Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6149
(708 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 48 2e-06
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 46 7e-06
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 45 9e-06
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 33 0.030
SPBC25B2.11 |pof2||F-box protein Pof2|Schizosaccharomyces pombe|... 32 0.070
SPAC4G8.07c |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual 30 0.28
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.37
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.1
SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1 ... 28 1.5
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 27 2.0
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 27 2.6
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 27 2.6
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.6
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 27 3.5
SPBC146.11c |mug97|meu33|meiotically upregulated gene Mug97|Schi... 26 4.6
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 26 4.6
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 26 6.1
SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces ... 26 6.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 6.1
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 26 6.1
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 26 6.1
SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|ch... 25 8.0
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 47.6 bits (108), Expect = 2e-06
Identities = 25/96 (26%), Positives = 51/96 (53%)
Frame = +1
Query: 112 CLNYFTRWNETDQVEFVEQLLARMCHYQHGHINAYLKPMLQRDFISMLPKKGLDHVAENI 291
CLN + +E ++++ + LLA + + +++ +L DF + P++ V+ +
Sbjct: 31 CLNPLS--HENNRIDLIRDLLASLSKEGVVAVYNHVRSLLFTDFTEVFPEE----VSLRV 84
Query: 292 LSYLDASSLCAAELVCREWLRVISEGMLWKKLIERK 399
SYLD LC +L+ + W R++ + +WK L +K
Sbjct: 85 FSYLDQLDLCKCKLMSKRWKRLLEDPGIWKALYMQK 120
Score = 33.1 bits (72), Expect = 0.040
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Frame = +1
Query: 523 IIKDIQSIEDNWRMGKHNLQRINCRS----------ENSKGVYCLQYDDHKIVSGLRDNT 672
+ K+ ++ NWR G+ + N S VYC+QYDD +VSG +D T
Sbjct: 183 LYKEHAHLDSNWRHGRFLVSTFNNPSIRFPADQDFRATLDSVYCVQYDDEIMVSGSKDRT 242
Query: 673 L 675
+
Sbjct: 243 V 243
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 604 NSKGVYCLQYDDHKIVSGLRDNTLK 678
+ +G+ C QY+ IVSG D T++
Sbjct: 388 HQRGIACAQYNGKFIVSGSSDLTIR 412
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 45.6 bits (103), Expect = 7e-06
Identities = 38/180 (21%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Frame = +1
Query: 115 LNYFTRWNETDQVEFVEQLLARMCHYQHGHINAYLKPMLQRDFISMLPKKGLDHVAENIL 294
++ F + E+ + + LL+R + +I+ L P+ Q++F++ P + + +L
Sbjct: 258 ISSFEKLPESVRQYLLFHLLSRCGKHAVQNIHKILLPIFQKNFLTGFPAE----ITNLVL 313
Query: 295 SYLDASSLCAAELVCREWLRVISEG-MLWKKLIERKVRTDSLWRGLAERRGWIQYLFKPK 471
++LDA SLCA V W +++S LWK L ++ W + + + L +
Sbjct: 314 THLDAPSLCAVSQVSHHWYKLVSSNEELWKSLF---LKDGFFWDSI-DSKIRTMCLEQSL 369
Query: 472 PGCQHPSHSFYRQLYPKIIKDIQSIEDNWRMGKHNLQRINCRSENSKGVYCLQYDDHKIV 651
C ++R ++ + W ++R + + + LQ+DD KI+
Sbjct: 370 SACAIMKRVYFRHF---------NLRERWLHAPEKIKRCSFPIHGVRLITKLQFDDDKII 420
