Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6183
(692 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 107 1e-23
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 87 2e-17
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 86 5e-17
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 85 1e-16
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 85 1e-16
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 85 1e-16
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 85 1e-16
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 85 1e-16
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 84 2e-16
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 83 5e-16
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 81 1e-15
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 81 1e-15
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 81 1e-15
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 81 2e-15
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 81 2e-15
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 81 2e-15
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 77 2e-14
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 75 9e-14
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 75 1e-13
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 59 5e-09
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 59 5e-09
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 51 2e-06
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 44 1e-04
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 39 0.006
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 36 0.069
M17120-1|AAA28312.1| 201|Drosophila melanogaster protein ( D.me... 29 6.0
BT022154-1|AAY51549.1| 201|Drosophila melanogaster IP01413p pro... 29 6.0
AL023873-3|CAA19641.1| 201|Drosophila melanogaster EG:125H10.3,... 29 6.0
AE014298-27|AAF45498.1| 201|Drosophila melanogaster CG3796-PA p... 29 6.0
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 107 bits (257), Expect = 1e-23
Identities = 53/101 (52%), Positives = 69/101 (68%)
Frame = +2
Query: 383 PSHKYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVH 562
P + S RPISLL SL KL+ERL+ NRL D ++ + IL D QFGFR HS V+QVH
Sbjct: 504 PGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQVH 563
Query: 563 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
RLT+HIL + + Y A+F D+ +AFD+VWH+GLI K+
Sbjct: 564 RLTKHILQAFDDKE--YCNAVFIDMQQAFDRVWHDGLISKV 602
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 87.0 bits (206), Expect = 2e-17
Identities = 41/92 (44%), Positives = 60/92 (65%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 589
S RPISLL S+ K++ERL+ R+ + ++GI + QFGFR H V+Q+HR+ E IL
Sbjct: 512 SYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTA 571
Query: 590 LNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
+ + Y +LF D+ +AFD+VWH GL K+
Sbjct: 572 YDSKE--YCNSLFLDIREAFDRVWHIGLQLKI 601
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 85.8 bits (203), Expect = 5e-17
Identities = 45/101 (44%), Positives = 59/101 (58%)
Frame = +2
Query: 383 PSHKYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVH 562
P + RS RPISLL L K++ERLL RL K + QFGFR H QQ+
Sbjct: 548 PGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKEHGSEQQIA 607
Query: 563 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL
Sbjct: 608 RVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKL 646
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/101 (43%), Positives = 59/101 (58%)
Frame = +2
Query: 383 PSHKYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVH 562
P + +S RPISLL L K++ERLL RL K + QFGFR H QQ+
Sbjct: 432 PGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIA 491
Query: 563 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL
Sbjct: 492 RVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKL 530
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/101 (43%), Positives = 59/101 (58%)
Frame = +2
Query: 383 PSHKYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVH 562
P + +S RPISLL L K++ERLL RL K + QFGFR H QQ+
Sbjct: 548 PGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIA 607
Query: 563 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL
Sbjct: 608 RVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKL 646
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/101 (43%), Positives = 59/101 (58%)
Frame = +2
Query: 383 PSHKYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVH 562
P + +S RPISLL L K++ERLL RL K + QFGFR H QQ+
Sbjct: 548 PGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIA 607
Query: 563 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL
Sbjct: 608 RVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKL 646
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/101 (43%), Positives = 59/101 (58%)
Frame = +2
Query: 383 PSHKYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVH 562
P + +S RPISLL L K++ERLL RL K + QFGFR H QQ+
Sbjct: 510 PGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIA 569
