Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6176
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L29296-1|AAB05645.1|  662|Homo sapiens alpha-adducin protein.          32   2.1  
BX465861-2|CAM25275.1|  662|Homo sapiens adducin 1 (alpha) protein.    32   2.1  
AL390065-1|CAM21297.1|  662|Homo sapiens adducin 1 (alpha) protein.    32   2.1  
AL121750-2|CAM28230.1|  662|Homo sapiens adducin 1 (alpha) protein.    32   2.1  
AM231187-1|CAJ77183.1|  542|Homo sapiens autogenous vein graft r...    31   4.7  
AF381597-1|AAK59356.1|  142|Homo sapiens immunoglobulin heavy ch...    30   8.3  

>L29296-1|AAB05645.1|  662|Homo sapiens alpha-adducin protein.
          Length = 662

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 185 VCCPSSIANILWTTQNSKRKARPRSPTLF 271
           VC PS I N LWT ++  R +    P LF
Sbjct: 492 VCVPSCITNCLWTKEDGHRTSTSAVPNLF 520


>BX465861-2|CAM25275.1|  662|Homo sapiens adducin 1 (alpha) protein.
          Length = 662

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 185 VCCPSSIANILWTTQNSKRKARPRSPTLF 271
           VC PS I N LWT ++  R +    P LF
Sbjct: 492 VCVPSCITNCLWTKEDGHRTSTSAVPNLF 520


>AL390065-1|CAM21297.1|  662|Homo sapiens adducin 1 (alpha) protein.
          Length = 662

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 185 VCCPSSIANILWTTQNSKRKARPRSPTLF 271
           VC PS I N LWT ++  R +    P LF
Sbjct: 492 VCVPSCITNCLWTKEDGHRTSTSAVPNLF 520


>AL121750-2|CAM28230.1|  662|Homo sapiens adducin 1 (alpha) protein.
          Length = 662

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 185 VCCPSSIANILWTTQNSKRKARPRSPTLF 271
           VC PS I N LWT ++  R +    P LF
Sbjct: 492 VCVPSCITNCLWTKEDGHRTSTSAVPNLF 520


>AM231187-1|CAJ77183.1|  542|Homo sapiens autogenous vein graft
           remodeling associated protein 4 protein.
          Length = 542

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 431 KCLFPIIDYLEKRRQLTPRQQLYMFV 354
           KC +  +DYL   R++TP +Q+Y  V
Sbjct: 517 KCYYSYMDYLLPTREITPYEQIYFLV 542


>AF381597-1|AAK59356.1|  142|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 142

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -1

Query: 441 VLWQVFVSHNRLLGKTTTIDAATAIVHVCVSEYLLLEGGQRSDVWRQ 301
           V   V +SHN+   K +++ AA   V+ C +   L  GG   D W Q
Sbjct: 88  VTMSVDMSHNQFSLKLSSVAAADTAVYYCATHQWLEGGGLWFDSWGQ 134


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,997,518
Number of Sequences: 237096
Number of extensions: 1835178
Number of successful extensions: 3548
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3548
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)