Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6150
         (539 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   0.65 
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   3.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.1  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 433 IVGEHSWSLRVNRDVTTMSGTSSCSVCLVPKF 528
           +VGEH WS +   + T +   +   V + PK+
Sbjct: 216 VVGEHDWSSKTETNATVLHSIN--KVIIHPKY 245


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 158 PKSGNTNFTRADFGTDHPP 102
           P  G+ NF+ A   T+H P
Sbjct: 303 PTPGSFNFSMAALATEHTP 321


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +1

Query: 64  RCNYTETLELISQGGWS 114
           RCN T     I   GWS
Sbjct: 363 RCNATGAFSWIGSDGWS 379


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 387 LCTRYPYCLNKGNV 428
           LC    Y  NKGN+
Sbjct: 153 LCNHIKYSTNKGNI 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,086
Number of Sequences: 438
Number of extensions: 3574
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)