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 45.2 bits (102), Expect = 9e-06
Identities = 20/62 (32%), Positives = 38/62 (61%)
Frame = +1
Query: 217 LKPMLQRDFISMLPKKGLDHVAENILSYLDASSLCAAELVCREWLRVISEGMLWKKLIER 396
L +++ DF+S+LP + ++ ILS+LDA SLC A V + W + + ++W ++ E+
Sbjct: 101 LDSLVRLDFLSLLPVE----ISFRILSFLDARSLCQAAQVSKHWKELADDDVIWHRMCEQ 156
Query: 397 KV 402
+
Sbjct: 157 HI 158
Score = 33.1 bits (72), Expect = 0.040
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 580 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTLKFGTER 693
Q++ +S GV CLQ+D K++SG D T++ R
Sbjct: 304 QQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRIWNYR 341
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 33.5 bits (73), Expect = 0.030
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 289 ILSYLDASSLCAAELVCREWLRVISEGMLWK 381
I S+LD SL +A+ C+ W +++S+ + W+
Sbjct: 42 IFSFLDPRSLLSAQCTCKYWKKLLSDDLSWR 72
>SPBC25B2.11 |pof2||F-box protein Pof2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 32.3 bits (70), Expect = 0.070
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 271 DHVAENILSYLDASSLCAAELVCREWLRVISEGMLWKKLI 390
+ V NILSYL+A L VC W I LW+K++
Sbjct: 5 NEVCFNILSYLEADELRCKSTVCTSWRNFIIP-TLWEKVV 43
>SPAC4G8.07c |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 30.3 bits (65), Expect = 0.28
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 514 YPKIIKDIQSIEDNWRMGKHNLQRINCRSENSKGVYCLQYDDHKIV 651
YPKII+D+QS + ++ G L R S G +C+ DHK++
Sbjct: 287 YPKIIEDVQSRANTFKRGATILMR---DSATEDGKHCV-ITDHKMI 328
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.37
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 91 YAAERDACLNYFTRWNETDQVEFVEQLLARMCH 189
++ E D CL F+ NETD +F +++L + CH
Sbjct: 97 HSFELDKCLAGFSFANETDAQKFYKKVLDKGCH 129
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = -3
Query: 418 TANPYGPSSRSVSSTASLPISPS-TTRGK-PTRPHIESSRPGTIV-CSL 281
T N + SS SST+S PIS S ++ G P++ + S+ G +V CS+
Sbjct: 201 TTNNWNSSSSFTSSTSSTPISSSYSSSGTLPSKSNKSSNHVGVVVGCSV 249
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -3
Query: 421 ATANPYGPSSRSVSSTASLPISPSTTRGKPTRPHIESSRPGTIVCSLRHGPGL 263
A+++ G SS S+S ++S+P S S+ SS + + R GP +
Sbjct: 132 ASSSSSGMSSSSLSHSSSVPSSSSSYHSSSMTTSGLSSSASIVSSTYRDGPSI 184
>SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 7/38 (18%)
Frame = -1
Query: 438 PLGEAAPQRIRTDLPLD-------QFLPQHPFRYHPQP 346
PL E +R+ TD+PL+ F+P+ P++ HP P
Sbjct: 377 PLAELYYKRMATDVPLNFQATKAPDFVPEGPWKSHPLP 414
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -3
Query: 535 CPLLSWDIVVCRMSVTDVGSRASV*TGTVSIPSARRGRATANPYGP 398
C L + +V + D+ S V IP RRGR P GP
Sbjct: 259 CTLAEAEFMVAKRPFPDLESALVVKQPRPVIPKGRRGRREKTPLGP 304
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 598 SENSKGVYCLQYDDHKIVSGLRDNTLKFGTER 693
S K VY L YD + GL+ TL GT R
Sbjct: 169 SNAKKSVYPLYYDSATVKKGLKSGTLFKGTLR 200
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -2
Query: 365 SDITLNHSRQTNSAAHRELASRYDSMFSATWSRPFLGSILMKSLCSI 225
+D+T H + +SA +E ASR +++ + P L +L + LCS+
Sbjct: 481 ADVT--HFVKPDSALDKEAASRATTVYLVQKAIPMLPPLLCERLCSL 525
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 27.1 bits (57), Expect = 2.6