Query: 563 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL
Sbjct: 570 RVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKL 608
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/101 (43%), Positives = 59/101 (58%)
Frame = +2
Query: 383 PSHKYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVH 562
P + +S RPISLL L K++ERLL RL K + QFGFR H QQ+
Sbjct: 548 PGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIA 607
Query: 563 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL
Sbjct: 608 RVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKL 646
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 84.2 bits (199), Expect = 2e-16
Identities = 44/101 (43%), Positives = 59/101 (58%)
Frame = +2
Query: 383 PSHKYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVH 562
P + +S RPISLL L K++ERLL RL K + QFGFR H QQ+
Sbjct: 560 PGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIA 619
Query: 563 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL
Sbjct: 620 RVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKL 658
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 82.6 bits (195), Expect = 5e-16
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Frame = +2
Query: 392 KYHTIRSN-RPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRL 568
K HT+ S+ RPISLL + KL+E+ L RL + I+ QFGFR +H ++QV+R+
Sbjct: 503 KNHTVASSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRI 562
Query: 569 TEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
T I + Y A+F DV++AFDKVW +GL+FK+
Sbjct: 563 TTEIRTAFEYRE--YCTAVFLDVSQAFDKVWLDGLMFKI 599
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 81.4 bits (192), Expect = 1e-15
Identities = 42/101 (41%), Positives = 56/101 (55%)
Frame = +2
Query: 383 PSHKYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVH 562
P + S RPISLL L KL ER+L RL D S + QFGFR +H Q+
Sbjct: 104 PGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLA 163
Query: 563 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
R+T+ IL + A F D+ +AFD+VWH+GL++KL
Sbjct: 164 RVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKL 202
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 81.4 bits (192), Expect = 1e-15
Identities = 42/101 (41%), Positives = 56/101 (55%)
Frame = +2
Query: 383 PSHKYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVH 562
P + S RPISLL L KL ER+L RL D S + QFGFR +H Q+
Sbjct: 551 PGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLA 610
Query: 563 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
R+T+ IL + A F D+ +AFD+VWH+GL++KL
Sbjct: 611 RVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKL 649
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 81.4 bits (192), Expect = 1e-15
Identities = 42/101 (41%), Positives = 56/101 (55%)
Frame = +2
Query: 383 PSHKYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVH 562
P + S RPISLL L KL ER+L RL D S + QFGFR +H Q+
Sbjct: 551 PGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLA 610
Query: 563 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
R+T+ IL + A F D+ +AFD+VWH+GL++KL
Sbjct: 611 RVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKL 649
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 80.6 bits (190), Expect = 2e-15
Identities = 40/92 (43%), Positives = 56/92 (60%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 589
S RPISLL L KL+E++L R+ + L QFGFR H ++QV+R+T I
Sbjct: 508 SYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTA 567
Query: 590 LNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
+ Y A+F DVA+AFD+VW +GL+FK+
Sbjct: 568 FEHRE--YCTAIFLDVAQAFDRVWLDGLLFKI 597
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 80.6 bits (190), Expect = 2e-15
Identities = 40/92 (43%), Positives = 56/92 (60%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 589
S RPISLL L KL+E++L R+ + L QFGFR H ++QV+R+T I
Sbjct: 508 SYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTA 567
Query: 590 LNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
+ Y A+F DVA+AFD+VW +GL+FK+
Sbjct: 568 FEHRE--YCTAIFLDVAQAFDRVWLDGLLFKI 597
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 80.6 bits (190), Expect = 2e-15
Identities = 42/101 (41%), Positives = 56/101 (55%)
Frame = +2
Query: 383 PSHKYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVH 562
P + S RPISLL L KL ER+L RL D S + QFGFR +H Q+
Sbjct: 551 PGKSPFALNSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLA 610
Query: 563 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
R+T+ IL + A F D+ +AFD+VWH+GL++KL
Sbjct: 611 RVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKL 649
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 77.0 bits (181), Expect = 2e-14
Identities = 39/93 (41%), Positives = 53/93 (56%)
Frame = +2
Query: 404 IRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 583
+ S RPISLL SLGK+ ERL+ NRL + QFGFR H +Q+HR+ L
Sbjct: 314 VDSYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFAL 373
Query: 584 VGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFK 682
