Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6183
(692 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 79 2e-16
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 50 5e-08
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 50 5e-08
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 47 5e-07
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 44 3e-06
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 44 3e-06
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 44 5e-06
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 44 5e-06
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 43 8e-06
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 43 1e-05
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 42 2e-05
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 40 6e-05
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 39 1e-04
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 38 2e-04
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 37 5e-04
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 37 7e-04
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 35 0.003
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 29 0.18
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 23 9.1
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 78.6 bits (185), Expect = 2e-16
Identities = 41/92 (44%), Positives = 55/92 (59%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 589
S RPISLL LGK++E+LL +R+ + I+ QFGFR + S Q+HR+T +I+
Sbjct: 1 SYRPISLLSCLGKIFEKLLESRMALHTFNNNIIPKSQFGFRPSLSTTHQLHRVTNNIV-- 58
Query: 590 LNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
NR TG D KAFD +WH GL+ KL
Sbjct: 59 HNRCNRKSTGLALLDTEKAFDSIWHQGLLSKL 90
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 50.4 bits (115), Expect = 5e-08
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 589
S RPI LL LGK+ ERL+ RL + S G L D Q+GFR S V + R+ + V
Sbjct: 489 SYRPICLLSVLGKILERLIQRRLTTHLESTGGLSDPQYGFRKGRSTVDAITRVMNNGKVA 548
Query: 590 LNRPK 604
L++ +
Sbjct: 549 LDKKR 553
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 50.4 bits (115), Expect = 5e-08
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILV- 586
S RPI LL GK ER++ RL + L D+QFGFR+ S V + R+ + + V
Sbjct: 473 SVRPICLLDGAGKGLERIIVQRLNAHIEEVNGLSDDQFGFRSRRSTVDAIQRVVDIVSVA 532
Query: 587 -GLNRPKPLYTGALFFDVAKAFD 652
NR Y + DV AF+
Sbjct: 533 RSRNRYSGRYCAVVTLDVTNAFN 555
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 47.2 bits (107), Expect = 5e-07
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVS--SKGILIDEQFGFRTNHSCVQQVHRLTE 574
S RP+ +L +LGK+ ERL+ NRL + + S L D QFGFR S V + R+ E
Sbjct: 549 SYRPLCMLDALGKVLERLILNRLNEHLEEPSSPRLSDRQFGFRRGRSTVSAIQRVVE 605
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 44.4 bits (100), Expect = 3e-06
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVS--SKGILIDEQFGFRTNHSCVQQVHRLTE 574
S RPI LL + GK ERLL NRL +++ L ++QFGFR S +Q + ++ +
Sbjct: 498 SFRPICLLDNTGKALERLLLNRLNEYIEDPESPQLSEQQFGFRRGRSTLQAIQQVVD 554
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 44.4 bits (100), Expect = 3e-06
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVS--SKGILIDEQFGFRTNHSCVQQVHRLTE 574
S RP+ +L +LGK+ ERL+ NRL +F+ L D Q+GFR S + + R+ E
Sbjct: 489 SYRPLCMLDALGKVLERLILNRLHEFLEDPESPRLSDRQYGFRRGCSTIGLIQRVVE 545
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 44.0 bits (99), Expect = 5e-06
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 416 RPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTN-HSCVQQVHRLTEHILVGL 592
RP++ L +L K+ ++ +++D + ++ +EQ G R N C QV + + ++VG
Sbjct: 535 RPLTCLSNLNKVLSSVITQKVKDHCDTNNVMTEEQTGRRKNTQGCKDQV--IIDAVIVGQ 592
Query: 593 NRPKPLYTGALFFDVAKAFDKVWHNGLI 676
K + D KA+D V H+ L+
Sbjct: 593 AAKKQRNLDMAYIDYKKAYDSVPHSYLL 620
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 44.0 bits (99), Expect = 5e-06
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSS--KGILIDEQFGFRTNHSCVQQVHRLTE 574
S RP+ +L LGK+ ERL+ NRL +F+ + L Q+GFR S VQ + R+ +
