Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6173
         (626 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496232-1|AAS77218.1|  211|Homo sapiens truncated alpha-1,4-gal...    31   3.3  
X80818-1|CAA56784.1|  912|Homo sapiens metabotropic glutamate re...    31   4.4  
U92457-1|AAB51762.1|  912|Homo sapiens metabotropic glutamate re...    31   4.4  
BC130528-1|AAI30529.1|  912|Homo sapiens glutamate receptor, met...    31   4.4  
BC130526-1|AAI30527.1|  912|Homo sapiens glutamate receptor, met...    31   4.4  
AL590403-1|CAI17348.1|  912|Homo sapiens glutamate receptor, met...    31   4.4  
AK131536-1|BAD18673.1|  796|Homo sapiens protein ( Homo sapiens ...    31   4.4  
BC009973-1|AAH09973.1|  650|Homo sapiens dihydrouridine synthase...    30   5.8  
BC008362-1|AAH08362.1|  613|Homo sapiens DUS3L protein protein.        30   5.8  
BC004549-1|AAH04549.1|  408|Homo sapiens DUS3L protein protein.        30   5.8  
AL365411-1|CAB96955.1|  465|Homo sapiens hypothetical protein, s...    30   5.8  
AK023958-1|BAB14740.1|  650|Homo sapiens protein ( Homo sapiens ...    30   5.8  

>AY496232-1|AAS77218.1|  211|Homo sapiens truncated
           alpha-1,4-galactosyltransferase protein.
          Length = 211

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -3

Query: 360 TCSTCWGVWV*GWRRGTRPSPLG 292
           TC TCW  W  G   GT P P G
Sbjct: 144 TCWTCWNSWTCGSCSGTHPWPTG 166


>X80818-1|CAA56784.1|  912|Homo sapiens metabotropic glutamate
           receptor type 4 protein.
          Length = 912

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 375 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 274
           +V+R TC TC + +     R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585


>U92457-1|AAB51762.1|  912|Homo sapiens metabotropic glutamate
           receptor 4 protein.
          Length = 912

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 375 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 274
           +V+R TC TC + +     R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585


>BC130528-1|AAI30529.1|  912|Homo sapiens glutamate receptor,
           metabotropic 4 protein.
          Length = 912

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 375 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 274
           +V+R TC TC + +     R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585


>BC130526-1|AAI30527.1|  912|Homo sapiens glutamate receptor,
           metabotropic 4 protein.
          Length = 912

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 375 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 274
           +V+R TC TC + +     R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585


>AL590403-1|CAI17348.1|  912|Homo sapiens glutamate receptor,
           metabotropic 4 protein.
          Length = 912

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 375 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 274
           +V+R TC TC + +     R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585


>AK131536-1|BAD18673.1|  796|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16766 fis, clone BRAWH3013197, highly  similar
           to Metabotropic glutamate receptor 4 precursor. ).
          Length = 796

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 375 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 274
           +V+R TC TC + +     R G RP P+ +L+WGS
Sbjct: 435 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 469


>BC009973-1|AAH09973.1|  650|Homo sapiens dihydrouridine synthase
           3-like (S. cerevisiae) protein.
          Length = 650

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 394 TTCPTK*SAIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 519
           T C    S  VE  +V +N    I L  KKGGGC +MN  +++
Sbjct: 375 TKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 417


>BC008362-1|AAH08362.1|  613|Homo sapiens DUS3L protein protein.
          Length = 613

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 394 TTCPTK*SAIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 519
           T C    S  VE  +V +N    I L  KKGGGC +MN  +++
Sbjct: 338 TKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 380


>BC004549-1|AAH04549.1|  408|Homo sapiens DUS3L protein protein.
          Length = 408

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 394 TTCPTK*SAIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 519
           T C    S  VE  +V +N    I L  KKGGGC +MN  +++
Sbjct: 133 TKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 175


>AL365411-1|CAB96955.1|  465|Homo sapiens hypothetical protein,
           similar to (AF091072.1) predicted protein [Homo sapiens]
           protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 394 TTCPTK*SAIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 519
           T C    S  VE  +V +N    I L  KKGGGC +MN  +++
Sbjct: 358 TKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 400


>AK023958-1|BAB14740.1|  650|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13896 fis, clone THYRO1001703, weakly similar to
           NIFR3-LIKE PROTEIN. ).
          Length = 650

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 394 TTCPTK*SAIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 519
           T C    S  VE  +V +N    I L  KKGGGC +MN  +++
Sbjct: 375 TKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 417


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,106,444
Number of Sequences: 237096
Number of extensions: 2156109
Number of successful extensions: 4875
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4874
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)