Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6165
         (780 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016016-1|AAV36901.1| 1340|Drosophila melanogaster RE21729p pro...    29   5.4  
AF312579-1|AAG41425.1| 1406|Drosophila melanogaster roundabout 2...    29   5.4  
AE014134-252|AAF51375.2| 1463|Drosophila melanogaster CG5481-PA ...    29   5.4  

>BT016016-1|AAV36901.1| 1340|Drosophila melanogaster RE21729p
           protein.
          Length = 1340

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 534 LLHSRNRQGSGTYWCE 581
           ++HSR    +GTYWCE
Sbjct: 29  VIHSRRESDAGTYWCE 44


>AF312579-1|AAG41425.1| 1406|Drosophila melanogaster roundabout 2
           protein.
          Length = 1406

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 534 LLHSRNRQGSGTYWCE 581
           ++HSR    +GTYWCE
Sbjct: 95  VIHSRRESDAGTYWCE 110


>AE014134-252|AAF51375.2| 1463|Drosophila melanogaster CG5481-PA
           protein.
          Length = 1463

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 534 LLHSRNRQGSGTYWCE 581
           ++HSR    +GTYWCE
Sbjct: 152 VIHSRRESDAGTYWCE 167


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,727,903
Number of Sequences: 53049
Number of extensions: 682420
Number of successful extensions: 1340
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)