Sbjct: 509 SFRPLGMLNGLGKVLERLILNRLNEFLENGETSHLSPNQYGFRRGKSTVQGILRVVQ 565
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 43.2 bits (97), Expect = 8e-06
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVS--SKGILIDEQFGFRTNHSCVQQVHRLTE 574
S RPI LL + GK+YERLL +R+ D + L + Q+GFR S VQ + + +
Sbjct: 495 SFRPILLLNNPGKVYERLLLSRINDVIEDPESPRLAENQYGFRRGRSTVQAIQLVVD 551
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 42.7 bits (96), Expect = 1e-05
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGI--LIDEQFGFRTNHSCVQQVHRLTE 574
S RP+ +L +LGK+ ERL+ NRL + + L D Q+GFR S + + R+ +
Sbjct: 564 SYRPLCMLDALGKVLERLILNRLNRHIEQQDSPQLSDAQYGFRRGRSTISAIQRVVD 620
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 41.5 bits (93), Expect = 2e-05
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 416 RPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLN 595
RP+ L+ +L K+ E ++ +RL + L D QFGFR S V + + E +
Sbjct: 532 RPLGLVDNLAKVQEMVILDRLTKYTEGPHGLSDRQFGFRKKRSTVDAILAVLEKGIAAFQ 591
Query: 596 RPK--PLYTGALFFDVAKAFD 652
R + Y + DV AF+
Sbjct: 592 RKRCGARYCALITIDVKNAFN 612
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 40.3 bits (90), Expect = 6e-05
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGI--LIDEQFGFRTNHSCVQQVHRLTE 574
S RP+S+L +LGK+ E+L+ NRL + L D Q+GFR S + R+ +
Sbjct: 503 SYRPLSMLDALGKVLEQLILNRLNKHLEDPDSPRLSDAQYGFRRGRSTFSAIQRVVD 559
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 39.1 bits (87), Expect = 1e-04
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNR-LRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTE 574
S RP+ +L +LGK+ ERL+ NR L D S + L D Q+GFR S + + L +
Sbjct: 511 SYRPLCMLDALGKVLERLILNRHLEDPDSPQ--LSDAQYGFRRGRSTISAIQSLVD 564
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 38.3 bits (85), Expect = 2e-04
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGI--LIDEQFGFRTNHSCVQQVHRLTE 574
S RP+ +L +LGK+ E+L+ NRL + + L D Q GFR S + + + E
Sbjct: 556 SYRPLCMLDALGKVLEKLILNRLHNHLEDPAAVRLSDRQHGFRRGRSTIGAIRTVIE 612
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 37.1 bits (82), Expect = 5e-04
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFV--SSKGILIDEQFGFRTNHS---CVQQV 559
S RPI LL + GK +ERLL +RL + + S L + Q+GFR S +QQV
Sbjct: 493 SFRPICLLNNAGKTFERLLLDRLNEHLEDSDNPQLSEYQYGFRLGRSTLLAIQQV 547
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 36.7 bits (81), Expect = 7e-04
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 416 RPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGL- 592
RP++L+ + K+ E L+ NRL + + L D QFGFR S + + + + L
Sbjct: 471 RPLALIDNFAKILEILILNRLVVYTEGEHGLSDRQFGFRKGRSTGEAIAAVLKKRRSALL 530
Query: 593 -NRPKPLYTGALFFDVAKAFD 652
R Y + DV AF+
Sbjct: 531 KKRTGNRYCAIVTIDVKNAFN 551
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 34.7 bits (76), Expect = 0.003
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILV- 586
S+RPI L+ + K ER++ +RL + + L + Q+GFR + + ++
Sbjct: 478 SSRPICLIDGVAKGLERVILHRLNNHIERVQGLSENQYGFRKGRATTDAIEKVLSIASAS 537
Query: 587 -GLNRPKPLYTGALFFDVAKAFD 652
NR + + DV AF+
Sbjct: 538 RARNRGANRFCAVVTLDVKNAFN 560
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 28.7 bits (61), Expect = 0.18
Identities = 28/90 (31%), Positives = 44/90 (48%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 589
S RPISLL + KL +++ RL + GI+ Q + Q V + E + V
Sbjct: 518 SIRPISLLNTDYKLLSKVIKPRLDCIIGKWGIISTAQKCCNKPCNIFQAVLSVKERV-VD 576
Query: 590 LNRPKPLYTGALFFDVAKAFDKVWHNGLIF 679
L + K + FD+++AFD+V G +F
Sbjct: 577 L-KMKRKCGKLVSFDLSQAFDRV-DRGFLF 604
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 23.0 bits (47), Expect = 9.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 162 FNGRQRLGSAPGIDEVHGRQ 221
F GR+ + APGI V G Q
Sbjct: 219 FQGRKGMMGAPGIQGVRGPQ 238
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,449
Number of Sequences: 2352
Number of extensions: 14662
Number of successful extensions: 43
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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