+ + Y F D+ +AFD+VWH GL++K
Sbjct: 374 EAMENKE--YAVGAFLDIQQAFDRVWHPGLLYK 404
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 74.9 bits (176), Expect = 9e-14
Identities = 38/93 (40%), Positives = 52/93 (55%)
Frame = +2
Query: 404 IRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 583
+ S RP SLL SLGK+ ERL+ NRL + QFGFR H +Q+HR+ L
Sbjct: 512 VDSYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFAL 571
Query: 584 VGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFK 682
+ + Y F D+ +AFD+VWH GL++K
Sbjct: 572 EAMENKE--YAVGAFLDIQQAFDRVWHPGLLYK 602
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 74.5 bits (175), Expect = 1e-13
Identities = 41/98 (41%), Positives = 56/98 (57%)
Frame = +2
Query: 392 KYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLT 571
K T S RPISLL L KL+E+ L R+ + + L QF F H ++QV+R+T
Sbjct: 43 KDKTQPSYRPISLLTCLSKLFEKGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRIT 102
Query: 572 EHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
I + Y ALF DVA+AFD+VW +GL+FK+
Sbjct: 103 TEIRTAFEHRE--YCTALFLDVAQAFDRVWLDGLMFKI 138
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 59.3 bits (137), Expect = 5e-09
Identities = 33/92 (35%), Positives = 49/92 (53%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 589
S RPISLL L K+ E+L+ RL F+ L Q+GFR + + +L +I
Sbjct: 537 SYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKES 596
Query: 590 LNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
+ + + G + D+ AFD VWH+GL+ KL
Sbjct: 597 IQSKQSV--GLVTLDIEAAFDTVWHDGLLHKL 626
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 59.3 bits (137), Expect = 5e-09
Identities = 33/92 (35%), Positives = 49/92 (53%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 589
S RPISLL L K+ E+L+ RL F+ L Q+GFR + + +L +I
Sbjct: 485 SYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKES 544
Query: 590 LNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
+ + + G + D+ AFD VWH+GL+ KL
Sbjct: 545 IQSKQSV--GLVTLDIEAAFDTVWHDGLLHKL 574
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 50.8 bits (116), Expect = 2e-06
Identities = 30/101 (29%), Positives = 50/101 (49%)
Frame = +2
Query: 383 PSHKYHTIRSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVH 562
P+ I S RPISLL LGK E+++ RL F+ ++ Q F++NHS + +
Sbjct: 503 PNKPPSDINSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALL 562
Query: 563 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
R+ L+ + L D +AFD+V + ++ +L
Sbjct: 563 RIQHFASNALSTKN--HVSILATDFERAFDRVGIHAVLCRL 601
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Frame = +2
Query: 407 RSNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILV 586
RS RP+ LL +GKL+ER+LY R+ S L +Q+GFR S + + +T+
Sbjct: 477 RSYRPLCLLDIVGKLFERILYARIELITESPTGLQGQQYGFRKGKSTLDALKSVTDAARK 536
Query: 587 GLNRPKPL-----YTGALFFDVAKAFD 652
L+ + L Y + DV AF+
Sbjct: 537 ALDGNRWLGGSKKYCAIITLDVKNAFN 563
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 39.1 bits (87), Expect = 0.006
Identities = 24/92 (26%), Positives = 48/92 (52%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 589
S RPISL + K+ ++++ RL V+ ++ D+QFGF+ S ++++
Sbjct: 507 SYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGKS-TSDCLLYVDYLIT- 564
Query: 590 LNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 685
++T + D ++AFD+V + +I +L
Sbjct: 565 ---KSKMHTSLVTLDFSRAFDRVGVHSIIQQL 593
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 35.5 bits (78), Expect = 0.069
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 410 SNRPISLLMSLGKLYERLLYNRLRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 589
S R I LL GK+ E ++ NR+R+ V +G QFGFR CV+ R H+
Sbjct: 511 SYRGICLLPVFGKVLEAIMVNRVRE-VLPEG--CRWQFGFRQGR-CVEDAWR---HVKSS 563
Query: 590 LNRPKPLYTGALFFDVAKAFDKV-WHNGL 673
+ Y F D AFD V W L
Sbjct: 564 VGASAAQYVLGTFVDFKGAFDNVEWSAAL 592
>M17120-1|AAA28312.1| 201|Drosophila melanogaster protein (
D.melanogaster achaetegene encoding nerve
differentiation, complete cds. ).
Length = 201
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 232 VSGYCRP*TSSMPGAEP 182
+S YC+P TS++PGA P
Sbjct: 145 ISSYCKPATSTIPGATP 161
>BT022154-1|AAY51549.1| 201|Drosophila melanogaster IP01413p
protein.
Length = 201
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 232 VSGYCRP*TSSMPGAEP 182
+S YC+P TS++PGA P
Sbjct: 145 ISSYCKPATSTIPGATP 161
>AL023873-3|CAA19641.1| 201|Drosophila melanogaster
EG:125H10.3,FBgn0000022;ac protein.
Length = 201
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 232 VSGYCRP*TSSMPGAEP 182
+S YC+P TS++PGA P
Sbjct: 145 ISSYCKPATSTIPGATP 161
>AE014298-27|AAF45498.1| 201|Drosophila melanogaster CG3796-PA
protein.
Length = 201
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 232 VSGYCRP*TSSMPGAEP 182
+S YC+P TS++PGA P
Sbjct: 145 ISSYCKPATSTIPGATP 161
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,928,308
Number of Sequences: 53049
Number of extensions: 674765
Number of successful extensions: 1579
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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