Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6156
(761 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466... 33 0.33
05_01_0020 + 143273-143592,144278-144371,144466-144537,144675-14... 32 0.57
05_01_0558 - 4880811-4880996,4881098-4881178,4881247-4881393,488... 31 1.0
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 31 1.3
06_02_0346 - 14837982-14838122,14838208-14838327,14838411-148385... 30 1.7
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 30 1.7
05_01_0143 - 944169-947273 30 2.3
12_02_0772 - 23029703-23029715,23029835-23030463,23030637-230316... 29 3.1
03_06_0204 + 32341756-32341843,32341943-32342025,32342690-323427... 29 3.1
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886... 29 4.0
04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962... 29 5.3
03_06_0448 - 34005581-34005655,34005735-34005830,34006669-340076... 29 5.3
01_01_0100 - 755894-756662,757086-757598,758718-761050 29 5.3
09_04_0086 + 14445665-14446683,14448669-14448915 28 7.1
09_04_0085 + 14441123-14443507,14443731-14443787 28 7.1
08_02_0003 + 11180421-11180757,11180773-11185715 28 7.1
08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651 28 7.1
07_01_0376 + 2815419-2815755,2815912-2817659 28 7.1
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 28 7.1
02_02_0233 + 8105765-8107840 28 7.1
10_08_0520 - 18495118-18498237 28 9.3
06_03_1119 + 27760412-27760527,27760851-27761010,27761283-277614... 28 9.3
>01_07_0374 +
43144861-43144998,43145695-43145794,43146499-43146651,
43147383-43150081
Length = 1029
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +3
Query: 342 EHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQ 521
++ T P ++A + +S ++ +I + GI K++ +QIN++Q +
Sbjct: 252 KNTTSAPIDKDNAREEISRLQKEILVMQTEKEFIKSSYESGIAKYWDLEKQINDMQEQVC 311
Query: 522 HFQENF 539
HFQ+ F
Sbjct: 312 HFQDKF 317
>05_01_0020 +
143273-143592,144278-144371,144466-144537,144675-144786,
145179-145327,145484-145510,145931-145981
Length = 274
Score = 31.9 bits (69), Expect = 0.57
Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +3
Query: 66 DKVPEAEDKPLNVVDNLSSEQELIDQA-NTIKDIDNSLRANKKEVIDIPVKVIVEEIKPS 242
+ + +D+ ++++D + QE + ++ N DID + + ++ + +
Sbjct: 159 EDIDSLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEELMGELDALEADMDFESNSVPSY 218
Query: 243 LKSDLEKFEVPDENEEIKRPLVDL-RNPGPPQHQEHETQNPEHHED 377
L+ D E D + E+ P P PP Q++ +P H+ED
Sbjct: 219 LQPDKES----DLDSELNLPAAPTGHTPAPPNRQQNLVLHPFHNED 260
>05_01_0558 -
4880811-4880996,4881098-4881178,4881247-4881393,
4881985-4882029,4882370-4883134
Length = 407
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 297 RPLVDLRNPGPPQHQEHETQNPEHHEDAEK 386
RPL L +P PP Q ET+ E +++E+
Sbjct: 98 RPLPSLASPPPPTQQPQETEEQEQQQESEE 127
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 30.7 bits (66), Expect = 1.3
Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 1/169 (0%)
Frame = +3
Query: 81 AEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLE 260
+E K + + + E D+A T K +++ ++K+ ++ + E++ L
Sbjct: 1592 SELKYMEEIQTMQVETTEKDEALTTKMQEHANLVHEKDALEQQLL----EVRKELNDAYH 1647
Query: 261 KFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 440
+E ++ D E E Q H + E VSS+K + EI +
Sbjct: 1648 TIANQEEQVSVREIKWDAYKKFSEDQLEAEQQ---HVAELEVQVSSLKQQLQETEIHYKH 1704
Query: 441 GFQEVSDGIGKWYARTE-QINELQASLQHFQENFGAQIQKLNETLHFIK 584
++VS +W A E ++EL+A Q+ E QI L + L ++
Sbjct: 1705 KEEQVSLREVQWEADQEHSVSELKAQRQYAAE-LEKQIGALTQQLQLVE 1752
>06_02_0346 -
14837982-14838122,14838208-14838327,14838411-14838564,
14838793-14838866,14838962-14839095,14839207-14839326,
14843174-14843308,14843842-14843976,14844343-14845003,
14845103-14845264,14845348-14845510,14880834-14881021