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +1
Query: 4 KKIEDTIPPQVTSLTSLDSGVRPVPSSPAYAAER--DACLNYFTRWNETD-QVEFVEQLL 174
KK PPQ T S D+ + PS+PA A ++ +A + TD Q E ++LL
Sbjct: 171 KKETAAPPPQETPTKSADAELAKTPSAPAAALKKAAEAAEPATVTEDATDLQNEVDQELL 230
Query: 175 ARMCHYQHGHI 207
M +H +I
Sbjct: 231 KDMYGKEHVNI 241
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = -3
Query: 490 TDVGSRASV*TGTVSIPSARRGRATANPYGPSSRSVSSTASLPISPSTTRG 338
TD S AS T +VS + A + +S SVSS+AS SP+ G
Sbjct: 250 TDDSSSASSATSSVSSVVSSASSALSASASSASASVSSSASSDASPALKTG 300
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 632 YCKQYTPLEFSDLQFILCKLCFPILQLSSIDCMSFIILGYSCL*N-ECDGCWQPGF 468
YC + L F DLQ C +C + LS + ++G+S C C + GF
Sbjct: 44 YCGKDRNLRFPDLQ---CSVCLNMFHLSCLSPPCTSMMGFSTNYQFVCKHCTEDGF 96
>SPBC146.11c |mug97|meu33|meiotically upregulated gene
Mug97|Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 26.2 bits (55), Expect = 4.6
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Frame = +1
Query: 178 RMCHYQHGHINAYLKPMLQRDFISMLPKKGLDHVAEN------ILSYLDASSLCAAELVC 339
R+C Y H H + + P + D ++ +EN +L + C L
Sbjct: 169 RVCLY-HKHYSRWYLPFDKDDDNQLVEAYAKYFSSENRPSIFYVLQGISFGPECEYVLRR 227
Query: 340 REWLRVISEGMLWKKLIERKVRTDSLWRGLAER 438
+ W +E ++ ++++ERK+ T R +AER
Sbjct: 228 KHWWNPWAEKVMRREIVERKIDTHPGCRTVAER 260
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 26.2 bits (55), Expect = 4.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 396 PLDQFLPQHPFRYHPQPLAANQLGRT 319
P+DQF +HP H QP A L T
Sbjct: 668 PVDQFYLKHPILIHTQPNAELTLDLT 693
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 57 QRRQTGAQQPCVRGGKGRMPQLL 125
+++QT ++P VRG +GR P L
Sbjct: 116 KKKQTKQKKPSVRGRRGRKPSSL 138
>SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 805
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 298 YLDASSLCAAELVCREWLRVISEGMLWKKLIERKVRTDSL 417
YL + AA L+C WL ++ +LW++ + + SL
Sbjct: 620 YLQVGLVIAA-LICVPWLLIVKPFVLWRRHSNEENKYQSL 658
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 6.1
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -3
Query: 496 SVTDVGSRASV*TGTVSIPSARRGRAT-ANPYGPSSRSVSSTASLPISPSTTRGKPTRPH 320
S+T + +S T + S+ S+ T A+P S S S+T+S S STT
Sbjct: 74 SLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSS 133
Query: 319 IESS 308
I SS
Sbjct: 134 ITSS 137
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 483 TSVTLILQTTISQDNKGHTIYRGQLENGKT*FTEDKLQIGE 605
T + I + +SQ KG+TI+ G+L+N F E + I +
Sbjct: 416 TRLNTIQRAVVSQAKKGYTIF-GRLQNVLHDFVEGETSISK 455
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 460 TGTVSIPSARRGRATANPYGPSSRSVSSTASLPIS 356
T +IPS+ R+ PY PS R S A L S
Sbjct: 98 TSYQAIPSSSSNRSRGGPYTPSIRDDSLLALLSFS 132
>SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 632
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 430 RGRATANPYGPSSRSVSSTASLPISPSTTRGKPTRPHI 317
RGR T YGP+S +S S P P + + T P I
Sbjct: 138 RGRNTVTFYGPTSIFGTSFTSSPRPPPSASIEDTYPII 175
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,276,112
Number of Sequences: 5004
Number of extensions: 76269
Number of successful extensions: 323
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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