.2 bits (55), Expect = 4.5
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +3
Query: 411 PTARSASSCL*ANCMSVCSTIVSETSSHP----RAF-SSMNNSDSVQITHAFNRCTASRS 575
PTA SA S + S ST +S+T+S+P R F S + + D+ + NR AS S
Sbjct: 135 PTATSADSISMESRPSNLSTSLSKTTSYPQFQVRQFVSPIISIDNSALEPFLNRYPASES 194
Query: 576 TF 581
F
Sbjct: 195 LF 196
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.8 bits (54), Expect = 5.9
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 324 FNVLDRVEV--NSNLYAVGTTPLVTNTIQYVPTARSASSCL*ANCMSVCSTIVSETSSHP 497
FNV V + +SNL + ++PL I +A S L A +++ I S SS
Sbjct: 27 FNVSRSVGLISSSNLESCQSSPLEVGNIYNSTSASEILSTLDAKYITIIGVIGSSNSSIQ 86
Query: 498 RAFSSMNNSDS 530
S+ NS++
Sbjct: 87 DLIDSVGNSNN 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,781,357
Number of Sequences: 5004
Number of extensions: 57145
Number of successful extensions: 168
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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