Length = 728
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +3
Query: 198 IDIPVKVIVEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHED 377
IDIP + I++ P+++ L F VP+ L+ L + EH TQ H+D
Sbjct: 476 IDIPTQGIIQPTAPAVEPALPDFGVPN-------TLLALTAYVQDETAEHNTQGDSSHDD 528
Query: 378 AEKIVSSVKND 410
+ + S+ D
Sbjct: 529 DDNLSHSLPPD 539
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 30.3 bits (65), Expect = 1.7
Identities = 46/215 (21%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Frame = +3
Query: 81 AEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLE 260
AE+K + V + EL +++K+++ S + + I +++ K SL S+L+
Sbjct: 424 AEEKEMLVSKHSKCLTELEKAQSSVKELE-STNGDLNDKI-----AVLQNEKNSLSSELQ 477
Query: 261 KFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 440
+ E EN L N Q E + +++ED E + S+++ND+ T + +
Sbjct: 478 QLEASFEN---------LGND-LEQELERISIMHKNNEDLELVNSNLQNDLATVQGQKNE 527
Query: 441 GFQEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNE-TLHFIKPADTIAAPSVE 617
+ K + +QI+ LQ ++++ + A+ NE T+H + T + +E
Sbjct: 528 AVASTLELGNKLEEKNQQISNLQEAVENLE---AAKTNMYNEVTVH--QEKCTFLSSQLE 582
Query: 618 ETQ-NKASFETIESGLKSLETNFNSGLNQLSEGIQ 719
+ Q + +T+ S ++ ++ N N L++ ++ ++
Sbjct: 583 KAQLAEKEVQTLLSEIEKMK-NENLMLSRENDNLK 616
>05_01_0143 - 944169-947273
Length = 1034
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +3
Query: 372 EDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENF 539
E+A++ +S ++ +I + G+ K++ +QIN++Q + +FQE F
Sbjct: 130 ENAQEEISRLQKEILVLQTQKEFLKSSYESGMAKYWDLEKQINDMQEEVCYFQEEF 185
>12_02_0772 -
23029703-23029715,23029835-23030463,23030637-23031673,
23031830-23032166
Length = 671
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 69 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVI 200
++ +DK L+ +D + E ID+ I ++D L +K+ +
Sbjct: 10 RIASRDDKSLSCIDKQKGKNEDIDELEDIAEVDKQLERYQKDTL 53
>03_06_0204 +
32341756-32341843,32341943-32342025,32342690-32342765,
32342876-32342943,32343001-32343045,32343308-32343392,
32344270-32344385,32344497-32344580,32345394-32345540,
32345845-32345956,32346027-32346146,32346338-32346411
Length = 365
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 336 HQEHETQNPEHH---EDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQIN 500
H+ + Q + H EDAEK+V SVK + E G +V G ++ +N
Sbjct: 152 HEHEDEQKKQEHTFNEDAEKMVKSVKQAMENGEGCRVYGVLDVQRVAGNFHISVHGLN 209
>08_02_0095 - 12285976-12286037,12286111-12287229,12287494-12288604,
12288695-12288757,12288851-12288913,12289268-12289318,
12289538-12289617,12290078-12290164,12290349-12290435,
12290889-12290975,12292106-12292308,12292756-12292922
Length = 1059
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +3
Query: 84 EDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLEK 263
+D + + + EQE Q I+D D AN K + IVE+I S K +E+
Sbjct: 954 QDSGIEIANAEQQEQEKDVQEEHIEDPDT---ANTKGRKPKRYRRIVEKIIESSKKKIEE 1010
Query: 264 FEVPDENEEIKRP 302
E +EN+ RP
Sbjct: 1011 QEDAEENQNKARP 1023
>04_03_0024 -
9623178-9624001,9624502-9624678,9625144-9625305,
9625520-9626032,9626801-9629153
Length = 1342
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/44 (22%), Positives = 24/44 (54%)
Frame = +3
Query: 69 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVI 200
++ +DK L+ +D ++E ID+ I ++D L +++ +
Sbjct: 10 RIASRDDKSLSCIDKQKGKKEDIDELEDIAEVDKQLERYQRDTL 53
>03_06_0448 - 34005581-34005655,34005735-34005830,34006669-34007616,
34007684-34007851,34007908-34008099,34008164-34008346,
34008414-34008590,34008667-34012074
Length = 1748
Score = 28.7 bits (61), Expect = 5.3
Identities = 24/100 (24%), Positives = 44/100 (44%)
Frame = +3
Query: 66 DKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSL 245
