Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6150
         (539 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0383 - 3405986-3407359,3409283-3410827                           29   2.4  
10_05_0096 - 9144683-9145270                                           28   5.5  
08_02_0301 - 15503184-15504773,15504790-15504873                       28   5.5  
02_05_0259 - 27226378-27226398,27226643-27226813,27227063-272272...    27   7.2  
06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315     27   9.6  

>08_01_0383 - 3405986-3407359,3409283-3410827
          Length = 972

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 219 SILEKLFWLHRAGGTSSWSLT*EWKYQ 139
           S+ + +FW  R GG  SW +   WK Q
Sbjct: 659 SMGDDVFWAIRGGGGGSWGVVYAWKLQ 685



 Score = 27.1 bits (57), Expect = 9.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 222 ASILEKLFWLHRAGGTSSWSLT*EWKYQ 139
           A + E +FW  R GG  +W     W+ Q
Sbjct: 215 AGMGEDVFWAIRGGGGGTWGAVYAWRIQ 242


>10_05_0096 - 9144683-9145270
          Length = 195

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -2

Query: 361 IKYITSLSYHCT-AEGARGDPTNLCR 287
           +  +T    HC  AEG RG P+ LCR
Sbjct: 161 VAQLTDALIHCANAEGNRGTPSQLCR 186


>08_02_0301 - 15503184-15504773,15504790-15504873
          Length = 557

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 222 ASILEKLFWLHRAGGTSSWSLT*EWK 145
           +S+ E +FW  R GG   W +   WK
Sbjct: 230 SSMGENVFWAIRGGGGGGWGVVYAWK 255


>02_05_0259 -
           27226378-27226398,27226643-27226813,27227063-27227284,
           27227508-27227668,27227933-27227996,27228002-27228194,
           27228499-27228587,27228668-27228852,27229671-27229779,
           27229880-27229936,27230023-27230175
          Length = 474

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 164 LHELVPPARCNQNSFSRILAGRTHKKETQMNYC 262
           +H +  P  C  +S S I  G+ H+++ +  YC
Sbjct: 385 IHGIDDPLICGSSSDSGIGRGKRHRRDVRSEYC 417


>06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315
          Length = 678

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 222 ASILEKLFWLHRAGGTSSWSLT*EWK 145
           A++ E LFW  R GG  S+ +   WK
Sbjct: 219 AAMGEDLFWAIRGGGGESFGIVVSWK 244


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,809,055
Number of Sequences: 37544
Number of extensions: 301738
Number of successful extensions: 584
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)