DK+P+ + ++ N++S + +A D D L KK+ D+P +V+ E
Sbjct: 897 DKIPQPLENAISD-SNMTSVFSGVPEAENA-DTDKGLFLAKKDSEDMPKEVVGAEGSQQD 954
Query: 246 KSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPE 365
+ EV DE+ E+ L P H + + + P+
Sbjct: 955 QFTTSTHEVVDEHNEVAEVEPVLAEPN--MHGQCDGEKPD 992
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/44 (22%), Positives = 24/44 (54%)
Frame = +3
Query: 69 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVI 200
++ +DK L+ +D ++E ID+ I ++D L +++ +
Sbjct: 10 RIASRDDKSLSCIDKQKGKKEDIDELEDIAEVDKQLERYQRDTL 53
>09_04_0086 + 14445665-14446683,14448669-14448915
Length = 421
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/44 (22%), Positives = 23/44 (52%)
Frame = +3
Query: 69 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVI 200
++ +DK L+ +D + E ID+ I ++D L +++ +
Sbjct: 351 RIASRDDKSLSCIDKQKGKNEDIDELEDIAEVDKQLERYQRDTL 394
>09_04_0085 + 14441123-14443507,14443731-14443787
Length = 813
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/44 (22%), Positives = 23/44 (52%)
Frame = +3
Query: 69 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVI 200
++ +DK L+ +D + E ID+ I ++D L +++ +
Sbjct: 10 RIASRDDKSLSCIDKQKGKNEDIDELEDIAEVDKQLERYQRDTL 53
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/44 (22%), Positives = 23/44 (52%)
Frame = +3
Query: 69 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVI 200
++ +DK L+ +D + E ID+ I ++D L +++ +
Sbjct: 10 RIASRDDKSLSCIDKQKGKNEDIDELEDIAEVDKQLERYQRDTL 53
>08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651
Length = 642
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/44 (22%), Positives = 23/44 (52%)
Frame = +3
Query: 69 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVI 200
++ +DK L+ +D + E ID+ I ++D L +++ +
Sbjct: 10 RIASRDDKSLSCIDKQKGKNEDIDELEDIAEVDKQLERYQRDTL 53
>07_01_0376 + 2815419-2815755,2815912-2817659
Length = 694
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/44 (22%), Positives = 23/44 (52%)
Frame = +3
Query: 69 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVI 200
++ +DK L+ +D + E ID+ I ++D L +++ +
Sbjct: 10 RIASRDDKSLSCIDKQKGKNEDIDELEDIAEVDKQLERYQRDTL 53
>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/84 (21%), Positives = 43/84 (51%)
Frame = +3
Query: 42 AARAASIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVI 221
A +A+ D++ + + ++ + + +ELI + + DNS + + V D
Sbjct: 1146 AGHSAAAQDELVKEGKEKMSADHSTAPPKELIKEGEENMNTDNSAAVHVEPVADEK---- 1201
Query: 222 VEEIKPSLKSDLEKFEVPDENEEI 293
+E+ +P + D E+ E+ +++EE+
Sbjct: 1202 MEDEEPDYEEDPEEVELYEDDEEM 1225
>02_02_0233 + 8105765-8107840
Length = 691
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 363 EHHEDAEKIVSSVKNDINTAEIALRQ--GFQEVSDGIGKWYARTEQ 494
EH KI+ ++ D+ + ++LR + +D G W R EQ
Sbjct: 426 EHRSSTAKIIGFIRKDLTSGWVSLRSVADHRRFNDRRGHWTLRREQ 471
>10_08_0520 - 18495118-18498237
Length = 1039
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 405 NDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASL 518
+D+N + + LR+G + + D + W A E NE A L
Sbjct: 476 SDLNKSRV-LRKGLEHIPDSVRLWKAVVELANEEDARL 512
>06_03_1119 +
27760412-27760527,27760851-27761010,27761283-27761449,
27761525-27761629,27762097-27762864,27762942-27763131,
27763763-27763940,27764106-27764497
Length = 691
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 375 DAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFG 542
+ E I S++ +++ E+ALRQ G WY R +N+ A + F+ FG
Sbjct: 78 EPEAIKSAIDDELRVVEVALRQN----PKSYGAWYHRKWLLNQKLAPVD-FKCEFG 128
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,981,519
Number of Sequences: 37544
Number of extensions: 345599
Number of successful extensions: 1358
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -